Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:11 (4175523): wrapper (7.7.26015): starting
16:28:11 (4175523): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 16:28:11] Arguments: --nthreads 12
[2025-12-13 16:28:11] Threads: 12
[2025-12-13 16:28:11] Checking for CVMFS
[2025-12-13 16:28:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:28:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:28:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:28:11] 2.11.5.0 1748072 18407 371456 153978 0 194 29190651 45568001 10178 130560 0 125205288 99.829 69837867 18777 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 16:28:11] CVMFS is ok
[2025-12-13 16:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:28:11] Further information can be found at the LHC@home message board.
[2025-12-13 16:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:28:11] Checking for apptainer binary...
[2025-12-13 16:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:28:11] Running /usr/bin/apptainer --version
[2025-12-13 16:28:11] apptainer version 1.4.1-1.el9
[2025-12-13 16:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:28:11] wns0025.triumf.lcg
[2025-12-13 16:28:11] apptainer works
[2025-12-13 16:28:11] Set ATHENA_PROC_NUMBER=12
[2025-12-13 16:28:11] Set ATHENA_CORE_NUMBER=12
[2025-12-13 16:28:11] Starting ATLAS job with PandaID=6929334851
[2025-12-13 16:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:31:30]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | found no stored workdir sizes
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | wrong length of table data, x=[1765672123.0], y=[1109.0] (must be same and length>=4)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . Timing measurements:
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . get job = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . initial setup = 2 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . payload setup = 4 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-in = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . payload execution = 14 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-out = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . log creation = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929334851/pilotlog.txt
[2025-12-13 16:31:30] 2025-12-14 00:30:58,029 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 16:31:30] - Log from pilotlog.txt -
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | found no stored workdir sizes
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | wrong length of table data, x=[1765672123.0], y=[1109.0] (must be same and length>=4)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . Timing measurements:
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . get job = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . initial setup = 2 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . payload setup = 4 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-in = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . payload execution = 14 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-out = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . log creation = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929334851/pilotlog.txt
[2025-12-13 16:31:30] 2025-12-14 00:30:58,029 | WARNING  | 
[2025-12-13 16:31:30] [begin log extracts]
[2025-12-13 16:31:30] - Log from pilotlog.txt -
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:31:30] 2025-12-14 00:30:58,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | found no stored workdir sizes
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | WARNING  | wrong length of table data, x=[1765672123.0], y=[1109.0] (must be same and length>=4)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . Timing measurements:
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . get job = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . initial setup = 2 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,018 | INFO     | . payload setup = 4 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-in = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . payload execution = 14 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . stage-out = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | . log creation = 0 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | ..............................
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 16:31:30] 2025-12-14 00:30:58,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929334851/pilotlog.txt
[2025-12-13 16:31:30] [end log extracts]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,029 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,030 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 16:31:30] 2025-12-14 00:30:58,085 | INFO     | 
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | job summary report
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | --------------------------------------------------
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | PanDA job id: 6929334851
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | task id: 47898763
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 16:28:49,314 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | pilot state: failed 
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | transexitcode: 65
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | exeerrorcode: 65
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | exitcode: 65
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | nevents: 0
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | neventsw: 0
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | pid: 4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | pgrp: 4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | corecount: 12
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | event service: False
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | sizes: {0: 2283950, 4: 2284212, 11: 2284240, 22: 2311654, 24: 2311654, 144: 2311820}
[2025-12-13 16:31:30] 2025-12-14 00:30:58,086 | INFO     | --------------------------------------------------
[2025-12-13 16:31:30] 2025-12-14 00:30:58,087 | INFO     | 
[2025-12-13 16:31:30] 2025-12-14 00:30:58,087 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | job 6929334851 has completed (purged errors)
[2025-12-13 16:31:30] 2025-12-14 00:30:58,100 | INFO     | overall cleanup function is called
[2025-12-13 16:31:30] 2025-12-14 00:30:59,106 | INFO     | --- collectZombieJob: --- 10, [4185775]
[2025-12-13 16:31:30] 2025-12-14 00:30:59,106 | INFO     | zombie collector waiting for pid 4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:59,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:31:30] 2025-12-14 00:30:59,106 | INFO     | collected zombie processes
[2025-12-13 16:31:30] 2025-12-14 00:30:59,106 | INFO     | will attempt to kill all subprocesses of pid=4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:59,312 | INFO     | process IDs to be killed: [4185775] (in reverse order)
[2025-12-13 16:31:30] 2025-12-14 00:30:59,387 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:31:30] 2025-12-14 00:30:59,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:31:30] 2025-12-14 00:30:59,396 | INFO     | did not find any defunct processes belonging to 4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:59,402 | INFO     | did not find any defunct processes belonging to 4185775
[2025-12-13 16:31:30] 2025-12-14 00:30:59,402 | INFO     | ready for new job
[2025-12-13 16:31:30] 2025-12-14 00:30:59,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:31:30] 2025-12-14 00:30:59,404 | INFO     | ***************************************
[2025-12-13 16:31:30] 2025-12-14 00:30:59,404 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:31:30] 2025-12-14 00:30:59,404 | INFO     | ***************************************
[2025-12-13 16:31:30] 2025-12-14 00:30:59,404 | INFO     | 
[2025-12-13 16:31:30] 2025-12-14 00:30:59,405 | INFO     | architecture information:
[2025-12-13 16:31:30] 2025-12-14 00:30:59,406 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:31:30] 2025-12-14 00:30:59,415 | INFO     | cat /etc/os-release:
[2025-12-13 16:31:30] NAME="CentOS Linux"
[2025-12-13 16:31:30] VERSION="7 (Core)"
[2025-12-13 16:31:30] ID="centos"
[2025-12-13 16:31:30] ID_LIKE="rhel fedora"
[2025-12-13 16:31:30] VERSION_ID="7"
[2025-12-13 16:31:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:31:30] ANSI_COLOR="0;31"
[2025-12-13 16:31:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:31:30] HOME_URL="https://www.centos.org/"
[2025-12-13 16:31:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:31:30] 
[2025-12-13 16:31:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:31:30] 
[2025-12-13 16:31:30] 2025-12-14 00:30:59,415 | INFO     | ***************************************
[2025-12-13 16:31:30] 2025-12-14 00:30:59,918 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | INFO     | sufficient remaining disk space (2202554859520 B)
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | INFO     | update_server=False
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:31:30] 2025-12-14 00:30:59,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:31:30] 2025-12-14 00:30:59,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:31:30] 2025-12-14 00:31:00,099 | INFO     | all data control threads have been joined
[2025-12-13 16:31:30] 2025-12-14 00:31:00,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:31:30] 2025-12-14 00:31:00,355 | INFO     | aborting loop
[2025-12-13 16:31:30] 2025-12-14 00:31:00,495 | INFO     | all job control threads have been joined
[2025-12-13 16:31:30] 2025-12-14 00:31:00,938 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:00,939 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,066 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,078 | INFO     | all payload control threads have been joined
[2025-12-13 16:31:30] 2025-12-14 00:31:01,105 | INFO     | [data] control thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:31:30] 2025-12-14 00:31:01,360 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,496 | INFO     | [job] control thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,872 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,935 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:01,989 | INFO     | [job] validate thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,084 | INFO     | [payload] control thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,122 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,214 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,297 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:02,521 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:05,196 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:31:30] 2025-12-14 00:31:19,739 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:31:30] 2025-12-14 00:31:21,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828226357056)>', '<ExcThread(monitor, started 139827559266048)>']
[2025-12-13 16:31:30] 2025-12-14 00:31:26,630 | INFO     | all workflow threads have been joined
[2025-12-13 16:31:30] 2025-12-14 00:31:26,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:31:30] 2025-12-14 00:31:26,630 | INFO     | traces error code: 0
[2025-12-13 16:31:30] 2025-12-14 00:31:26,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:31:30] 2025-12-14 00:31:30,255 | INFO     | PID=4179191 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 16:31:30] 2025-12-14 00:31:30,255 | INFO     | .. there are 42 such processes running
[2025-12-13 16:31:30] 2025-12-14 00:31:30,256 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:31:30] 2025-12-14 00:31:30,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:31:30] 2025-12-14 00:31:30,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:31:30] 2025-12-14 00:31:30,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:31:30] 2025-12-14 00:31:30,257 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 16:31:30] 2025-12-14 00:31:30,257 | INFO     | [monitor] control thread has ended
[2025-12-13 16:31:30] 2025-12-14 00:31:30,348 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:31:30] 2025-12-14 00:31:30,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:31:30] 2025-12-14 00:31:30,352 [wrapper] pilotpid: 4179191
[2025-12-13 16:31:30] 2025-12-14 00:31:30,354 [wrapper] Pilot exit status: 0
[2025-12-13 16:31:30] 2025-12-14 00:31:30,360 [wrapper] pandaids: 6929334851
[2025-12-13 16:31:30] 2025-12-14 00:31:30,409 [wrapper] cleanup supervisor_pilot 4179197 4179192
[2025-12-13 16:31:30] 2025-12-14 00:31:30,411 [wrapper] Test setup, not cleaning
[2025-12-13 16:31:30] 2025-12-14 00:31:30,413 [wrapper] apfmon messages muted
[2025-12-13 16:31:30] 2025-12-14 00:31:30,414 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:31:30] 2025-12-14 00:31:30,416 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:31:30]  *** Error codes and diagnostics ***
[2025-12-13 16:31:30]     "exeErrorCode": 65,
[2025-12-13 16:31:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 16:31:30]     "pilotErrorCode": 1305,
[2025-12-13 16:31:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 16:31:30]  *** Listing of results directory ***
[2025-12-13 16:31:30] total 224884
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc    579449 Dec 13 09:18 pilot3.tar.gz
[2025-12-13 16:31:30] -rwx------. 1 boinc boinc     36322 Dec 13 09:20 runpilot2-wrapper.sh
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc      5112 Dec 13 09:21 queuedata.json
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc       100 Dec 13 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:31:30] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 16:28 run_atlas
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc       105 Dec 13 16:28 job.xml
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc 226159842 Dec 13 16:28 EVNT.47898761._000291.pool.root.1
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc     15847 Dec 13 16:28 start_atlas.sh
[2025-12-13 16:31:30] drwxrwx--x. 2 boinc boinc      4096 Dec 13 16:28 shared
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc    592403 Dec 13 16:28 input.tar.gz
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc      6595 Dec 13 16:28 init_data.xml
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc         0 Dec 13 16:28 boinc_lockfile
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc      2505 Dec 13 16:28 pandaJob.out
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc    991736 Dec 13 16:28 agis_schedconf.cvmfs.json
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc   1516240 Dec 13 16:28 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:31:30] drwx------. 5 boinc boinc      4096 Dec 13 16:28 pilot3
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc       521 Dec 13 16:28 boinc_task_state.xml
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc       973 Dec 13 16:28 memory_monitor_summary.json
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc     20725 Dec 13 16:28 log.47898763._006010.job.log.tgz.1
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc      8398 Dec 13 16:30 heartbeat.json
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc      8192 Dec 13 16:31 boinc_mmap_file
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc        22 Dec 13 16:31 wrapper_checkpoint.txt
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc        95 Dec 13 16:31 pilot_heartbeat.json
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc       893 Dec 13 16:31 pilotlog.txt
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc     81992 Dec 13 16:31 log.47898763._006010.job.log.1
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc       188 Dec 13 16:31 output.list
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc       620 Dec 13 16:31 runtime_log
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc    122880 Dec 13 16:31 result.tar.gz
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc      8636 Dec 13 16:31 runtime_log.err
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc       644 Dec 13 16:31 pK4KDmSTio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxtPKDmW9VATm.diag
[2025-12-13 16:31:30] -rw-r--r--. 1 boinc boinc     21614 Dec 13 16:31 stderr.txt
[2025-12-13 16:31:30] No HITS result produced
[2025-12-13 16:31:30]  *** Contents of shared directory: ***
[2025-12-13 16:31:30] total 221580
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc 226159842 Dec 13 16:28 ATLAS.root_0
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc     15847 Dec 13 16:28 start_atlas.sh
[2025-12-13 16:31:30] -rw-r--r--. 2 boinc boinc    592403 Dec 13 16:28 input.tar.gz
[2025-12-13 16:31:30] -rw-------. 1 boinc boinc    122880 Dec 13 16:31 result.tar.gz
16:31:31 (4175523): run_atlas exited; CPU time 20.419305
16:31:31 (4175523): called boinc_finish(0)

</stderr_txt>
]]>

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