Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:06 (2844929): wrapper (7.7.26015): starting
09:35:06 (2844929): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 09:35:06] Arguments: --nthreads 12
[2025-12-14 09:35:06] Threads: 12
[2025-12-14 09:35:06] Checking for CVMFS
[2025-12-14 09:35:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 09:35:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 09:35:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 09:35:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 09:35:06] 2.13.3.0 5263 52949 399064 153998 1 135 16757891 21551105 11705 16776704 0 243088145 99.514 296375663 32947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 09:35:06] CVMFS is ok
[2025-12-14 09:35:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 09:35:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 09:35:06] Further information can be found at the LHC@home message board.
[2025-12-14 09:35:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 09:35:06] Checking for apptainer binary...
[2025-12-14 09:35:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 09:35:06] Running /usr/bin/apptainer --version
[2025-12-14 09:35:06] apptainer version 1.4.5-2.el9
[2025-12-14 09:35:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 09:35:06] c-16-30.aglt2.org
[2025-12-14 09:35:06] apptainer works
[2025-12-14 09:35:06] Set ATHENA_PROC_NUMBER=12
[2025-12-14 09:35:06] Set ATHENA_CORE_NUMBER=12
[2025-12-14 09:35:06] Starting ATLAS job with PandaID=6929343703
[2025-12-14 09:35:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 09:08:32]  *** The last 200 lines of the pilot log: ***
[2025-12-15 09:08:32] 2025-12-15 10:43:24,227 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9956250000005
[2025-12-15 09:08:32] 2025-12-15 10:43:24,296 | INFO     | using path: /var/lib/condor/boinchome/slots/1/PanDA_Pilot-6929343703/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,297 | INFO     | extracted standard info from prmon json
[2025-12-15 09:08:32] 2025-12-15 10:43:24,297 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 09:08:32] 2025-12-15 10:43:24,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 09:08:32] 2025-12-15 10:43:24,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 09:08:32] 2025-12-15 10:43:24,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 09:08:32] 2025-12-15 10:43:24,352 | INFO     | fitting pss+swap vs Time
[2025-12-15 09:08:32] 2025-12-15 10:43:24,358 | INFO     | sum of square deviations: 518577299142.63684
[2025-12-15 09:08:32] 2025-12-15 10:43:24,437 | INFO     | sum of deviations: 726763204658.9441
[2025-12-15 09:08:32] 2025-12-15 10:43:24,438 | INFO     | mean x: 1765759119.243471
[2025-12-15 09:08:32] 2025-12-15 10:43:24,438 | INFO     | mean y: 2670737.50884583
[2025-12-15 09:08:32] 2025-12-15 10:43:24,438 | INFO     | intersect: -2471962761.2555604
[2025-12-15 09:08:32] 2025-12-15 10:43:24,440 | INFO     | chi2: 2.281464174435264
[2025-12-15 09:08:32] 2025-12-15 10:43:24,446 | INFO     | sum of square deviations: 512051850212.3731
[2025-12-15 09:08:32] 2025-12-15 10:43:24,527 | INFO     | sum of deviations: 804020588941.6804
[2025-12-15 09:08:32] 2025-12-15 10:43:24,527 | INFO     | mean x: 1765758966.748731
[2025-12-15 09:08:32] 2025-12-15 10:43:24,527 | INFO     | mean y: 2672536.453468697
[2025-12-15 09:08:32] 2025-12-15 10:43:24,527 | INFO     | intersect: -2769911067.6982307
[2025-12-15 09:08:32] 2025-12-15 10:43:24,529 | INFO     | chi2: 1.5668095888954012
[2025-12-15 09:08:32] 2025-12-15 10:43:24,529 | INFO     | current chi2=1.5668095888954012 (change=31.32438341780067 %)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,535 | INFO     | sum of square deviations: 505581306956.5509
[2025-12-15 09:08:32] 2025-12-15 10:43:24,617 | INFO     | sum of deviations: 798664802669.6395
[2025-12-15 09:08:32] 2025-12-15 10:43:24,618 | INFO     | mean x: 1765758814.253186
[2025-12-15 09:08:32] 2025-12-15 10:43:24,618 | INFO     | mean y: 2672410.2293967716
[2025-12-15 09:08:32] 2025-12-15 10:43:24,618 | INFO     | intersect: -2786689845.738846
[2025-12-15 09:08:32] 2025-12-15 10:43:24,620 | INFO     | chi2: 1.5665686667175827
[2025-12-15 09:08:32] 2025-12-15 10:43:24,624 | INFO     | current chi2=1.5665686667175827 (change=0.015376608588949204 %)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,624 | INFO     | right removable region: 1176
[2025-12-15 09:08:32] 2025-12-15 10:43:24,626 | INFO     | sum of square deviations: 512050949852.3738
[2025-12-15 09:08:32] 2025-12-15 10:43:24,709 | INFO     | sum of deviations: 518737394643.03906
[2025-12-15 09:08:32] 2025-12-15 10:43:24,713 | INFO     | mean x: 1765759271.748731
[2025-12-15 09:08:32] 2025-12-15 10:43:24,714 | INFO     | mean y: 2675590.5253807106
[2025-12-15 09:08:32] 2025-12-15 10:43:24,714 | INFO     | intersect: -1786141253.6925685
[2025-12-15 09:08:32] 2025-12-15 10:43:24,715 | INFO     | chi2: 0.859522729740529
[2025-12-15 09:08:32] 2025-12-15 10:43:24,716 | INFO     | current chi2=0.859522729740529 (change=62.32582832674598 %)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,719 | INFO     | sum of square deviations: 505579722788.05566
[2025-12-15 09:08:32] 2025-12-15 10:43:24,795 | INFO     | time since job start (72486s) is within the limit (174528.0s)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,814 | INFO     | sum of deviations: 461419242612.87805
[2025-12-15 09:08:32] 2025-12-15 10:43:24,815 | INFO     | mean x: 1765759424.2523365
[2025-12-15 09:08:32] 2025-12-15 10:43:24,815 | INFO     | mean y: 2676941.316907392
[2025-12-15 09:08:32] 2025-12-15 10:43:24,815 | INFO     | intersect: -1608850063.1326337
[2025-12-15 09:08:32] 2025-12-15 10:43:24,817 | INFO     | chi2: 0.8026890431631268
[2025-12-15 09:08:32] 2025-12-15 10:43:24,817 | INFO     | current chi2=0.8026890431631268 (change=6.6122377699725305 %)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,817 | INFO     | left removable region: 20
[2025-12-15 09:08:32] 2025-12-15 10:43:24,828 | INFO     | sum of square deviations: 478997763925.05566
[2025-12-15 09:08:32] 2025-12-15 10:43:24,895 | INFO     | monitor loop #2874: job 0:6929343703 is in state 'finished'
[2025-12-15 09:08:32] 2025-12-15 10:43:24,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,969 | INFO     | sum of deviations: 531245786171.6154
[2025-12-15 09:08:32] 2025-12-15 10:43:24,980 | INFO     | mean x: 1765759393.7629757
[2025-12-15 09:08:32] 2025-12-15 10:43:24,981 | INFO     | mean y: 2678725.4256055364
[2025-12-15 09:08:32] 2025-12-15 10:43:24,981 | INFO     | intersect: -1955685818.1639872
[2025-12-15 09:08:32] 2025-12-15 10:43:24,982 | INFO     | chi2: 0.04690849569722423
[2025-12-15 09:08:32] 2025-12-15 10:43:24,983 | INFO     | current memory leak: 1.11 B/s (using 1156 data points, chi2=0.05)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,996 | INFO     | could have reported an average CPU frequency of 2900 MHz (42 samples)
[2025-12-15 09:08:32] 2025-12-15 10:43:24,997 | INFO     | ..............................
[2025-12-15 09:08:32] 2025-12-15 10:43:24,997 | INFO     | . Timing measurements:
[2025-12-15 09:08:32] 2025-12-15 10:43:24,997 | INFO     | . get job = 0 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,997 | INFO     | . initial setup = 2 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,997 | INFO     | . payload setup = 7 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,998 | INFO     | . stage-in = 0 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,998 | INFO     | . payload execution = 72408 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,998 | INFO     | . stage-out = 8 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,998 | INFO     | . log creation = 1 s
[2025-12-15 09:08:32] 2025-12-15 10:43:24,998 | INFO     | ..............................
[2025-12-15 09:08:32] 2025-12-15 10:43:25,511 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 10:43:25,512 | INFO     | job summary report
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | --------------------------------------------------
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | PanDA job id: 6929343703
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | task id: 47886831
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | errors: (none)
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 09:08:32] 2025-12-15 10:43:25,513 | INFO     | pilot state: finished 
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | transexitcode: 0
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | exeerrorcode: 0
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | exeerrordiag: 
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | exitcode: 0
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | exitmsg: OK
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | cpuconsumptiontime: 87420 s
[2025-12-15 09:08:32] 2025-12-15 10:43:25,514 | INFO     | nevents: 400
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | neventsw: 0
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | pid: 2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | pgrp: 2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | corecount: 12
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | event service: False
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | sizes: {0: 2283830, 1: 2284029, 5: 2284291, 11: 2284347, 72422: 2338421, 72433: 2347469, 72434: 2347653, 72472: 2347847}
[2025-12-15 09:08:32] 2025-12-15 10:43:25,515 | INFO     | --------------------------------------------------
[2025-12-15 09:08:32] 2025-12-15 10:43:25,516 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 10:43:25,516 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/1
[2025-12-15 09:08:32] 2025-12-15 10:43:26,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,034 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,034 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 09:08:32] 2025-12-15 10:43:26,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 10:43:26,054 | INFO     | job 6929343703 has completed (purged errors)
[2025-12-15 09:08:32] 2025-12-15 10:43:26,054 | INFO     | overall cleanup function is called
[2025-12-15 09:08:32] 2025-12-15 10:43:27,063 | INFO     | --- collectZombieJob: --- 10, [2874591]
[2025-12-15 09:08:32] 2025-12-15 10:43:27,063 | INFO     | zombie collector waiting for pid 2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:27,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 09:08:32] 2025-12-15 10:43:27,064 | INFO     | collected zombie processes
[2025-12-15 09:08:32] 2025-12-15 10:43:27,064 | INFO     | will attempt to kill all subprocesses of pid=2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:29,327 | INFO     | process IDs to be killed: [2874591] (in reverse order)
[2025-12-15 09:08:32] 2025-12-15 10:43:30,219 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 09:08:32] 2025-12-15 10:43:30,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 09:08:32] 2025-12-15 10:43:30,360 | INFO     | did not find any defunct processes belonging to 2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:30,495 | INFO     | did not find any defunct processes belonging to 2874591
[2025-12-15 09:08:32] 2025-12-15 10:43:30,495 | INFO     | ready for new job
[2025-12-15 09:08:32] 2025-12-15 10:43:30,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 09:08:32] 2025-12-15 10:43:30,531 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 10:43:30,540 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 09:08:32] 2025-12-15 10:43:30,540 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 10:43:30,540 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 10:43:30,542 | INFO     | architecture information:
[2025-12-15 09:08:32] 2025-12-15 10:43:30,551 | INFO     | executing command: cat /etc/os-release
[2025-12-15 09:08:32] 2025-12-15 10:43:30,703 | INFO     | cat /etc/os-release:
[2025-12-15 09:08:32] NAME="CentOS Linux"
[2025-12-15 09:08:32] VERSION="7 (Core)"
[2025-12-15 09:08:32] ID="centos"
[2025-12-15 09:08:32] ID_LIKE="rhel fedora"
[2025-12-15 09:08:32] VERSION_ID="7"
[2025-12-15 09:08:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 09:08:32] ANSI_COLOR="0;31"
[2025-12-15 09:08:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 09:08:32] HOME_URL="https://www.centos.org/"
[2025-12-15 09:08:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 09:08:32] 
[2025-12-15 09:08:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 09:08:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 09:08:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 09:08:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 09:08:32] 
[2025-12-15 09:08:32] 2025-12-15 10:43:30,704 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 10:43:31,208 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/1
[2025-12-15 09:08:32] 2025-12-15 10:43:31,371 | INFO     | sufficient remaining disk space (1751098851328 B)
[2025-12-15 09:08:32] 2025-12-15 10:43:31,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 09:08:32] 2025-12-15 10:43:31,371 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 09:08:32] 2025-12-15 10:43:31,372 | INFO     | update_server=False
[2025-12-15 09:08:32] 2025-12-15 10:43:31,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 09:08:32] 2025-12-15 10:43:31,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 10:43:31,373 | INFO     | aborting loop
[2025-12-15 09:08:32] 2025-12-15 10:43:31,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 10:43:31,639 | INFO     | all job control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 10:43:31,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 10:43:32,377 | INFO     | [job] retrieve thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:32,379 | INFO     | [job] job monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:32,402 | INFO     | [job] queue monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:32,466 | INFO     | all data control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 10:43:32,646 | INFO     | [job] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:32,692 | INFO     | all payload control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 10:43:32,890 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,278 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,284 | INFO     | [job] validate thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,307 | INFO     | [data] copytool_in thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,370 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,473 | INFO     | [data] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,557 | INFO     | [payload] validate_post thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,647 | INFO     | [payload] failed_post thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,698 | INFO     | [payload] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:33,931 | INFO     | [data] copytool_out thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:43:34,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 10:43:38,466 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 10:44:00,661 | INFO     | [monitor] cgroup control has ended
[2025-12-15 09:08:32] 2025-12-15 10:44:00,936 | INFO     | PID=2854456 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 09:08:32] 2025-12-15 10:44:00,936 | INFO     | .. there are 18 such processes running
[2025-12-15 09:08:32] 2025-12-15 10:44:00,988 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 09:08:32] 2025-12-15 10:44:00,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 09:08:32] 2025-12-15 10:44:00,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 09:08:32] 2025-12-15 10:44:01,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247342782272)>', '<ExcThread(monitor, started 140246712837888)>']
[2025-12-15 09:08:32] 2025-12-15 10:44:01,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 09:08:32] 2025-12-15 10:44:01,994 | INFO     | [monitor] control thread has ended
[2025-12-15 09:08:32] 2025-12-15 10:44:06,131 | INFO     | all workflow threads have been joined
[2025-12-15 09:08:32] 2025-12-15 10:44:06,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 09:08:32] 2025-12-15 10:44:06,132 | INFO     | traces error code: 0
[2025-12-15 09:08:32] 2025-12-15 10:44:06,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 09:08:32] 2025-12-15 10:44:06,364 [wrapper] ==== pilot stdout END ====
[2025-12-15 09:08:32] 2025-12-15 10:44:06,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 09:08:32] 2025-12-15 10:44:06,403 [wrapper] pilotpid: 2854456
[2025-12-15 09:08:32] 2025-12-15 10:44:06,421 [wrapper] Pilot exit status: 0
[2025-12-15 09:08:32] 2025-12-15 10:44:06,508 [wrapper] pandaids: 6929343703
[2025-12-15 09:08:32] 2025-12-15 10:44:07,368 [wrapper] cleanup supervisor_pilot 2760639 2854457
[2025-12-15 09:08:32] 2025-12-15 10:44:07,428 [wrapper] Test setup, not cleaning
[2025-12-15 09:08:32] 2025-12-15 10:44:07,488 [wrapper] apfmon messages muted
[2025-12-15 09:08:32] 2025-12-15 10:44:07,573 [wrapper] ==== wrapper stdout END ====
[2025-12-15 09:08:32] 2025-12-15 10:44:07,635 [wrapper] ==== wrapper stderr END ====
[2025-12-15 09:08:32]  *** Error codes and diagnostics ***
[2025-12-15 09:08:32]     "exeErrorCode": 0,
[2025-12-15 09:08:32]     "exeErrorDiag": "",
[2025-12-15 09:08:32]     "pilotErrorCode": 0,
[2025-12-15 09:08:32]     "pilotErrorDiag": "",
[2025-12-15 09:08:32]  *** Listing of results directory ***
[2025-12-15 09:08:32] total 353048
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-15 09:08:32] -rwx------. 1 boincer umatlas     36322 Dec 13 12:22 runpilot2-wrapper.sh
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 12:24 queuedata.json
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       100 Dec 14 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 09:08:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 09:35 run_atlas
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       105 Dec 14 09:35 job.xml
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas 191059712 Dec 14 09:35 EVNT.47886829._000233.pool.root.1
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      6455 Dec 14 09:35 init_data.xml
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 09:35 start_atlas.sh
[2025-12-15 09:08:32] drwxrwx--x. 2 boincer umatlas        68 Dec 14 09:35 shared
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas    592419 Dec 14 09:35 input.tar.gz
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas         0 Dec 14 09:35 boinc_lockfile
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      2538 Dec 14 09:35 pandaJob.out
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas    991024 Dec 14 09:35 agis_schedconf.cvmfs.json
[2025-12-15 09:08:32] drwx------. 5 boincer umatlas      4096 Dec 14 09:35 pilot3
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 150330158 Dec 15 05:41 HITS.47886831._005827.pool.root.1
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       528 Dec 15 05:41 boinc_task_state.xml
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas      1038 Dec 15 05:42 memory_monitor_summary.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   1516240 Dec 15 05:42 agis_ddmendpoints.agis.ALL.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   1093922 Dec 15 05:42 log.47886831._005827.job.log.tgz.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas      7814 Dec 15 05:43 heartbeat.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas        95 Dec 15 05:44 pilot_heartbeat.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas      4837 Dec 15 05:44 pilotlog.txt
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   7018032 Dec 15 05:44 log.47886831._005827.job.log.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas       357 Dec 15 05:44 output.list
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       620 Dec 15 05:44 runtime_log
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   8130560 Dec 15 05:44 result.tar.gz
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      8991 Dec 15 05:44 runtime_log.err
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas       657 Dec 15 05:44 rr5MDm2Uio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme2PKDmW0FQom.diag
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas        25 Dec 15 09:08 wrapper_checkpoint.txt
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 09:08 boinc_mmap_file
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas     21281 Dec 15 09:08 stderr.txt
[2025-12-15 09:08:32] HITS file was successfully produced:
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 150330158 Dec 15 05:41 shared/HITS.pool.root.1
[2025-12-15 09:08:32]  *** Contents of shared directory: ***
[2025-12-15 09:08:32] total 341932
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas 191059712 Dec 14 09:35 ATLAS.root_0
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 09:35 start_atlas.sh
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas    592419 Dec 14 09:35 input.tar.gz
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 150330158 Dec 15 05:41 HITS.pool.root.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   8130560 Dec 15 05:44 result.tar.gz
09:08:34 (2844929): run_atlas exited; CPU time 90558.567601
09:08:34 (2844929): called boinc_finish(0)

</stderr_txt>
]]>

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