Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:19:51 (15563): wrapper (7.7.26015): starting
20:19:51 (15563): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 20:19:51] Arguments: --nthreads 12
[2025-12-13 20:19:51] Threads: 12
[2025-12-13 20:19:51] Checking for CVMFS
[2025-12-13 20:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:19:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:19:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:19:52] 2.11.2.0 3103 102908 99276 153979 0 56 16090674 20275200 1 130560 0 44604133 99.928 5410894 33007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 20:19:52] CVMFS is ok
[2025-12-13 20:19:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:19:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:19:52] Further information can be found at the LHC@home message board.
[2025-12-13 20:19:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:19:52] Checking for apptainer binary...
[2025-12-13 20:19:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:19:52] Running /usr/bin/apptainer --version
[2025-12-13 20:19:52] apptainer version 1.3.2-1.el7
[2025-12-13 20:19:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:19:53] c-115-41.aglt2.org
[2025-12-13 20:19:53] apptainer works
[2025-12-13 20:19:53] Set ATHENA_PROC_NUMBER=12
[2025-12-13 20:19:53] Set ATHENA_CORE_NUMBER=12
[2025-12-13 20:19:53] Starting ATLAS job with PandaID=6929344135
[2025-12-13 20:19:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:29:27]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:29:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 21:29:27]  replicas=None
[2025-12-13 21:29:27]  scope=mc23_13p6TeV
[2025-12-13 21:29:27]  status=None
[2025-12-13 21:29:27]  status_code=0
[2025-12-13 21:29:27]  storage_token=
[2025-12-13 21:29:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929344135/log.47886831._006255.job.log.tgz.1
[2025-12-13 21:29:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/5c/log.47886831._006255.job.log.tgz.1
[2025-12-13 21:29:27]  workdir=None
[2025-12-13 21:29:27] ]
[2025-12-13 21:29:27] 2025-12-14 02:29:00,637 | INFO     | transferring file log.47886831._006255.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929344135/log.47886831._006255.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 21:29:27] 2025-12-14 02:29:00,637 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929344135/log.47886831._006255.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._006255.job
[2025-12-13 21:29:27] 2025-12-14 02:29:00,660 | INFO     | adding to output.list: log.47886831._006255.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/5c/log.47886831._006255.job.log.tg
[2025-12-13 21:29:27] 2025-12-14 02:29:00,661 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 21:29:27] 2025-12-14 02:29:00,661 | INFO     | summary of transferred files:
[2025-12-13 21:29:27] 2025-12-14 02:29:00,661 | INFO     |  -- lfn=log.47886831._006255.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 21:29:27] 2025-12-14 02:29:00,662 | INFO     | stage-out finished correctly
[2025-12-13 21:29:27] 2025-12-14 02:29:01,235 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 21:29:27] 2025-12-14 02:29:01,456 | INFO     | time since job start (4133s) is within the limit (174528.0s)
[2025-12-13 21:29:27] 2025-12-14 02:29:01,639 | INFO     | monitor loop #310: job 0:6929344135 is in state 'finished'
[2025-12-13 21:29:27] 2025-12-14 02:29:01,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:29:27] 2025-12-14 02:29:01,658 | INFO     | job 6929344135 has state=finished
[2025-12-13 21:29:27] 2025-12-14 02:29:01,658 | INFO     | preparing for final server update for job 6929344135 in state='finished'
[2025-12-13 21:29:27] 2025-12-14 02:29:01,659 | INFO     | this job has now completed (state=finished)
[2025-12-13 21:29:27] 2025-12-14 02:29:01,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 21:29:27] 2025-12-14 02:29:01,659 | INFO     | log transfer has been attempted: DONE
[2025-12-13 21:29:27] 2025-12-14 02:29:01,659 | INFO     | job 6929344135 has finished - writing final server update
[2025-12-13 21:29:27] 2025-12-14 02:29:01,660 | INFO     | total number of processed events: 400 (read)
[2025-12-13 21:29:27] 2025-12-14 02:29:01,661 | INFO     | executing command: lscpu
[2025-12-13 21:29:27] 2025-12-14 02:29:01,688 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 21:29:27] 2025-12-14 02:29:03,462 | INFO     | time since job start (4135s) is within the limit (174528.0s)
[2025-12-13 21:29:27] 2025-12-14 02:29:03,462 | INFO     | 4137s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-13 21:29:27] 2025-12-14 02:29:04,142 | INFO     | monitor loop #311: job 0:6929344135 is in state 'finished'
[2025-12-13 21:29:27] 2025-12-14 02:29:04,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:29:27] 2025-12-14 02:29:05,468 | INFO     | time since job start (4137s) is within the limit (174528.0s)
[2025-12-13 21:29:27] 2025-12-14 02:29:06,645 | INFO     | monitor loop #312: job 0:6929344135 is in state 'finished'
[2025-12-13 21:29:27] 2025-12-14 02:29:06,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,379 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 21:29:27] 2025-12-14 02:29:07,383 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-12-13 21:29:27] 2025-12-14 02:29:07,386 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929344135/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,387 | INFO     | extracted standard info from prmon json
[2025-12-13 21:29:27] 2025-12-14 02:29:07,387 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:29:27] 2025-12-14 02:29:07,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:29:27] 2025-12-14 02:29:07,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:29:27] 2025-12-14 02:29:07,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | sum of square deviations: 70364110.0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | sum of deviations: -3134919320.0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | mean x: 1765677371.0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | mean y: 2884338.868852459
[2025-12-13 21:29:27] 2025-12-14 02:29:07,390 | INFO     | intersect: 78668785225.48146
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | chi2: 0.09591962581194653
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | current memory leak: -44.55 B/s (using 61 data points, chi2=0.10)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | could have reported an average CPU frequency of 2163 MHz (6 samples)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | ..............................
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | . Timing measurements:
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | . get job = 0 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,391 | INFO     | . initial setup = 2 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | . payload setup = 6 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | . stage-in = 0 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | . payload execution = 4104 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | . stage-out = 0 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | . log creation = 0 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,392 | INFO     | ..............................
[2025-12-13 21:29:27] 2025-12-14 02:29:07,465 | INFO     | 
[2025-12-13 21:29:27] 2025-12-14 02:29:07,465 | INFO     | job summary report
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | --------------------------------------------------
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | PanDA job id: 6929344135
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | task id: 47886831
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | errors: (none)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:29:27] 2025-12-14 02:29:07,466 | INFO     | pilot state: finished 
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | transexitcode: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | exeerrorcode: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | exeerrordiag: 
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | exitcode: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | exitmsg: OK
[2025-12-13 21:29:27] 2025-12-14 02:29:07,467 | INFO     | cpuconsumptiontime: 44545 s
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | nevents: 400
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | neventsw: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | pid: 26991
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | pgrp: 26991
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | corecount: 12
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | event service: False
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | sizes: {0: 2283990, 5: 2284252, 11: 2284308, 4116: 2310167, 4117: 2319165, 4118: 2319221, 4124: 2319543}
[2025-12-13 21:29:27] 2025-12-14 02:29:07,468 | INFO     | --------------------------------------------------
[2025-12-13 21:29:27] 2025-12-14 02:29:07,469 | INFO     | 
[2025-12-13 21:29:27] 2025-12-14 02:29:07,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 21:29:27] 2025-12-14 02:29:07,474 | INFO     | time since job start (4139s) is within the limit (174528.0s)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:29:27] 2025-12-14 02:29:07,497 | INFO     | job 6929344135 has completed (purged errors)
[2025-12-13 21:29:27] 2025-12-14 02:29:07,497 | INFO     | overall cleanup function is called
[2025-12-13 21:29:27] 2025-12-14 02:29:08,502 | INFO     | --- collectZombieJob: --- 10, [26991]
[2025-12-13 21:29:27] 2025-12-14 02:29:08,502 | INFO     | zombie collector waiting for pid 26991
[2025-12-13 21:29:27] 2025-12-14 02:29:08,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:29:27] 2025-12-14 02:29:08,502 | INFO     | collected zombie processes
[2025-12-13 21:29:27] 2025-12-14 02:29:08,503 | INFO     | will attempt to kill all subprocesses of pid=26991
[2025-12-13 21:29:27] 2025-12-14 02:29:08,589 | INFO     | process IDs to be killed: [26991] (in reverse order)
[2025-12-13 21:29:27] 2025-12-14 02:29:08,638 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:29:27] 2025-12-14 02:29:08,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:29:27] 2025-12-14 02:29:08,642 | INFO     | did not find any defunct processes belonging to 26991
[2025-12-13 21:29:27] 2025-12-14 02:29:08,645 | INFO     | did not find any defunct processes belonging to 26991
[2025-12-13 21:29:27] 2025-12-14 02:29:08,645 | INFO     | ready for new job
[2025-12-13 21:29:27] 2025-12-14 02:29:08,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:29:27] 2025-12-14 02:29:08,647 | INFO     | ***************************************
[2025-12-13 21:29:27] 2025-12-14 02:29:08,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:29:27] 2025-12-14 02:29:08,648 | INFO     | ***************************************
[2025-12-13 21:29:27] 2025-12-14 02:29:08,648 | INFO     | 
[2025-12-13 21:29:27] 2025-12-14 02:29:08,648 | INFO     | architecture information:
[2025-12-13 21:29:27] 2025-12-14 02:29:08,649 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:29:27] 2025-12-14 02:29:08,663 | INFO     | cat /etc/os-release:
[2025-12-13 21:29:27] NAME="CentOS Linux"
[2025-12-13 21:29:27] VERSION="7 (Core)"
[2025-12-13 21:29:27] ID="centos"
[2025-12-13 21:29:27] ID_LIKE="rhel fedora"
[2025-12-13 21:29:27] VERSION_ID="7"
[2025-12-13 21:29:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:29:27] ANSI_COLOR="0;31"
[2025-12-13 21:29:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:29:27] HOME_URL="https://www.centos.org/"
[2025-12-13 21:29:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:29:27] 
[2025-12-13 21:29:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:29:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:29:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:29:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:29:27] 
[2025-12-13 21:29:27] 2025-12-14 02:29:08,664 | INFO     | ***************************************
[2025-12-13 21:29:27] 2025-12-14 02:29:09,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 21:29:27] 2025-12-14 02:29:09,189 | INFO     | sufficient remaining disk space (18681430016 B)
[2025-12-13 21:29:27] 2025-12-14 02:29:09,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:29:27] 2025-12-14 02:29:09,190 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:29:27] 2025-12-14 02:29:09,190 | INFO     | update_server=False
[2025-12-13 21:29:27] 2025-12-14 02:29:09,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:29:27] 2025-12-14 02:29:09,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:29:27] 2025-12-14 02:29:09,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:29:27] 2025-12-14 02:29:09,191 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-13 21:29:27] 2025-12-14 02:29:09,192 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:29:27] 2025-12-14 02:29:09,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:29:27] 2025-12-14 02:29:09,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:29:27] 2025-12-14 02:29:09,440 | INFO     | all job control threads have been joined
[2025-12-13 21:29:27] 2025-12-14 02:29:10,102 | INFO     | all data control threads have been joined
[2025-12-13 21:29:27] 2025-12-14 02:29:10,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:29:27] 2025-12-14 02:29:10,153 | INFO     | aborting loop
[2025-12-13 21:29:27] 2025-12-14 02:29:10,193 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,196 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,253 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,256 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,349 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,380 | INFO     | all payload control threads have been joined
[2025-12-13 21:29:27] 2025-12-14 02:29:10,446 | INFO     | [job] control thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,711 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:10,943 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,107 | INFO     | [data] control thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,149 | INFO     | [job] validate thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,154 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,197 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,384 | INFO     | [payload] control thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,508 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:11,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:29:27] 2025-12-14 02:29:14,317 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:29:27] 2025-12-14 02:29:15,822 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:19,603 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:29:27] 2025-12-14 02:29:20,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:29:27] 2025-12-14 02:29:22,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064648795968)>', '<ExcThread(monitor, started 140064336090880)>']
[2025-12-13 21:29:27] 2025-12-14 02:29:23,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:29:27] 2025-12-14 02:29:23,255 | INFO     | [monitor] control thread has ended
[2025-12-13 21:29:27] 2025-12-14 02:29:27,527 | INFO     | all workflow threads have been joined
[2025-12-13 21:29:27] 2025-12-14 02:29:27,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:29:27] 2025-12-14 02:29:27,528 | INFO     | traces error code: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:27,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:29:27] 2025-12-14 02:29:27,616 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:29:27] 2025-12-14 02:29:27,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:29:27] 2025-12-14 02:29:27,623 [wrapper] pilotpid: 19899
[2025-12-13 21:29:27] 2025-12-14 02:29:27,627 [wrapper] Pilot exit status: 0
[2025-12-13 21:29:27] 2025-12-14 02:29:27,644 [wrapper] pandaids: 6929344135
[2025-12-13 21:29:27] 2025-12-14 02:29:27,683 [wrapper] cleanup supervisor_pilot 24296 19900
[2025-12-13 21:29:27] 2025-12-14 02:29:27,687 [wrapper] Test setup, not cleaning
[2025-12-13 21:29:27] 2025-12-14 02:29:27,691 [wrapper] apfmon messages muted
[2025-12-13 21:29:27] 2025-12-14 02:29:27,695 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:29:27] 2025-12-14 02:29:27,698 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:29:27]  *** Error codes and diagnostics ***
[2025-12-13 21:29:27]     "exeErrorCode": 0,
[2025-12-13 21:29:27]     "exeErrorDiag": "",
[2025-12-13 21:29:27]     "pilotErrorCode": 0,
[2025-12-13 21:29:27]     "pilotErrorDiag": "",
[2025-12-13 21:29:27]  *** Listing of results directory ***
[2025-12-13 21:29:27] total 330160
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-13 21:29:27] -rwx------ 1 boincer umatlas     36322 Dec 13 12:22 runpilot2-wrapper.sh
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:25 queuedata.json
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas       100 Dec 13 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:29:27] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 20:19 run_atlas
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas       105 Dec 13 20:19 job.xml
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas 192558672 Dec 13 20:19 EVNT.47886829._000250.pool.root.1
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:19 start_atlas.sh
[2025-12-13 21:29:27] drwxrwx--x 2 boincer umatlas      4096 Dec 13 20:19 shared
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas    592418 Dec 13 20:19 input.tar.gz
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas         0 Dec 13 20:19 boinc_lockfile
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 20:19 pandaJob.out
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas        57 Dec 13 20:19 setup.sh.local
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas    991744 Dec 13 20:20 agis_schedconf.cvmfs.json
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas   1516240 Dec 13 20:20 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:29:27] drwx------ 5 boincer umatlas      4096 Dec 13 20:20 pilot3
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas      5954 Dec 13 21:20 init_data.xml
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas       529 Dec 13 21:28 boinc_task_state.xml
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas 139634779 Dec 13 21:28 HITS.47886831._006255.pool.root.1
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas      1046 Dec 13 21:28 memory_monitor_summary.json
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas        95 Dec 13 21:29 pilot_heartbeat.json
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas    381306 Dec 13 21:29 log.47886831._006255.job.log.tgz.1
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 21:29 boinc_mmap_file
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas        27 Dec 13 21:29 wrapper_checkpoint.txt
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas      7844 Dec 13 21:29 heartbeat.json
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas      4624 Dec 13 21:29 pilotlog.txt
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas    606214 Dec 13 21:29 log.47886831._006255.job.log.1
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas       357 Dec 13 21:29 output.list
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas       620 Dec 13 21:29 runtime_log
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas   1003520 Dec 13 21:29 result.tar.gz
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas       659 Dec 13 21:29 x7WLDmFVio8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjAUKDmZAbbMm.diag
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas      9344 Dec 13 21:29 runtime_log.err
[2025-12-13 21:29:27] -rw-r--r-- 1 boincer umatlas     21839 Dec 13 21:29 stderr.txt
[2025-12-13 21:29:27] HITS file was successfully produced:
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas 139634779 Dec 13 21:28 shared/HITS.pool.root.1
[2025-12-13 21:29:27]  *** Contents of shared directory: ***
[2025-12-13 21:29:27] total 325988
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas 192558672 Dec 13 20:19 ATLAS.root_0
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:19 start_atlas.sh
[2025-12-13 21:29:27] -rw-r--r-- 2 boincer umatlas    592418 Dec 13 20:19 input.tar.gz
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas 139634779 Dec 13 21:28 HITS.pool.root.1
[2025-12-13 21:29:27] -rw------- 1 boincer umatlas   1003520 Dec 13 21:29 result.tar.gz
21:29:29 (15563): run_atlas exited; CPU time 44501.775600
21:29:29 (15563): called boinc_finish(0)

</stderr_txt>
]]>

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