Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:41 (23259): wrapper (7.7.26015): starting
06:24:41 (23259): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 06:24:41] Arguments: --nthreads 8
[2025-12-14 06:24:41] Threads: 8
[2025-12-14 06:24:41] Checking for CVMFS
[2025-12-14 06:24:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 06:24:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 06:24:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 06:24:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 06:24:43] 2.11.2.0 31726 310704 140804 153985 2 60 13976063 25165824 4168 130560 9 152169576 99.871 85389853 2577 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 06:24:43] CVMFS is ok
[2025-12-14 06:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 06:24:43] Checking for apptainer binary...
[2025-12-14 06:24:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 06:24:43] Running /usr/bin/apptainer --version
[2025-12-14 06:24:43] apptainer version 1.3.2-1.el7
[2025-12-14 06:24:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 06:24:49] cg-vwn427.simple-grid.lan
[2025-12-14 06:24:49] apptainer works
[2025-12-14 06:24:49] Set ATHENA_PROC_NUMBER=8
[2025-12-14 06:24:49] Set ATHENA_CORE_NUMBER=8
[2025-12-14 06:24:49] Starting ATLAS job with PandaID=6929502819
[2025-12-14 06:24:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 10:25:16]  *** The last 200 lines of the pilot log: ***
[2025-12-14 10:25:17] 2025-12-14 09:24:38,687 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 10:25:17] 2025-12-14 09:24:38,688 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 10:25:17] 2025-12-14 09:24:38,690 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6929502819/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,691 | INFO     | extracted standard info from prmon json
[2025-12-14 10:25:17] 2025-12-14 09:24:38,691 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 10:25:17] 2025-12-14 09:24:38,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 10:25:17] 2025-12-14 09:24:38,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 10:25:17] 2025-12-14 09:24:38,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 10:25:17] 2025-12-14 09:24:38,697 | INFO     | fitting pss+swap vs Time
[2025-12-14 10:25:17] 2025-12-14 09:24:38,707 | INFO     | sum of square deviations: 3438620752.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,709 | INFO     | sum of deviations: 33138552071.999992
[2025-12-14 10:25:17] 2025-12-14 09:24:38,709 | INFO     | mean x: 1765697350.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,709 | INFO     | mean y: 2465002.053811659
[2025-12-14 10:25:17] 2025-12-14 09:24:38,709 | INFO     | intersect: -17013849909.18924
[2025-12-14 10:25:17] 2025-12-14 09:24:38,710 | INFO     | chi2: 4.817790125107375
[2025-12-14 10:25:17] 2025-12-14 09:24:38,710 | INFO     | sum of square deviations: 3212467674.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,712 | INFO     | sum of deviations: 47516046715.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,712 | INFO     | mean x: 1765697197.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,713 | INFO     | mean y: 2474510.243119266
[2025-12-14 10:25:17] 2025-12-14 09:24:38,713 | INFO     | intersect: -26114193118.138783
[2025-12-14 10:25:17] 2025-12-14 09:24:38,713 | INFO     | chi2: 4.031499717648367
[2025-12-14 10:25:17] 2025-12-14 09:24:38,713 | INFO     | current chi2=4.031499717648367 (change=16.32056164840688 %)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,713 | INFO     | right removable region: 217
[2025-12-14 10:25:17] 2025-12-14 09:24:38,714 | INFO     | sum of square deviations: 3212467674.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,716 | INFO     | sum of deviations: -32657150990.999996
[2025-12-14 10:25:17] 2025-12-14 09:24:38,716 | INFO     | mean x: 1765697502.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,716 | INFO     | mean y: 2509277.146788991
[2025-12-14 10:25:17] 2025-12-14 09:24:38,731 | INFO     | intersect: 17952152911.319363
[2025-12-14 10:25:17] 2025-12-14 09:24:38,731 | INFO     | chi2: 1.395250620397817
[2025-12-14 10:25:17] 2025-12-14 09:24:38,731 | INFO     | current chi2=1.395250620397817 (change=71.03961392741822 %)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,732 | INFO     | sum of square deviations: 2996454322.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,734 | INFO     | sum of deviations: -48867008744.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,734 | INFO     | mean x: 1765697655.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,734 | INFO     | mean y: 2520607.352112676
[2025-12-14 10:25:17] 2025-12-14 09:24:38,734 | INFO     | intersect: 28798008031.48689
[2025-12-14 10:25:17] 2025-12-14 09:24:38,735 | INFO     | chi2: 1.0294681619300214
[2025-12-14 10:25:17] 2025-12-14 09:24:38,735 | INFO     | current chi2=1.0294681619300214 (change=26.216254852013815 %)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,735 | INFO     | sum of square deviations: 2790348132.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,737 | INFO     | sum of deviations: -44666535080.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,737 | INFO     | mean x: 1765697807.5
[2025-12-14 10:25:17] 2025-12-14 09:24:38,737 | INFO     | mean y: 2517469.1346153845
[2025-12-14 10:25:17] 2025-12-14 09:24:38,737 | INFO     | intersect: 28266948761.74504
[2025-12-14 10:25:17] 2025-12-14 09:24:38,738 | INFO     | chi2: 1.0180720082872208
[2025-12-14 10:25:17] 2025-12-14 09:24:38,738 | INFO     | current chi2=1.0180720082872208 (change=1.10699427765065 %)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,738 | INFO     | left removable region: 30
[2025-12-14 10:25:17] 2025-12-14 09:24:38,738 | INFO     | sum of square deviations: 2027639878.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,740 | INFO     | sum of deviations: -8301689958.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,740 | INFO     | mean x: 1765698082.0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,740 | INFO     | mean y: 2510683.304812834
[2025-12-14 10:25:17] 2025-12-14 09:24:38,740 | INFO     | intersect: 7231742163.333566
[2025-12-14 10:25:17] 2025-12-14 09:24:38,741 | INFO     | chi2: 0.09211206219813362
[2025-12-14 10:25:17] 2025-12-14 09:24:38,741 | INFO     | current memory leak: -4.09 B/s (using 187 data points, chi2=0.09)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,742 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,742 | INFO     | ..............................
[2025-12-14 10:25:17] 2025-12-14 09:24:38,742 | INFO     | . Timing measurements:
[2025-12-14 10:25:17] 2025-12-14 09:24:38,742 | INFO     | . get job = 0 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,742 | INFO     | . initial setup = 5 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | . payload setup = 137 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | . stage-in = 0 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | . payload execution = 13759 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | . stage-out = 3 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | . log creation = 1 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,743 | INFO     | ..............................
[2025-12-14 10:25:17] 2025-12-14 09:24:38,875 | INFO     | 
[2025-12-14 10:25:17] 2025-12-14 09:24:38,875 | INFO     | job summary report
[2025-12-14 10:25:17] 2025-12-14 09:24:38,875 | INFO     | --------------------------------------------------
[2025-12-14 10:25:17] 2025-12-14 09:24:38,875 | INFO     | PanDA job id: 6929502819
[2025-12-14 10:25:17] 2025-12-14 09:24:38,875 | INFO     | task id: 47898878
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | errors: (none)
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | pilot state: finished 
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | transexitcode: 0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | exeerrorcode: 0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | exeerrordiag: 
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | exitcode: 0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | exitmsg: OK
[2025-12-14 10:25:17] 2025-12-14 09:24:38,876 | INFO     | cpuconsumptiontime: 51752 s
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | nevents: 400
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | neventsw: 0
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | pid: 1240
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | pgrp: 1240
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | corecount: 8
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | event service: False
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | sizes: {0: 2283768, 1: 2283967, 12: 2283967, 23: 2283995, 33: 2284023, 44: 2284079, 55: 2284235, 66: 2284263, 76: 2284291, 86: 2284609, 87: 2284637, 13901: 2314844
[2025-12-14 10:25:17] 2025-12-14 09:24:38,877 | INFO     | --------------------------------------------------
[2025-12-14 10:25:17] 2025-12-14 09:24:38,878 | INFO     | 
[2025-12-14 10:25:17] 2025-12-14 09:24:38,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-14 10:25:17] 2025-12-14 09:24:39,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 10:25:17] 2025-12-14 09:24:39,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 10:25:17] 2025-12-14 09:24:39,004 | INFO     | job 6929502819 has completed (purged errors)
[2025-12-14 10:25:17] 2025-12-14 09:24:39,004 | INFO     | overall cleanup function is called
[2025-12-14 10:25:17] 2025-12-14 09:24:40,013 | INFO     | --- collectZombieJob: --- 10, [1240]
[2025-12-14 10:25:17] 2025-12-14 09:24:40,014 | INFO     | zombie collector waiting for pid 1240
[2025-12-14 10:25:17] 2025-12-14 09:24:40,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 10:25:17] 2025-12-14 09:24:40,014 | INFO     | collected zombie processes
[2025-12-14 10:25:17] 2025-12-14 09:24:40,014 | INFO     | will attempt to kill all subprocesses of pid=1240
[2025-12-14 10:25:17] 2025-12-14 09:24:40,108 | INFO     | process IDs to be killed: [1240] (in reverse order)
[2025-12-14 10:25:17] 2025-12-14 09:24:40,717 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 10:25:17] 2025-12-14 09:24:40,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 10:25:17] 2025-12-14 09:24:40,721 | INFO     | did not find any defunct processes belonging to 1240
[2025-12-14 10:25:17] 2025-12-14 09:24:40,723 | INFO     | did not find any defunct processes belonging to 1240
[2025-12-14 10:25:17] 2025-12-14 09:24:40,723 | INFO     | ready for new job
[2025-12-14 10:25:17] 2025-12-14 09:24:40,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 10:25:17] 2025-12-14 09:24:40,726 | INFO     | ***************************************
[2025-12-14 10:25:17] 2025-12-14 09:24:40,726 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 10:25:17] 2025-12-14 09:24:40,726 | INFO     | ***************************************
[2025-12-14 10:25:17] 2025-12-14 09:24:40,726 | INFO     | 
[2025-12-14 10:25:17] 2025-12-14 09:24:40,727 | INFO     | pilot is running in a VM
[2025-12-14 10:25:17] 2025-12-14 09:24:40,727 | INFO     | architecture information:
[2025-12-14 10:25:17] 2025-12-14 09:24:40,744 | INFO     | executing command: cat /etc/os-release
[2025-12-14 10:25:17] 2025-12-14 09:24:40,933 | INFO     | cat /etc/os-release:
[2025-12-14 10:25:17] NAME="CentOS Linux"
[2025-12-14 10:25:17] VERSION="7 (Core)"
[2025-12-14 10:25:17] ID="centos"
[2025-12-14 10:25:17] ID_LIKE="rhel fedora"
[2025-12-14 10:25:17] VERSION_ID="7"
[2025-12-14 10:25:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 10:25:17] ANSI_COLOR="0;31"
[2025-12-14 10:25:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 10:25:17] HOME_URL="https://www.centos.org/"
[2025-12-14 10:25:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 10:25:17] 
[2025-12-14 10:25:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 10:25:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 10:25:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 10:25:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 10:25:17] 
[2025-12-14 10:25:17] 2025-12-14 09:24:40,933 | INFO     | ***************************************
[2025-12-14 10:25:17] 2025-12-14 09:24:41,437 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-14 10:25:17] 2025-12-14 09:24:41,739 | INFO     | sufficient remaining disk space (497401462784 B)
[2025-12-14 10:25:17] 2025-12-14 09:24:41,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 10:25:17] 2025-12-14 09:24:41,740 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 10:25:17] 2025-12-14 09:24:41,740 | INFO     | update_server=False
[2025-12-14 10:25:17] 2025-12-14 09:24:41,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 10:25:17] 2025-12-14 09:24:41,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:25:17] 2025-12-14 09:24:41,745 | INFO     | aborting loop
[2025-12-14 10:25:17] 2025-12-14 09:24:41,804 | INFO     | all payload control threads have been joined
[2025-12-14 10:25:17] 2025-12-14 09:24:42,254 | INFO     | all job control threads have been joined
[2025-12-14 10:25:17] 2025-12-14 09:24:42,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 10:25:17] 2025-12-14 09:24:42,485 | INFO     | all data control threads have been joined
[2025-12-14 10:25:17] 2025-12-14 09:24:42,748 | INFO     | [job] retrieve thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:42,750 | INFO     | [job] job monitor thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:42,811 | INFO     | [payload] control thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:42,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:42,946 | INFO     | [payload] failed_post thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:42,971 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,174 | INFO     | [data] copytool_in thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,224 | INFO     | [job] validate thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,261 | INFO     | [job] control thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,492 | INFO     | [data] control thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,684 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,717 | INFO     | [payload] validate_post thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:43,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:25:17] 2025-12-14 09:24:44,243 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:44,420 | INFO     | [data] copytool_out thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:44,896 | INFO     | [job] queue monitor thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:44,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 10:25:17] 2025-12-14 09:24:46,496 | INFO     | [monitor] cgroup control has ended
[2025-12-14 10:25:17] 2025-12-14 09:24:48,994 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 10:25:17] 2025-12-14 09:24:50,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728064005952)>', '<ExcThread(monitor, started 139727466379008)>']
[2025-12-14 10:25:17] 2025-12-14 09:24:55,083 | INFO     | all workflow threads have been joined
[2025-12-14 10:25:17] 2025-12-14 09:24:55,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 10:25:17] 2025-12-14 09:24:55,083 | INFO     | traces error code: 0
[2025-12-14 10:25:17] 2025-12-14 09:24:55,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 10:25:17] 2025-12-14 09:25:11,887 | INFO     | PID=27029 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 10:25:17] 2025-12-14 09:25:11,888 | INFO     | .. there are 9 such processes running
[2025-12-14 10:25:17] 2025-12-14 09:25:11,889 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 10:25:17] 2025-12-14 09:25:11,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 10:25:17] 2025-12-14 09:25:11,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 10:25:17] 2025-12-14 09:25:11,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 10:25:17] 2025-12-14 09:25:11,890 | CRITICAL | thread 'MainThread' is not alive
[2025-12-14 10:25:17] 2025-12-14 09:25:11,890 | INFO     | [monitor] control thread has ended
[2025-12-14 10:25:17] 2025-12-14 09:25:12,210 [wrapper] ==== pilot stdout END ====
[2025-12-14 10:25:17] 2025-12-14 09:25:12,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 10:25:17] 2025-12-14 09:25:12,454 [wrapper] pilotpid: 27029
[2025-12-14 10:25:17] 2025-12-14 09:25:12,556 [wrapper] Pilot exit status: 0
[2025-12-14 10:25:17] 2025-12-14 09:25:13,037 [wrapper] pandaids: 6929502819
[2025-12-14 10:25:17] 2025-12-14 09:25:13,925 [wrapper] cleanup supervisor_pilot 25349 27030
[2025-12-14 10:25:17] 2025-12-14 09:25:14,013 [wrapper] Test setup, not cleaning
[2025-12-14 10:25:17] 2025-12-14 09:25:14,097 [wrapper] apfmon messages muted
[2025-12-14 10:25:17] 2025-12-14 09:25:14,197 [wrapper] ==== wrapper stdout END ====
[2025-12-14 10:25:17] 2025-12-14 09:25:14,281 [wrapper] ==== wrapper stderr END ====
[2025-12-14 10:25:17]  *** Error codes and diagnostics ***
[2025-12-14 10:25:17]     "exeErrorCode": 0,
[2025-12-14 10:25:17]     "exeErrorDiag": "",
[2025-12-14 10:25:17]     "pilotErrorCode": 0,
[2025-12-14 10:25:17]     "pilotErrorDiag": "",
[2025-12-14 10:25:17]  *** Listing of results directory ***
[2025-12-14 10:25:17] total 371760
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc    579449 Dec 13 18:18 pilot3.tar.gz
[2025-12-14 10:25:17] -rwx------. 1 boinc boinc     36322 Dec 13 18:22 runpilot2-wrapper.sh
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc      5112 Dec 13 18:24 queuedata.json
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc       100 Dec 14 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 10:25:17] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 06:24 run_atlas
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc       105 Dec 14 06:24 job.xml
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc      6392 Dec 14 06:24 init_data.xml
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc 196307342 Dec 14 06:24 EVNT.47898875._000012.pool.root.1
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc     15847 Dec 14 06:24 start_atlas.sh
[2025-12-14 10:25:17] drwxrwx--x. 2 boinc boinc        68 Dec 14 06:24 shared
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc    592391 Dec 14 06:24 input.tar.gz
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc         0 Dec 14 06:24 boinc_lockfile
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc      2497 Dec 14 06:24 pandaJob.out
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc    991736 Dec 14 06:28 agis_schedconf.cvmfs.json
[2025-12-14 10:25:17] drwx------. 5 boinc boinc      4096 Dec 14 06:28 pilot3
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc 175804243 Dec 14 10:21 HITS.47898878._000290.pool.root.1
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc       531 Dec 14 10:22 boinc_task_state.xml
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc      1027 Dec 14 10:22 memory_monitor_summary.json
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc   1516240 Dec 14 10:23 agis_ddmendpoints.agis.ALL.json
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc    452909 Dec 14 10:23 log.47898878._000290.job.log.tgz.1
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc      7766 Dec 14 10:24 heartbeat.json
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc        95 Dec 14 10:25 pilot_heartbeat.json
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc       890 Dec 14 10:25 pilotlog.txt
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc      8192 Dec 14 10:25 boinc_mmap_file
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc        28 Dec 14 10:25 wrapper_checkpoint.txt
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc   1888246 Dec 14 10:25 log.47898878._000290.job.log.1
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc       357 Dec 14 10:25 output.list
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc       620 Dec 14 10:25 runtime_log
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc   2355200 Dec 14 10:25 result.tar.gz
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc      8833 Dec 14 10:25 runtime_log.err
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc       656 Dec 14 10:25 MQ4MDmpUio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW0PKDm7s7cRo.diag
[2025-12-14 10:25:17] -rw-r--r--. 1 boinc boinc     20730 Dec 14 10:25 stderr.txt
[2025-12-14 10:25:17] HITS file was successfully produced:
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc 175804243 Dec 14 10:21 shared/HITS.pool.root.1
[2025-12-14 10:25:17]  *** Contents of shared directory: ***
[2025-12-14 10:25:17] total 366288
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc 196307342 Dec 14 06:24 ATLAS.root_0
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc     15847 Dec 14 06:24 start_atlas.sh
[2025-12-14 10:25:17] -rw-r--r--. 2 boinc boinc    592391 Dec 14 06:24 input.tar.gz
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc 175804243 Dec 14 10:21 HITS.pool.root.1
[2025-12-14 10:25:17] -rw-------. 1 boinc boinc   2355200 Dec 14 10:25 result.tar.gz
10:25:18 (23259): run_atlas exited; CPU time 51942.551461
10:25:18 (23259): called boinc_finish(0)

</stderr_txt>
]]>

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