Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:04:57 (3928770): wrapper (7.7.26015): starting
21:04:57 (3928770): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 21:04:57] Arguments: --nthreads 9
[2025-12-13 21:04:57] Threads: 9
[2025-12-13 21:04:57] Checking for CVMFS
[2025-12-13 21:04:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 21:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 21:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 21:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 21:05:00] 2.13.3.0 11601 55346 342084 153979 3 520 20574136 32935937 21249 16776704 0 198952650 99.444 286732490 38786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 21:05:00] CVMFS is ok
[2025-12-13 21:05:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 21:05:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 21:05:00] Further information can be found at the LHC@home message board.
[2025-12-13 21:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 21:05:00] Checking for apptainer binary...
[2025-12-13 21:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 21:05:00] Running /usr/bin/apptainer --version
[2025-12-13 21:05:00] apptainer version 1.4.5-2.el9
[2025-12-13 21:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 21:05:01] c6-6-39-4.aglt2.org
[2025-12-13 21:05:01] apptainer works
[2025-12-13 21:05:02] Set ATHENA_PROC_NUMBER=9
[2025-12-13 21:05:02] Set ATHENA_CORE_NUMBER=9
[2025-12-13 21:05:02] Starting ATLAS job with PandaID=6929344122
[2025-12-13 21:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:57:00]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:57:00] 2025-12-14 10:55:49,993 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2928.961910714286
[2025-12-14 05:57:00] 2025-12-14 10:55:50,065 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929344122/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,098 | INFO     | extracted standard info from prmon json
[2025-12-14 05:57:00] 2025-12-14 10:55:50,099 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:57:00] 2025-12-14 10:55:50,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:57:00] 2025-12-14 10:55:50,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:57:00] 2025-12-14 10:55:50,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:57:00] 2025-12-14 10:55:50,142 | INFO     | fitting pss+swap vs Time
[2025-12-14 05:57:00] 2025-12-14 10:55:50,143 | INFO     | sum of square deviations: 42850308471.20695
[2025-12-14 05:57:00] 2025-12-14 10:55:50,208 | INFO     | sum of deviations: 185850743720.78903
[2025-12-14 05:57:00] 2025-12-14 10:55:50,208 | INFO     | mean x: 1765693942.9264991
[2025-12-14 05:57:00] 2025-12-14 10:55:50,212 | INFO     | mean y: 2500765.33655706
[2025-12-14 05:57:00] 2025-12-14 10:55:50,213 | INFO     | intersect: -7655682902.03855
[2025-12-14 05:57:00] 2025-12-14 10:55:50,213 | INFO     | chi2: 4.9561414608663075
[2025-12-14 05:57:00] 2025-12-14 10:55:50,214 | INFO     | sum of square deviations: 41619118019.46875
[2025-12-14 05:57:00] 2025-12-14 10:55:50,232 | INFO     | monitor loop #1594: job 0:6929344122 is in state 'finished'
[2025-12-14 05:57:00] 2025-12-14 10:55:50,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,254 | INFO     | sum of deviations: 249750776514.375
[2025-12-14 05:57:00] 2025-12-14 10:55:50,254 | INFO     | mean x: 1765693790.4296875
[2025-12-14 05:57:00] 2025-12-14 10:55:50,254 | INFO     | mean y: 2508631.84375
[2025-12-14 05:57:00] 2025-12-14 10:55:50,254 | INFO     | intersect: -10593184314.848192
[2025-12-14 05:57:00] 2025-12-14 10:55:50,255 | INFO     | chi2: 3.5726928317939537
[2025-12-14 05:57:00] 2025-12-14 10:55:50,255 | INFO     | current chi2=3.5726928317939537 (change=27.91382449423738 %)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,256 | INFO     | sum of square deviations: 40411585920.00007
[2025-12-14 05:57:00] 2025-12-14 10:55:50,334 | INFO     | sum of deviations: 246743861462.76953
[2025-12-14 05:57:00] 2025-12-14 10:55:50,334 | INFO     | mean x: 1765693637.9230769
[2025-12-14 05:57:00] 2025-12-14 10:55:50,334 | INFO     | mean y: 2508252.071005917
[2025-12-14 05:57:00] 2025-12-14 10:55:50,335 | INFO     | intersect: -10778411537.71052
[2025-12-14 05:57:00] 2025-12-14 10:55:50,335 | INFO     | chi2: 3.57302612420945
[2025-12-14 05:57:00] 2025-12-14 10:55:50,335 | INFO     | current chi2=3.57302612420945 (change=-0.009328885274719298 %)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,336 | INFO     | right removable region: 506
[2025-12-14 05:57:00] 2025-12-14 10:55:50,336 | INFO     | sum of square deviations: 41618920681.872925
[2025-12-14 05:57:00] 2025-12-14 10:55:50,384 | INFO     | sum of deviations: 46415326266.09954
[2025-12-14 05:57:00] 2025-12-14 10:55:50,385 | INFO     | mean x: 1765694095.4355469
[2025-12-14 05:57:00] 2025-12-14 10:55:50,385 | INFO     | mean y: 2518010.97265625
[2025-12-14 05:57:00] 2025-12-14 10:55:50,385 | INFO     | intersect: -1966664903.505516
[2025-12-14 05:57:00] 2025-12-14 10:55:50,385 | INFO     | chi2: 2.246205982148825
[2025-12-14 05:57:00] 2025-12-14 10:55:50,386 | INFO     | current chi2=2.246205982148825 (change=54.678331926462 %)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,386 | INFO     | sum of square deviations: 40411441113.104515
[2025-12-14 05:57:00] 2025-12-14 10:55:50,438 | INFO     | sum of deviations: -13780989214.792862
[2025-12-14 05:57:00] 2025-12-14 10:55:50,438 | INFO     | mean x: 1765694247.9388561
[2025-12-14 05:57:00] 2025-12-14 10:55:50,439 | INFO     | mean y: 2525612.426035503
[2025-12-14 05:57:00] 2025-12-14 10:55:50,439 | INFO     | intersect: 604657402.7614344
[2025-12-14 05:57:00] 2025-12-14 10:55:50,439 | INFO     | chi2: 1.7633569137175402
[2025-12-14 05:57:00] 2025-12-14 10:55:50,439 | INFO     | current chi2=1.7633569137175402 (change=21.496206147994005 %)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,440 | INFO     | left removable region: 20
[2025-12-14 05:57:00] 2025-12-14 10:55:50,440 | INFO     | sum of square deviations: 35594868316.000046
[2025-12-14 05:57:00] 2025-12-14 10:55:50,483 | INFO     | sum of deviations: -8832666517.888893
[2025-12-14 05:57:00] 2025-12-14 10:55:50,483 | INFO     | mean x: 1765694217.4444444
[2025-12-14 05:57:00] 2025-12-14 10:55:50,483 | INFO     | mean y: 2541633.70781893
[2025-12-14 05:57:00] 2025-12-14 10:55:50,483 | INFO     | intersect: 440688729.99139196
[2025-12-14 05:57:00] 2025-12-14 10:55:50,484 | INFO     | chi2: 0.07809072264043822
[2025-12-14 05:57:00] 2025-12-14 10:55:50,484 | INFO     | current memory leak: -0.25 B/s (using 486 data points, chi2=0.08)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,485 | INFO     | could have reported an average CPU frequency of 2869 MHz (21 samples)
[2025-12-14 05:57:00] 2025-12-14 10:55:50,486 | INFO     | ..............................
[2025-12-14 05:57:00] 2025-12-14 10:55:50,486 | INFO     | . Timing measurements:
[2025-12-14 05:57:00] 2025-12-14 10:55:50,486 | INFO     | . get job = 1 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,507 | INFO     | . initial setup = 12 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | . payload setup = 59 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | . stage-in = 0 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | . payload execution = 31520 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | . stage-out = 8 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | . log creation = 1 s
[2025-12-14 05:57:00] 2025-12-14 10:55:50,508 | INFO     | ..............................
[2025-12-14 05:57:00] 2025-12-14 10:55:50,532 | INFO     | time since job start (31738s) is within the limit (174528.0s)
[2025-12-14 05:57:00] 2025-12-14 10:55:51,390 | INFO     | 
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | job summary report
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | --------------------------------------------------
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | PanDA job id: 6929344122
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | task id: 47886831
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | errors: (none)
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | pilot state: finished 
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | transexitcode: 0
[2025-12-14 05:57:00] 2025-12-14 10:55:51,391 | INFO     | exeerrorcode: 0
[2025-12-14 05:57:00] 2025-12-14 10:55:51,392 | INFO     | exeerrordiag: 
[2025-12-14 05:57:00] 2025-12-14 10:55:51,392 | INFO     | exitcode: 0
[2025-12-14 05:57:00] 2025-12-14 10:55:51,392 | INFO     | exitmsg: OK
[2025-12-14 05:57:00] 2025-12-14 10:55:51,393 | INFO     | cpuconsumptiontime: 44065 s
[2025-12-14 05:57:00] 2025-12-14 10:55:51,393 | INFO     | nevents: 400
[2025-12-14 05:57:00] 2025-12-14 10:55:51,393 | INFO     | neventsw: 0
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | pid: 3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | pgrp: 3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | corecount: 9
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | event service: False
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | sizes: {0: 2283756, 1: 2283812, 2: 2283868, 3: 2284039, 4: 2284067, 14: 2284095, 26: 2284251, 37: 2284279, 46: 2284569, 48: 2284597, 31587: 2322796, 31588: 2323075
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | --------------------------------------------------
[2025-12-14 05:57:00] 2025-12-14 10:55:51,394 | INFO     | 
[2025-12-14 05:57:00] 2025-12-14 10:55:51,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,679 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:57:00] 2025-12-14 10:55:51,680 | INFO     | job 6929344122 has completed (purged errors)
[2025-12-14 05:57:00] 2025-12-14 10:55:51,680 | INFO     | overall cleanup function is called
[2025-12-14 05:57:00] 2025-12-14 10:55:52,696 | INFO     | --- collectZombieJob: --- 10, [3947108]
[2025-12-14 05:57:00] 2025-12-14 10:55:52,697 | INFO     | zombie collector waiting for pid 3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:52,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:57:00] 2025-12-14 10:55:52,732 | INFO     | collected zombie processes
[2025-12-14 05:57:00] 2025-12-14 10:55:52,732 | INFO     | will attempt to kill all subprocesses of pid=3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:56,517 | INFO     | process IDs to be killed: [3947108] (in reverse order)
[2025-12-14 05:57:00] 2025-12-14 10:55:57,005 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:57:00] 2025-12-14 10:55:57,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:57:00] 2025-12-14 10:55:57,063 | INFO     | did not find any defunct processes belonging to 3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:57,159 | INFO     | did not find any defunct processes belonging to 3947108
[2025-12-14 05:57:00] 2025-12-14 10:55:57,159 | INFO     | ready for new job
[2025-12-14 05:57:00] 2025-12-14 10:55:57,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:57:00] 2025-12-14 10:55:57,183 | INFO     | ***************************************
[2025-12-14 05:57:00] 2025-12-14 10:55:57,183 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:57:00] 2025-12-14 10:55:57,183 | INFO     | ***************************************
[2025-12-14 05:57:00] 2025-12-14 10:55:57,183 | INFO     | 
[2025-12-14 05:57:00] 2025-12-14 10:55:57,205 | INFO     | architecture information:
[2025-12-14 05:57:00] 2025-12-14 10:55:57,217 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:57:00] 2025-12-14 10:55:57,339 | INFO     | cat /etc/os-release:
[2025-12-14 05:57:00] NAME="CentOS Linux"
[2025-12-14 05:57:00] VERSION="7 (Core)"
[2025-12-14 05:57:00] ID="centos"
[2025-12-14 05:57:00] ID_LIKE="rhel fedora"
[2025-12-14 05:57:00] VERSION_ID="7"
[2025-12-14 05:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:57:00] ANSI_COLOR="0;31"
[2025-12-14 05:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:57:00] HOME_URL="https://www.centos.org/"
[2025-12-14 05:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:57:00] 
[2025-12-14 05:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:57:00] 
[2025-12-14 05:57:00] 2025-12-14 10:55:57,339 | INFO     | ***************************************
[2025-12-14 05:57:00] 2025-12-14 10:55:57,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 05:57:00] 2025-12-14 10:55:57,981 | INFO     | sufficient remaining disk space (74977378304 B)
[2025-12-14 05:57:00] 2025-12-14 10:55:57,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:57:00] 2025-12-14 10:55:57,981 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:57:00] 2025-12-14 10:55:57,981 | INFO     | update_server=False
[2025-12-14 05:57:00] 2025-12-14 10:55:57,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:57:00] 2025-12-14 10:55:57,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:57:00] 2025-12-14 10:55:58,436 | INFO     | all job control threads have been joined
[2025-12-14 05:57:00] 2025-12-14 10:55:58,497 | INFO     | all data control threads have been joined
[2025-12-14 05:57:00] 2025-12-14 10:55:58,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:57:00] 2025-12-14 10:55:58,939 | INFO     | aborting loop
[2025-12-14 05:57:00] 2025-12-14 10:55:58,987 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,149 | INFO     | [job] validate thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,256 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,308 | INFO     | all payload control threads have been joined
[2025-12-14 05:57:00] 2025-12-14 10:55:59,442 | INFO     | [job] control thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,511 | INFO     | [data] control thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,650 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:55:59,944 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,002 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,007 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,095 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,239 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:57:00] 2025-12-14 10:56:00,314 | INFO     | [payload] control thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:00,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:57:00] 2025-12-14 10:56:00,512 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:01,433 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:04,300 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:57:00] 2025-12-14 10:56:25,385 | INFO     | PID=3935135 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 05:57:00] 2025-12-14 10:56:25,385 | INFO     | .. there are 25 such processes running
[2025-12-14 05:57:00] 2025-12-14 10:56:25,385 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:57:00] 2025-12-14 10:56:25,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:57:00] 2025-12-14 10:56:25,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:57:00] 2025-12-14 10:56:51,628 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:57:00] 2025-12-14 10:56:51,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603804649280)>', '<ExcThread(monitor, started 140603295770368)>']
[2025-12-14 05:57:00] 2025-12-14 10:56:52,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:57:00] 2025-12-14 10:56:52,561 | INFO     | [monitor] control thread has ended
[2025-12-14 05:57:00] 2025-12-14 10:56:56,854 | INFO     | all workflow threads have been joined
[2025-12-14 05:57:00] 2025-12-14 10:56:56,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:57:00] 2025-12-14 10:56:56,855 | INFO     | traces error code: 0
[2025-12-14 05:57:00] 2025-12-14 10:56:56,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:57:00] 2025-12-14 10:56:58,509 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:57:00] 2025-12-14 10:56:58,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:57:00] 2025-12-14 10:56:58,586 [wrapper] pilotpid: 3935135
[2025-12-14 05:57:00] 2025-12-14 10:56:58,629 [wrapper] Pilot exit status: 0
[2025-12-14 05:57:00] 2025-12-14 10:56:58,730 [wrapper] pandaids: 6929344122
[2025-12-14 05:57:00] 2025-12-14 10:56:59,432 [wrapper] cleanup supervisor_pilot 1542124 3935136
[2025-12-14 05:57:00] 2025-12-14 10:56:59,500 [wrapper] Test setup, not cleaning
[2025-12-14 05:57:00] 2025-12-14 10:56:59,563 [wrapper] apfmon messages muted
[2025-12-14 05:57:00] 2025-12-14 10:56:59,614 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:57:00] 2025-12-14 10:56:59,662 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:57:00]  *** Error codes and diagnostics ***
[2025-12-14 05:57:00]     "exeErrorCode": 0,
[2025-12-14 05:57:00]     "exeErrorDiag": "",
[2025-12-14 05:57:00]     "pilotErrorCode": 0,
[2025-12-14 05:57:00]     "pilotErrorDiag": "",
[2025-12-14 05:57:00]  *** Listing of results directory ***
[2025-12-14 05:57:00] total 339060
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-14 05:57:00] -rwx------. 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 12:21 queuedata.json
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas       100 Dec 13 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:57:00] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 21:04 run_atlas
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas       105 Dec 13 21:04 job.xml
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas 192558672 Dec 13 21:04 EVNT.47886829._000250.pool.root.1
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 21:04 start_atlas.sh
[2025-12-14 05:57:00] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 21:04 shared
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas    592414 Dec 13 21:04 input.tar.gz
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas         0 Dec 13 21:04 boinc_lockfile
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas      2534 Dec 13 21:05 pandaJob.out
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas        57 Dec 13 21:05 setup.sh.local
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas    991744 Dec 13 21:06 agis_schedconf.cvmfs.json
[2025-12-14 05:57:00] drwx------. 5 boincer umatlas      4096 Dec 13 21:06 pilot3
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas      6843 Dec 14 05:47 init_data.xml
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas 142380585 Dec 14 05:52 HITS.47886831._006242.pool.root.1
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas       531 Dec 14 05:53 boinc_task_state.xml
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas      1040 Dec 14 05:54 memory_monitor_summary.json
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas   1516240 Dec 14 05:54 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas    640460 Dec 14 05:54 log.47886831._006242.job.log.tgz.1
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas        95 Dec 14 05:55 pilot_heartbeat.json
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas      7820 Dec 14 05:55 heartbeat.json
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas      4824 Dec 14 05:56 pilotlog.txt
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 05:56 boinc_mmap_file
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas        28 Dec 14 05:56 wrapper_checkpoint.txt
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas   3527097 Dec 14 05:56 log.47886831._006242.job.log.1
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas       357 Dec 14 05:57 output.list
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas       620 Dec 14 05:57 runtime_log
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas   4188160 Dec 14 05:57 result.tar.gz
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas      9348 Dec 14 05:57 runtime_log.err
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas       658 Dec 14 05:57 P9iKDmSTio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhtPKDmDWaoWm.diag
[2025-12-14 05:57:00] -rw-r--r--. 1 boincer umatlas     21262 Dec 14 05:57 stderr.txt
[2025-12-14 05:57:00] HITS file was successfully produced:
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas 142380585 Dec 14 05:52 shared/HITS.pool.root.1
[2025-12-14 05:57:00]  *** Contents of shared directory: ***
[2025-12-14 05:57:00] total 331784
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas 192558672 Dec 13 21:04 ATLAS.root_0
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 21:04 start_atlas.sh
[2025-12-14 05:57:00] -rw-r--r--. 2 boincer umatlas    592414 Dec 13 21:04 input.tar.gz
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas 142380585 Dec 14 05:52 HITS.pool.root.1
[2025-12-14 05:57:00] -rw-------. 1 boincer umatlas   4188160 Dec 14 05:57 result.tar.gz
05:57:02 (3928770): run_atlas exited; CPU time 45089.591409
05:57:02 (3928770): called boinc_finish(0)

</stderr_txt>
]]>

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