Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:20 (2490154): wrapper (7.7.26015): starting
20:11:20 (2490154): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 20:11:20] Arguments: --nthreads 8
[2025-12-13 20:11:20] Threads: 8
[2025-12-13 20:11:20] Checking for CVMFS
[2025-12-13 20:11:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:11:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:11:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:11:22] 2.13.2.0 6383 59592 262352 153978 1 518 34859129 40960001 11019 16776704 0 74420383 99.731 47472862 37076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 20:11:22] CVMFS is ok
[2025-12-13 20:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:11:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:11:22] Further information can be found at the LHC@home message board.
[2025-12-13 20:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:11:22] Checking for apptainer binary...
[2025-12-13 20:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:11:22] Running /usr/bin/apptainer --version
[2025-12-13 20:11:22] apptainer version 1.4.4-1.el9
[2025-12-13 20:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:11:22] c-210-37-2.aglt2.org
[2025-12-13 20:11:22] apptainer works
[2025-12-13 20:11:23] Set ATHENA_PROC_NUMBER=8
[2025-12-13 20:11:23] Set ATHENA_CORE_NUMBER=8
[2025-12-13 20:11:23] Starting ATLAS job with PandaID=6929503308
[2025-12-13 20:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 23:03:07]  *** The last 200 lines of the pilot log: ***
[2025-12-13 23:03:07] 2025-12-14 04:02:11,184 | INFO     | PID=2495727 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-13 23:03:07] 2025-12-14 04:02:11,184 | INFO     | .. there are 10 such processes running
[2025-12-13 23:03:07] 2025-12-14 04:02:11,804 | INFO     | monitor loop #713: job 0:6929503308 is in state 'finished'
[2025-12-13 23:03:07] 2025-12-14 04:02:11,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 23:03:07] 2025-12-14 04:02:12,185 | INFO     | time since job start (10188s) is within the limit (174528.0s)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,015 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 23:03:07] 2025-12-14 04:02:14,018 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2826.31530357143
[2025-12-13 23:03:07] 2025-12-14 04:02:14,027 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929503308/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,027 | INFO     | extracted standard info from prmon json
[2025-12-13 23:03:07] 2025-12-14 04:02:14,028 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 23:03:07] 2025-12-14 04:02:14,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 23:03:07] 2025-12-14 04:02:14,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 23:03:07] 2025-12-14 04:02:14,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 23:03:07] 2025-12-14 04:02:14,031 | INFO     | fitting pss+swap vs Time
[2025-12-13 23:03:07] 2025-12-14 04:02:14,031 | INFO     | sum of square deviations: 1392972727.9030244
[2025-12-13 23:03:07] 2025-12-14 04:02:14,032 | INFO     | sum of deviations: -27081336761.22423
[2025-12-13 23:03:07] 2025-12-14 04:02:14,032 | INFO     | mean x: 1765679873.1757576
[2025-12-13 23:03:07] 2025-12-14 04:02:14,032 | INFO     | mean y: 2593049.5939393938
[2025-12-13 23:03:07] 2025-12-14 04:02:14,032 | INFO     | intersect: 34329877640.421402
[2025-12-13 23:03:07] 2025-12-14 04:02:14,032 | INFO     | chi2: 2.044521675340911
[2025-12-13 23:03:07] 2025-12-14 04:02:14,033 | INFO     | sum of square deviations: 1270121531.7749953
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | sum of deviations: -25296431037.24999
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | mean x: 1765679720.6625
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | mean y: 2595266.125
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | intersect: 35168832645.93687
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | chi2: 2.0418423856468055
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | current chi2=2.0418423856468055 (change=0.13104726285958757 %)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | right removable region: 159
[2025-12-13 23:03:07] 2025-12-14 04:02:14,034 | INFO     | sum of square deviations: 1270133672.7437482
[2025-12-13 23:03:07] 2025-12-14 04:02:14,035 | INFO     | sum of deviations: -57640638815.85625
[2025-12-13 23:03:07] 2025-12-14 04:02:14,035 | INFO     | mean x: 1765680025.68125
[2025-12-13 23:03:07] 2025-12-14 04:02:14,035 | INFO     | mean y: 2630561.08125
[2025-12-13 23:03:07] 2025-12-14 04:02:14,035 | INFO     | intersect: 80131932546.13145
[2025-12-13 23:03:07] 2025-12-14 04:02:14,036 | INFO     | chi2: 0.2269957036173144
[2025-12-13 23:03:07] 2025-12-14 04:02:14,036 | INFO     | current chi2=0.2269957036173144 (change=88.89736869238794 %)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,036 | INFO     | sum of square deviations: 1154746132.9419365
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | sum of deviations: -55939777870.1484
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | mean x: 1765680178.1806452
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | mean y: 2628226.683870968
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | intersect: 85538101470.06197
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | chi2: 0.19779069924604795
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | current chi2=0.19779069924604795 (change=12.865884202153152 %)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | left removable region: 20
[2025-12-13 23:03:07] 2025-12-14 04:02:14,037 | INFO     | sum of square deviations: 832772269.1942432
[2025-12-13 23:03:07] 2025-12-14 04:02:14,038 | INFO     | sum of deviations: -41202284120.55394
[2025-12-13 23:03:07] 2025-12-14 04:02:14,038 | INFO     | mean x: 1765680300.1654677
[2025-12-13 23:03:07] 2025-12-14 04:02:14,038 | INFO     | mean y: 2613907.676258993
[2025-12-13 23:03:07] 2025-12-14 04:02:14,038 | INFO     | intersect: 87361504308.61693
[2025-12-13 23:03:07] 2025-12-14 04:02:14,038 | INFO     | chi2: 0.18117911366030548
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | current memory leak: -49.48 B/s (using 139 data points, chi2=0.18)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | could have reported an average CPU frequency of 2743 MHz (9 samples)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | ..............................
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . Timing measurements:
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . get job = 0 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . initial setup = 5 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . payload setup = 35 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . stage-in = 0 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,039 | INFO     | . payload execution = 10074 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,040 | INFO     | . stage-out = 1 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,040 | INFO     | . log creation = 0 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,040 | INFO     | ..............................
[2025-12-13 23:03:07] 2025-12-14 04:02:14,192 | INFO     | time since job start (10190s) is within the limit (174528.0s)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | 
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | job summary report
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | --------------------------------------------------
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | PanDA job id: 6929503308
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | task id: 47898878
[2025-12-13 23:03:07] 2025-12-14 04:02:14,517 | INFO     | errors: (none)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | pilot state: finished 
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | transexitcode: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | exeerrorcode: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | exeerrordiag: 
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | exitcode: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | exitmsg: OK
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | cpuconsumptiontime: 40190 s
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | nevents: 400
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | neventsw: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | pid: 2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | pgrp: 2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | corecount: 8
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | event service: False
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | sizes: {0: 2283711, 1: 2283795, 2: 2283994, 13: 2283994, 24: 2284050, 32: 2284340, 35: 2284496, 10113: 2313372, 10114: 2313371, 10115: 2322425, 10118: 2322481, 101
[2025-12-13 23:03:07] 2025-12-14 04:02:14,518 | INFO     | --------------------------------------------------
[2025-12-13 23:03:07] 2025-12-14 04:02:14,519 | INFO     | 
[2025-12-13 23:03:07] 2025-12-14 04:02:14,519 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 23:03:07] 2025-12-14 04:02:14,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 23:03:07] 2025-12-14 04:02:14,540 | INFO     | job 6929503308 has completed (purged errors)
[2025-12-13 23:03:07] 2025-12-14 04:02:14,540 | INFO     | overall cleanup function is called
[2025-12-13 23:03:07] 2025-12-14 04:02:15,547 | INFO     | --- collectZombieJob: --- 10, [2504557]
[2025-12-13 23:03:07] 2025-12-14 04:02:15,548 | INFO     | zombie collector waiting for pid 2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:15,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 23:03:07] 2025-12-14 04:02:15,548 | INFO     | collected zombie processes
[2025-12-13 23:03:07] 2025-12-14 04:02:15,548 | INFO     | will attempt to kill all subprocesses of pid=2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:15,931 | INFO     | process IDs to be killed: [2504557] (in reverse order)
[2025-12-13 23:03:07] 2025-12-14 04:02:16,009 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 23:03:07] 2025-12-14 04:02:16,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 23:03:07] 2025-12-14 04:02:16,018 | INFO     | did not find any defunct processes belonging to 2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:16,027 | INFO     | did not find any defunct processes belonging to 2504557
[2025-12-13 23:03:07] 2025-12-14 04:02:16,027 | INFO     | ready for new job
[2025-12-13 23:03:07] 2025-12-14 04:02:16,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 23:03:07] 2025-12-14 04:02:16,040 | INFO     | ***************************************
[2025-12-13 23:03:07] 2025-12-14 04:02:16,041 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 23:03:07] 2025-12-14 04:02:16,041 | INFO     | ***************************************
[2025-12-13 23:03:07] 2025-12-14 04:02:16,041 | INFO     | 
[2025-12-13 23:03:07] 2025-12-14 04:02:16,062 | INFO     | architecture information:
[2025-12-13 23:03:07] 2025-12-14 04:02:16,067 | INFO     | executing command: cat /etc/os-release
[2025-12-13 23:03:07] 2025-12-14 04:02:16,084 | INFO     | cat /etc/os-release:
[2025-12-13 23:03:07] NAME="CentOS Linux"
[2025-12-13 23:03:07] VERSION="7 (Core)"
[2025-12-13 23:03:07] ID="centos"
[2025-12-13 23:03:07] ID_LIKE="rhel fedora"
[2025-12-13 23:03:07] VERSION_ID="7"
[2025-12-13 23:03:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 23:03:07] ANSI_COLOR="0;31"
[2025-12-13 23:03:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 23:03:07] HOME_URL="https://www.centos.org/"
[2025-12-13 23:03:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 23:03:07] 
[2025-12-13 23:03:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 23:03:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 23:03:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 23:03:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 23:03:07] 
[2025-12-13 23:03:07] 2025-12-14 04:02:16,085 | INFO     | ***************************************
[2025-12-13 23:03:07] 2025-12-14 04:02:16,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 23:03:07] 2025-12-14 04:02:16,665 | INFO     | sufficient remaining disk space (74070360064 B)
[2025-12-13 23:03:07] 2025-12-14 04:02:16,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 23:03:07] 2025-12-14 04:02:16,665 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 23:03:07] 2025-12-14 04:02:16,665 | INFO     | update_server=False
[2025-12-13 23:03:07] 2025-12-14 04:02:16,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 23:03:07] 2025-12-14 04:02:16,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 23:03:07] 2025-12-14 04:02:16,759 | INFO     | all data control threads have been joined
[2025-12-13 23:03:07] 2025-12-14 04:02:16,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 23:03:07] 2025-12-14 04:02:16,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 23:03:07] 2025-12-14 04:02:16,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:03:07] 2025-12-14 04:02:16,811 | INFO     | will abort loop
[2025-12-13 23:03:07] 2025-12-14 04:02:17,209 | INFO     | all payload control threads have been joined
[2025-12-13 23:03:07] 2025-12-14 04:02:17,670 | INFO     | [job] retrieve thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:17,764 | INFO     | [data] control thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:17,812 | INFO     | [job] job monitor thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:17,900 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:17,907 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,031 | INFO     | all job control threads have been joined
[2025-12-13 23:03:07] 2025-12-14 04:02:18,214 | INFO     | [payload] control thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 23:03:07] 2025-12-14 04:02:18,488 | INFO     | [data] copytool_in thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,489 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,671 | INFO     | [data] copytool_out thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,710 | INFO     | [payload] failed_post thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:18,921 | INFO     | [job] validate thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:19,036 | INFO     | [job] control thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:19,052 | INFO     | [payload] validate_post thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:19,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:03:07] 2025-12-14 04:02:20,136 | INFO     | [job] queue monitor thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:22,417 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:27,629 | INFO     | job.realtimelogging is not enabled
[2025-12-13 23:03:07] 2025-12-14 04:02:28,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 23:03:07] 2025-12-14 04:02:40,815 | INFO     | [monitor] cgroup control has ended
[2025-12-13 23:03:07] 2025-12-14 04:02:41,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383209953088)>', '<ExcThread(monitor, started 140382843152128)>']
[2025-12-13 23:03:07] 2025-12-14 04:02:46,088 | INFO     | all workflow threads have been joined
[2025-12-13 23:03:07] 2025-12-14 04:02:46,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 23:03:07] 2025-12-14 04:02:46,088 | INFO     | traces error code: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:46,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 23:03:07] 2025-12-14 04:02:47,553 | INFO     | PID=2495727 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 23:03:07] 2025-12-14 04:02:47,553 | INFO     | .. there are 10 such processes running
[2025-12-13 23:03:07] 2025-12-14 04:02:47,553 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 23:03:07] 2025-12-14 04:02:47,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 23:03:07] 2025-12-14 04:02:47,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 23:03:07] 2025-12-14 04:02:47,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 23:03:07] 2025-12-14 04:02:47,554 | INFO     | [monitor] control thread has ended
[2025-12-13 23:03:07] 2025-12-14 04:02:47,743 [wrapper] ==== pilot stdout END ====
[2025-12-13 23:03:07] 2025-12-14 04:02:47,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 23:03:07] 2025-12-14 04:02:47,752 [wrapper] pilotpid: 2495727
[2025-12-13 23:03:07] 2025-12-14 04:02:47,756 [wrapper] Pilot exit status: 0
[2025-12-13 23:03:07] 2025-12-14 04:02:47,769 [wrapper] pandaids: 6929503308
[2025-12-13 23:03:07] 2025-12-14 04:02:47,823 [wrapper] cleanup supervisor_pilot 2781192 2495728
[2025-12-13 23:03:07] 2025-12-14 04:02:47,839 [wrapper] Test setup, not cleaning
[2025-12-13 23:03:07] 2025-12-14 04:02:47,872 [wrapper] apfmon messages muted
[2025-12-13 23:03:07] 2025-12-14 04:02:47,919 [wrapper] ==== wrapper stdout END ====
[2025-12-13 23:03:07] 2025-12-14 04:02:47,929 [wrapper] ==== wrapper stderr END ====
[2025-12-13 23:03:07]  *** Error codes and diagnostics ***
[2025-12-13 23:03:07]     "exeErrorCode": 0,
[2025-12-13 23:03:07]     "exeErrorDiag": "",
[2025-12-13 23:03:07]     "pilotErrorCode": 0,
[2025-12-13 23:03:07]     "pilotErrorDiag": "",
[2025-12-13 23:03:07]  *** Listing of results directory ***
[2025-12-13 23:03:07] total 382564
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-13 23:03:07] -rwx------. 1 boincer umatlas     36322 Dec 13 12:22 runpilot2-wrapper.sh
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 12:24 queuedata.json
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas       100 Dec 13 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 23:03:07] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 20:11 run_atlas
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas       105 Dec 13 20:11 job.xml
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas 198181863 Dec 13 20:11 EVNT.47898875._000027.pool.root.1
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 20:11 start_atlas.sh
[2025-12-13 23:03:07] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 20:11 shared
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas    592386 Dec 13 20:11 input.tar.gz
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas         0 Dec 13 20:11 boinc_lockfile
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas      2497 Dec 13 20:11 pandaJob.out
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas        57 Dec 13 20:11 setup.sh.local
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas    991736 Dec 13 20:12 agis_schedconf.cvmfs.json
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas   1516240 Dec 13 20:12 agis_ddmendpoints.agis.ALL.json
[2025-12-13 23:03:07] drwx------. 5 boincer umatlas      4096 Dec 13 20:12 pilot3
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas      6843 Dec 13 22:57 init_data.xml
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas 186028798 Dec 13 23:01 HITS.47898878._000661.pool.root.1
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas       531 Dec 13 23:01 boinc_task_state.xml
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas      1035 Dec 13 23:02 memory_monitor_summary.json
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas    401411 Dec 13 23:02 log.47898878._000661.job.log.tgz.1
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas      7810 Dec 13 23:02 heartbeat.json
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas        95 Dec 13 23:02 pilot_heartbeat.json
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas       823 Dec 13 23:02 pilotlog.txt
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas   1405096 Dec 13 23:02 log.47898878._000661.job.log.1
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas       357 Dec 13 23:02 output.list
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas       620 Dec 13 23:02 runtime_log
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas   1822720 Dec 13 23:02 result.tar.gz
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas      9353 Dec 13 23:02 runtime_log.err
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas       657 Dec 13 23:02 fhlLDm2Uio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk1PKDmr1WJgn.diag
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas        28 Dec 13 23:03 wrapper_checkpoint.txt
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 23:03 boinc_mmap_file
[2025-12-13 23:03:07] -rw-r--r--. 1 boincer umatlas     21453 Dec 13 23:03 stderr.txt
[2025-12-13 23:03:07] HITS file was successfully produced:
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas 186028798 Dec 13 23:01 shared/HITS.pool.root.1
[2025-12-13 23:03:07]  *** Contents of shared directory: ***
[2025-12-13 23:03:07] total 377596
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas 198181863 Dec 13 20:11 ATLAS.root_0
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 20:11 start_atlas.sh
[2025-12-13 23:03:07] -rw-r--r--. 2 boincer umatlas    592386 Dec 13 20:11 input.tar.gz
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas 186028798 Dec 13 23:01 HITS.pool.root.1
[2025-12-13 23:03:07] -rw-------. 1 boincer umatlas   1822720 Dec 13 23:02 result.tar.gz
23:03:09 (2490154): run_atlas exited; CPU time 40404.963160
23:03:09 (2490154): called boinc_finish(0)

</stderr_txt>
]]>

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