Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:14:19 (12535): wrapper (7.7.26015): starting
20:14:19 (12535): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 20:14:19] Arguments: --nthreads 12
[2025-12-13 20:14:19] Threads: 12
[2025-12-13 20:14:19] Checking for CVMFS
[2025-12-13 20:14:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:14:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:14:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:14:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:14:19] 2.11.2.0 2945 312928 94064 153978 0 57 14612759 20275200 1 130560 2 137825454 99.963 18447818 15441 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 20:14:19] CVMFS is ok
[2025-12-13 20:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:14:19] Further information can be found at the LHC@home message board.
[2025-12-13 20:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:14:19] Checking for apptainer binary...
[2025-12-13 20:14:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:14:19] Running /usr/bin/apptainer --version
[2025-12-13 20:14:19] apptainer version 1.3.2-1.el7
[2025-12-13 20:14:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:14:21] c-205-2.aglt2.org
[2025-12-13 20:14:21] apptainer works
[2025-12-13 20:14:21] Set ATHENA_PROC_NUMBER=12
[2025-12-13 20:14:21] Set ATHENA_CORE_NUMBER=12
[2025-12-13 20:14:21] Starting ATLAS job with PandaID=6929343682
[2025-12-13 20:14:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:33:50]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:33:50]  scope=mc23_13p6TeV
[2025-12-13 21:33:50]  status=None
[2025-12-13 21:33:50]  status_code=0
[2025-12-13 21:33:50]  storage_token=
[2025-12-13 21:33:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929343682/log.47886831._005806.job.log.tgz.1
[2025-12-13 21:33:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/58/log.47886831._005806.job.log.tgz.1
[2025-12-13 21:33:50]  workdir=None
[2025-12-13 21:33:50] ]
[2025-12-13 21:33:50] 2025-12-14 02:33:08,256 | INFO     | transferring file log.47886831._005806.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929343682/log.47886831._005806.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 21:33:50] 2025-12-14 02:33:08,257 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929343682/log.47886831._005806.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._005806.job
[2025-12-13 21:33:50] 2025-12-14 02:33:08,280 | INFO     | adding to output.list: log.47886831._005806.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/58/log.47886831._005806.job.log.tg
[2025-12-13 21:33:50] 2025-12-14 02:33:08,281 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 21:33:50] 2025-12-14 02:33:08,281 | INFO     | summary of transferred files:
[2025-12-13 21:33:50] 2025-12-14 02:33:08,281 | INFO     |  -- lfn=log.47886831._005806.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 21:33:50] 2025-12-14 02:33:08,282 | INFO     | stage-out finished correctly
[2025-12-13 21:33:50] 2025-12-14 02:33:09,273 | INFO     | time since job start (4713s) is within the limit (174528.0s)
[2025-12-13 21:33:50] 2025-12-14 02:33:09,716 | INFO     | monitor loop #351: job 0:6929343682 is in state 'finished'
[2025-12-13 21:33:50] 2025-12-14 02:33:09,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:33:50] 2025-12-14 02:33:11,279 | INFO     | time since job start (4715s) is within the limit (174528.0s)
[2025-12-13 21:33:50] 2025-12-14 02:33:11,584 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 21:33:50] 2025-12-14 02:33:11,827 | INFO     | job 6929343682 has state=finished
[2025-12-13 21:33:50] 2025-12-14 02:33:11,827 | INFO     | preparing for final server update for job 6929343682 in state='finished'
[2025-12-13 21:33:50] 2025-12-14 02:33:11,827 | INFO     | this job has now completed (state=finished)
[2025-12-13 21:33:50] 2025-12-14 02:33:11,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 21:33:50] 2025-12-14 02:33:11,828 | INFO     | log transfer has been attempted: DONE
[2025-12-13 21:33:50] 2025-12-14 02:33:11,828 | INFO     | job 6929343682 has finished - writing final server update
[2025-12-13 21:33:50] 2025-12-14 02:33:11,828 | INFO     | total number of processed events: 400 (read)
[2025-12-13 21:33:50] 2025-12-14 02:33:11,829 | INFO     | executing command: lscpu
[2025-12-13 21:33:50] 2025-12-14 02:33:11,854 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 21:33:50] 2025-12-14 02:33:12,219 | INFO     | monitor loop #352: job 0:6929343682 is in state 'finished'
[2025-12-13 21:33:50] 2025-12-14 02:33:12,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:33:50] 2025-12-14 02:33:13,284 | INFO     | time since job start (4717s) is within the limit (174528.0s)
[2025-12-13 21:33:50] 2025-12-14 02:33:14,723 | INFO     | monitor loop #353: job 0:6929343682 is in state 'finished'
[2025-12-13 21:33:50] 2025-12-14 02:33:14,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:33:50] 2025-12-14 02:33:15,290 | INFO     | time since job start (4719s) is within the limit (174528.0s)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,226 | INFO     | monitor loop #354: job 0:6929343682 is in state 'finished'
[2025-12-13 21:33:50] 2025-12-14 02:33:17,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,295 | INFO     | time since job start (4721s) is within the limit (174528.0s)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,953 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 21:33:50] 2025-12-14 02:33:17,957 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-13 21:33:50] 2025-12-14 02:33:17,959 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929343682/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,960 | INFO     | extracted standard info from prmon json
[2025-12-13 21:33:50] 2025-12-14 02:33:17,960 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:33:50] 2025-12-14 02:33:17,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:33:50] 2025-12-14 02:33:17,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:33:50] 2025-12-14 02:33:17,960 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:33:50] 2025-12-14 02:33:17,962 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:33:50] 2025-12-14 02:33:17,962 | INFO     | sum of square deviations: 106336877.5
[2025-12-13 21:33:50] 2025-12-14 02:33:17,962 | INFO     | sum of deviations: -6456192816.499999
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | mean x: 1765677314.5
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | mean y: 2887991.214285714
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | intersect: 107205144274.61803
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | chi2: 0.07245086706452578
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | current memory leak: -60.71 B/s (using 70 data points, chi2=0.07)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,963 | INFO     | could have reported an average CPU frequency of 2026 MHz (6 samples)
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | ..............................
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . Timing measurements:
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . get job = 0 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . initial setup = 2 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . payload setup = 7 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . stage-in = 0 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . payload execution = 4683 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . stage-out = 0 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,964 | INFO     | . log creation = 0 s
[2025-12-13 21:33:50] 2025-12-14 02:33:17,965 | INFO     | ..............................
[2025-12-13 21:33:50] 2025-12-14 02:33:18,316 | INFO     | 
[2025-12-13 21:33:50] 2025-12-14 02:33:18,317 | INFO     | job summary report
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | --------------------------------------------------
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | PanDA job id: 6929343682
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | task id: 47886831
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | errors: (none)
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | pilot state: finished 
[2025-12-13 21:33:50] 2025-12-14 02:33:18,322 | INFO     | transexitcode: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | exeerrorcode: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | exeerrordiag: 
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | exitcode: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | exitmsg: OK
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | cpuconsumptiontime: 51298 s
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | nevents: 400
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | neventsw: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:18,323 | INFO     | pid: 22603
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | pgrp: 22603
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | corecount: 12
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | event service: False
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | sizes: {0: 2283990, 5: 2284252, 11: 2284308, 4694: 2310486, 4695: 2319484, 4699: 2319540, 4705: 2319862}
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | --------------------------------------------------
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | 
[2025-12-13 21:33:50] 2025-12-14 02:33:18,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 21:33:50] 2025-12-14 02:33:18,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:33:50] 2025-12-14 02:33:18,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:33:50] 2025-12-14 02:33:18,355 | INFO     | job 6929343682 has completed (purged errors)
[2025-12-13 21:33:50] 2025-12-14 02:33:18,356 | INFO     | overall cleanup function is called
[2025-12-13 21:33:50] 2025-12-14 02:33:19,364 | INFO     | --- collectZombieJob: --- 10, [22603]
[2025-12-13 21:33:50] 2025-12-14 02:33:19,364 | INFO     | zombie collector waiting for pid 22603
[2025-12-13 21:33:50] 2025-12-14 02:33:19,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:33:50] 2025-12-14 02:33:19,364 | INFO     | collected zombie processes
[2025-12-13 21:33:50] 2025-12-14 02:33:19,365 | INFO     | will attempt to kill all subprocesses of pid=22603
[2025-12-13 21:33:50] 2025-12-14 02:33:19,454 | INFO     | process IDs to be killed: [22603] (in reverse order)
[2025-12-13 21:33:50] 2025-12-14 02:33:19,507 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:33:50] 2025-12-14 02:33:19,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:33:50] 2025-12-14 02:33:19,511 | INFO     | did not find any defunct processes belonging to 22603
[2025-12-13 21:33:50] 2025-12-14 02:33:19,513 | INFO     | did not find any defunct processes belonging to 22603
[2025-12-13 21:33:50] 2025-12-14 02:33:19,513 | INFO     | ready for new job
[2025-12-13 21:33:50] 2025-12-14 02:33:19,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:33:50] 2025-12-14 02:33:19,514 | INFO     | ***************************************
[2025-12-13 21:33:50] 2025-12-14 02:33:19,515 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:33:50] 2025-12-14 02:33:19,515 | INFO     | ***************************************
[2025-12-13 21:33:50] 2025-12-14 02:33:19,515 | INFO     | 
[2025-12-13 21:33:50] 2025-12-14 02:33:19,515 | INFO     | architecture information:
[2025-12-13 21:33:50] 2025-12-14 02:33:19,516 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:33:50] 2025-12-14 02:33:19,531 | INFO     | cat /etc/os-release:
[2025-12-13 21:33:50] NAME="CentOS Linux"
[2025-12-13 21:33:50] VERSION="7 (Core)"
[2025-12-13 21:33:50] ID="centos"
[2025-12-13 21:33:50] ID_LIKE="rhel fedora"
[2025-12-13 21:33:50] VERSION_ID="7"
[2025-12-13 21:33:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:33:50] ANSI_COLOR="0;31"
[2025-12-13 21:33:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:33:50] HOME_URL="https://www.centos.org/"
[2025-12-13 21:33:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:33:50] 
[2025-12-13 21:33:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:33:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:33:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:33:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:33:50] 
[2025-12-13 21:33:50] 2025-12-14 02:33:19,532 | INFO     | ***************************************
[2025-12-13 21:33:50] 2025-12-14 02:33:20,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 21:33:50] 2025-12-14 02:33:20,052 | INFO     | sufficient remaining disk space (29519511552 B)
[2025-12-13 21:33:50] 2025-12-14 02:33:20,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:33:50] 2025-12-14 02:33:20,053 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:33:50] 2025-12-14 02:33:20,053 | INFO     | update_server=False
[2025-12-13 21:33:50] 2025-12-14 02:33:20,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:33:50] 2025-12-14 02:33:20,118 | INFO     | all payload control threads have been joined
[2025-12-13 21:33:50] 2025-12-14 02:33:20,665 | INFO     | all job control threads have been joined
[2025-12-13 21:33:50] 2025-12-14 02:33:20,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:33:50] 2025-12-14 02:33:20,734 | INFO     | aborting loop
[2025-12-13 21:33:50] 2025-12-14 02:33:20,911 | INFO     | all data control threads have been joined
[2025-12-13 21:33:50] 2025-12-14 02:33:21,059 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,123 | INFO     | [payload] control thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,350 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:33:50] 2025-12-14 02:33:21,671 | INFO     | [job] control thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,740 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,813 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,916 | INFO     | [data] control thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:21,948 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:22,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:33:50] 2025-12-14 02:33:22,173 | INFO     | [job] validate thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:22,469 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:22,529 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:22,559 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:23,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:33:50] 2025-12-14 02:33:23,386 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:24,061 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:26,177 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:30,999 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:33:50] 2025-12-14 02:33:32,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:33:50] 2025-12-14 02:33:43,617 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:33:50] 2025-12-14 02:33:44,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204824074048)>', '<ExcThread(monitor, started 140204023207680)>']
[2025-12-13 21:33:50] 2025-12-14 02:33:49,648 | INFO     | all workflow threads have been joined
[2025-12-13 21:33:50] 2025-12-14 02:33:49,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:33:50] 2025-12-14 02:33:49,651 | INFO     | traces error code: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:49,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:33:50] 2025-12-14 02:33:50,498 | INFO     | PID=16212 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 21:33:50] 2025-12-14 02:33:50,499 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:33:50] 2025-12-14 02:33:50,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:33:50] 2025-12-14 02:33:50,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:33:50] 2025-12-14 02:33:50,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:33:50] 2025-12-14 02:33:50,500 | INFO     | [monitor] control thread has ended
[2025-12-13 21:33:50] 2025-12-14 02:33:50,595 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:33:50] 2025-12-14 02:33:50,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:33:50] 2025-12-14 02:33:50,604 [wrapper] pilotpid: 16212
[2025-12-13 21:33:50] 2025-12-14 02:33:50,608 [wrapper] Pilot exit status: 0
[2025-12-13 21:33:50] 2025-12-14 02:33:50,624 [wrapper] pandaids: 6929343682
[2025-12-13 21:33:50] 2025-12-14 02:33:50,669 [wrapper] cleanup supervisor_pilot 18070 16213
[2025-12-13 21:33:50] 2025-12-14 02:33:50,673 [wrapper] Test setup, not cleaning
[2025-12-13 21:33:50] 2025-12-14 02:33:50,677 [wrapper] apfmon messages muted
[2025-12-13 21:33:50] 2025-12-14 02:33:50,680 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:33:50] 2025-12-14 02:33:50,684 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:33:50]  *** Error codes and diagnostics ***
[2025-12-13 21:33:50]     "exeErrorCode": 0,
[2025-12-13 21:33:50]     "exeErrorDiag": "",
[2025-12-13 21:33:50]     "pilotErrorCode": 0,
[2025-12-13 21:33:50]     "pilotErrorDiag": "",
[2025-12-13 21:33:50]  *** Listing of results directory ***
[2025-12-13 21:33:50] total 341724
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-13 21:33:50] -rwx------ 1 boincer umatlas     36322 Dec 13 12:22 runpilot2-wrapper.sh
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:24 queuedata.json
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas       100 Dec 13 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:33:50] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 20:14 run_atlas
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas       105 Dec 13 20:14 job.xml
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas 190875048 Dec 13 20:14 EVNT.47886829._000232.pool.root.1
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:14 start_atlas.sh
[2025-12-13 21:33:50] drwxrwx--x 2 boincer umatlas      4096 Dec 13 20:14 shared
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas    592418 Dec 13 20:14 input.tar.gz
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas         0 Dec 13 20:14 boinc_lockfile
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 20:14 pandaJob.out
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas        57 Dec 13 20:14 setup.sh.local
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas    991736 Dec 13 20:14 agis_schedconf.cvmfs.json
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas   1516240 Dec 13 20:14 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:33:50] drwx------ 5 boincer umatlas      4096 Dec 13 20:14 pilot3
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas      5951 Dec 13 21:29 init_data.xml
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas 153001885 Dec 13 21:32 HITS.47886831._005806.pool.root.1
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas       530 Dec 13 21:32 boinc_task_state.xml
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas      1047 Dec 13 21:33 memory_monitor_summary.json
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas    387540 Dec 13 21:33 log.47886831._005806.job.log.tgz.1
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas      7846 Dec 13 21:33 heartbeat.json
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 21:33 boinc_mmap_file
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas        27 Dec 13 21:33 wrapper_checkpoint.txt
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas        95 Dec 13 21:33 pilot_heartbeat.json
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas       745 Dec 13 21:33 pilotlog.txt
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas    682341 Dec 13 21:33 log.47886831._005806.job.log.1
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas       357 Dec 13 21:33 output.list
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas       620 Dec 13 21:33 runtime_log
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas   1085440 Dec 13 21:33 result.tar.gz
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas       658 Dec 13 21:33 uWxMDm2Uio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmY2PKDmaq1mFm.diag
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 21:33 runtime_log.err
[2025-12-13 21:33:50] -rw-r--r-- 1 boincer umatlas     21977 Dec 13 21:33 stderr.txt
[2025-12-13 21:33:50] HITS file was successfully produced:
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas 153001885 Dec 13 21:32 shared/HITS.pool.root.1
[2025-12-13 21:33:50]  *** Contents of shared directory: ***
[2025-12-13 21:33:50] total 337480
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas 190875048 Dec 13 20:14 ATLAS.root_0
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:14 start_atlas.sh
[2025-12-13 21:33:50] -rw-r--r-- 2 boincer umatlas    592418 Dec 13 20:14 input.tar.gz
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas 153001885 Dec 13 21:32 HITS.pool.root.1
[2025-12-13 21:33:50] -rw------- 1 boincer umatlas   1085440 Dec 13 21:33 result.tar.gz
21:33:52 (12535): run_atlas exited; CPU time 51278.111451
21:33:52 (12535): called boinc_finish(0)

</stderr_txt>
]]>

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