Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:10:01 (16950): wrapper (7.7.26015): starting
19:10:01 (16950): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 19:10:01] Arguments: --nthreads 8
[2025-12-13 19:10:01] Threads: 8
[2025-12-13 19:10:01] Checking for CVMFS
[2025-12-13 19:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 19:10:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 19:10:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 19:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 19:10:01] 2.11.2.0 3643 91066 131232 153977 0 59 17177292 18432000 1833 130560 0 56231939 99.980 3474139 29313 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 19:10:01] CVMFS is ok
[2025-12-13 19:10:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 19:10:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 19:10:01] Further information can be found at the LHC@home message board.
[2025-12-13 19:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 19:10:01] Checking for apptainer binary...
[2025-12-13 19:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 19:10:01] Running /usr/bin/apptainer --version
[2025-12-13 19:10:01] apptainer version 1.3.2-1.el7
[2025-12-13 19:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 19:10:02] c-206-15.aglt2.org
[2025-12-13 19:10:02] apptainer works
[2025-12-13 19:10:02] Set ATHENA_PROC_NUMBER=8
[2025-12-13 19:10:02] Set ATHENA_CORE_NUMBER=8
[2025-12-13 19:10:02] Starting ATLAS job with PandaID=6929503237
[2025-12-13 19:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 22:05:47]  *** The last 200 lines of the pilot log: ***
[2025-12-13 22:05:47] 2025-12-14 03:05:13,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:05:47] 2025-12-14 03:05:13,933 | INFO     | time since job start (10500s) is within the limit (174528.0s)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,327 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 22:05:47] 2025-12-14 03:05:14,331 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2400.2083333333335
[2025-12-13 22:05:47] 2025-12-14 03:05:14,334 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929503237/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,334 | INFO     | extracted standard info from prmon json
[2025-12-13 22:05:47] 2025-12-14 03:05:14,334 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 22:05:47] 2025-12-14 03:05:14,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 22:05:47] 2025-12-14 03:05:14,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 22:05:47] 2025-12-14 03:05:14,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 22:05:47] 2025-12-14 03:05:14,337 | INFO     | fitting pss+swap vs Time
[2025-12-13 22:05:47] 2025-12-14 03:05:14,338 | INFO     | sum of square deviations: 1577789583.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | sum of deviations: 26494523876.999992
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | mean x: 1765676254.5
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | mean y: 2478105.418604651
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | intersect: -29647072245.23938
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | chi2: 1.399776605283456
[2025-12-13 22:05:47] 2025-12-14 03:05:14,339 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,340 | INFO     | sum of deviations: 25755210526.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,340 | INFO     | mean x: 1765676102.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,340 | INFO     | mean y: 2477261.5329341316
[2025-12-13 22:05:47] 2025-12-14 03:05:14,341 | INFO     | intersect: -31486885951.66029
[2025-12-13 22:05:47] 2025-12-14 03:05:14,341 | INFO     | chi2: 1.4003495737969136
[2025-12-13 22:05:47] 2025-12-14 03:05:14,341 | INFO     | current chi2=1.4003495737969136 (change=-0.04093285394933756 %)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,341 | INFO     | right removable region: 166
[2025-12-13 22:05:47] 2025-12-14 03:05:14,341 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,342 | INFO     | sum of deviations: 1017900351.0000007
[2025-12-13 22:05:47] 2025-12-14 03:05:14,342 | INFO     | mean x: 1765676407.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,342 | INFO     | mean y: 2506829.988023952
[2025-12-13 22:05:47] 2025-12-14 03:05:14,342 | INFO     | intersect: -1242019568.7345495
[2025-12-13 22:05:47] 2025-12-14 03:05:14,343 | INFO     | chi2: 0.058056378965726164
[2025-12-13 22:05:47] 2025-12-14 03:05:14,343 | INFO     | current chi2=0.058056378965726164 (change=95.85245397397038 %)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,343 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | sum of deviations: -3828599089.5000005
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | mean x: 1765676559.5
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | mean y: 2512624.154320988
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | intersect: 5130466666.289035
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | chi2: 0.0041555372982389404
[2025-12-13 22:05:47] 2025-12-14 03:05:14,344 | INFO     | current chi2=0.0041555372982389404 (change=92.84223823071677 %)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,345 | INFO     | sum of square deviations: 1199940638.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,345 | INFO     | sum of deviations: -4090618641.9999986
[2025-12-13 22:05:47] 2025-12-14 03:05:14,345 | INFO     | mean x: 1765676712.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | mean y: 2512957.72611465
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | intersect: 6021735780.190823
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | chi2: 0.0035732177241443236
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | current chi2=0.0035732177241443236 (change=14.01309944544105 %)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | left removable region: 30
[2025-12-13 22:05:47] 2025-12-14 03:05:14,346 | INFO     | sum of square deviations: 779958810.0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,347 | INFO     | sum of deviations: -3271139945.0000005
[2025-12-13 22:05:47] 2025-12-14 03:05:14,347 | INFO     | mean x: 1765676986.5
[2025-12-13 22:05:47] 2025-12-14 03:05:14,347 | INFO     | mean y: 2512175.132352941
[2025-12-13 22:05:47] 2025-12-14 03:05:14,347 | INFO     | intersect: 7407744921.342857
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | chi2: 0.0032012223319417346
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | current memory leak: -4.19 B/s (using 136 data points, chi2=0.00)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | could have reported an average CPU frequency of 2537 MHz (9 samples)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | ..............................
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | . Timing measurements:
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | . get job = 0 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,348 | INFO     | . initial setup = 2 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | . payload setup = 5 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | . stage-in = 0 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | . payload execution = 10468 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | . stage-out = 0 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | . log creation = 0 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,349 | INFO     | ..............................
[2025-12-13 22:05:47] 2025-12-14 03:05:14,470 | INFO     | 
[2025-12-13 22:05:47] 2025-12-14 03:05:14,470 | INFO     | job summary report
[2025-12-13 22:05:47] 2025-12-14 03:05:14,470 | INFO     | --------------------------------------------------
[2025-12-13 22:05:47] 2025-12-14 03:05:14,470 | INFO     | PanDA job id: 6929503237
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | task id: 47898878
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | errors: (none)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | pilot state: finished 
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | transexitcode: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | exeerrorcode: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | exeerrordiag: 
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | exitcode: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | exitmsg: OK
[2025-12-13 22:05:47] 2025-12-14 03:05:14,471 | INFO     | cpuconsumptiontime: 79066 s
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | nevents: 400
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | neventsw: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | pid: 27942
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | pgrp: 27942
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | corecount: 8
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | event service: False
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | sizes: {0: 2283767, 1: 2283966, 4: 2284228, 11: 2284256, 10476: 2312925, 10477: 2321923, 10480: 2322107, 10486: 2322365}
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | --------------------------------------------------
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | 
[2025-12-13 22:05:47] 2025-12-14 03:05:14,472 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 22:05:47] 2025-12-14 03:05:14,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | job 6929503237 has completed (purged errors)
[2025-12-13 22:05:47] 2025-12-14 03:05:14,491 | INFO     | overall cleanup function is called
[2025-12-13 22:05:47] 2025-12-14 03:05:15,498 | INFO     | --- collectZombieJob: --- 10, [27942]
[2025-12-13 22:05:47] 2025-12-14 03:05:15,498 | INFO     | zombie collector waiting for pid 27942
[2025-12-13 22:05:47] 2025-12-14 03:05:15,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 22:05:47] 2025-12-14 03:05:15,498 | INFO     | collected zombie processes
[2025-12-13 22:05:47] 2025-12-14 03:05:15,498 | INFO     | will attempt to kill all subprocesses of pid=27942
[2025-12-13 22:05:47] 2025-12-14 03:05:15,663 | INFO     | process IDs to be killed: [27942] (in reverse order)
[2025-12-13 22:05:47] 2025-12-14 03:05:15,721 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 22:05:47] 2025-12-14 03:05:15,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 22:05:47] 2025-12-14 03:05:15,724 | INFO     | did not find any defunct processes belonging to 27942
[2025-12-13 22:05:47] 2025-12-14 03:05:15,726 | INFO     | did not find any defunct processes belonging to 27942
[2025-12-13 22:05:47] 2025-12-14 03:05:15,726 | INFO     | ready for new job
[2025-12-13 22:05:47] 2025-12-14 03:05:15,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 22:05:47] 2025-12-14 03:05:15,728 | INFO     | ***************************************
[2025-12-13 22:05:47] 2025-12-14 03:05:15,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 22:05:47] 2025-12-14 03:05:15,728 | INFO     | ***************************************
[2025-12-13 22:05:47] 2025-12-14 03:05:15,728 | INFO     | 
[2025-12-13 22:05:47] 2025-12-14 03:05:15,729 | INFO     | architecture information:
[2025-12-13 22:05:47] 2025-12-14 03:05:15,729 | INFO     | executing command: cat /etc/os-release
[2025-12-13 22:05:47] 2025-12-14 03:05:15,739 | INFO     | cat /etc/os-release:
[2025-12-13 22:05:47] NAME="CentOS Linux"
[2025-12-13 22:05:47] VERSION="7 (Core)"
[2025-12-13 22:05:47] ID="centos"
[2025-12-13 22:05:47] ID_LIKE="rhel fedora"
[2025-12-13 22:05:47] VERSION_ID="7"
[2025-12-13 22:05:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 22:05:47] ANSI_COLOR="0;31"
[2025-12-13 22:05:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 22:05:47] HOME_URL="https://www.centos.org/"
[2025-12-13 22:05:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 22:05:47] 
[2025-12-13 22:05:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 22:05:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 22:05:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 22:05:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 22:05:47] 
[2025-12-13 22:05:47] 2025-12-14 03:05:15,739 | INFO     | ***************************************
[2025-12-13 22:05:47] 2025-12-14 03:05:16,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 22:05:47] 2025-12-14 03:05:16,255 | INFO     | sufficient remaining disk space (28242345984 B)
[2025-12-13 22:05:47] 2025-12-14 03:05:16,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 22:05:47] 2025-12-14 03:05:16,256 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 22:05:47] 2025-12-14 03:05:16,256 | INFO     | update_server=False
[2025-12-13 22:05:47] 2025-12-14 03:05:16,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 22:05:47] 2025-12-14 03:05:16,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:05:47] 2025-12-14 03:05:16,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:05:47] 2025-12-14 03:05:16,689 | INFO     | aborting loop
[2025-12-13 22:05:47] 2025-12-14 03:05:16,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 22:05:47] 2025-12-14 03:05:17,196 | INFO     | all data control threads have been joined
[2025-12-13 22:05:47] 2025-12-14 03:05:17,262 | INFO     | [job] retrieve thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:17,262 | INFO     | [job] queue monitor thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:17,303 | INFO     | [job] validate thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:17,375 | INFO     | all job control threads have been joined
[2025-12-13 22:05:47] 2025-12-14 03:05:17,396 | INFO     | all payload control threads have been joined
[2025-12-13 22:05:47] 2025-12-14 03:05:17,416 | INFO     | [payload] validate_post thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:17,696 | INFO     | [job] job monitor thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:17,852 | INFO     | [payload] failed_post thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,113 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,201 | INFO     | [data] control thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,380 | INFO     | [job] control thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,401 | INFO     | [payload] control thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,608 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,609 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,741 | INFO     | [data] copytool_in thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:18,774 | INFO     | [data] copytool_out thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:19,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 22:05:47] 2025-12-14 03:05:23,414 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 22:05:47] 2025-12-14 03:05:30,312 | INFO     | [monitor] cgroup control has ended
[2025-12-13 22:05:47] 2025-12-14 03:05:30,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316254332736)>', '<ExcThread(monitor, started 140315298096896)>']
[2025-12-13 22:05:47] 2025-12-14 03:05:35,747 | INFO     | all workflow threads have been joined
[2025-12-13 22:05:47] 2025-12-14 03:05:35,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 22:05:47] 2025-12-14 03:05:35,747 | INFO     | traces error code: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:35,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 22:05:47] 2025-12-14 03:05:47,170 | INFO     | PID=21515 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 22:05:47] 2025-12-14 03:05:47,171 | INFO     | .. there are 3 such processes running
[2025-12-13 22:05:47] 2025-12-14 03:05:47,171 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 22:05:47] 2025-12-14 03:05:47,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 22:05:47] 2025-12-14 03:05:47,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 22:05:47] 2025-12-14 03:05:47,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 22:05:47] 2025-12-14 03:05:47,172 | INFO     | [monitor] control thread has ended
[2025-12-13 22:05:47] 2025-12-14 03:05:47,282 [wrapper] ==== pilot stdout END ====
[2025-12-13 22:05:47] 2025-12-14 03:05:47,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 22:05:47] 2025-12-14 03:05:47,287 [wrapper] pilotpid: 21515
[2025-12-13 22:05:47] 2025-12-14 03:05:47,290 [wrapper] Pilot exit status: 0
[2025-12-13 22:05:47] 2025-12-14 03:05:47,300 [wrapper] pandaids: 6929503237
[2025-12-13 22:05:47] 2025-12-14 03:05:47,340 [wrapper] cleanup supervisor_pilot 14871 21516
[2025-12-13 22:05:47] 2025-12-14 03:05:47,344 [wrapper] Test setup, not cleaning
[2025-12-13 22:05:47] 2025-12-14 03:05:47,346 [wrapper] apfmon messages muted
[2025-12-13 22:05:47] 2025-12-14 03:05:47,349 [wrapper] ==== wrapper stdout END ====
[2025-12-13 22:05:47] 2025-12-14 03:05:47,351 [wrapper] ==== wrapper stderr END ====
[2025-12-13 22:05:47]  *** Error codes and diagnostics ***
[2025-12-13 22:05:47]     "exeErrorCode": 0,
[2025-12-13 22:05:47]     "exeErrorDiag": "",
[2025-12-13 22:05:47]     "pilotErrorCode": 0,
[2025-12-13 22:05:47]     "pilotErrorDiag": "",
[2025-12-13 22:05:47]  *** Listing of results directory ***
[2025-12-13 22:05:47] total 374508
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:19 queuedata.json
[2025-12-13 22:05:47] -rwx------ 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas       100 Dec 13 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 22:05:47] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 19:10 run_atlas
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas       105 Dec 13 19:10 job.xml
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas 195757582 Dec 13 19:10 EVNT.47898875._000024.pool.root.1
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 19:10 start_atlas.sh
[2025-12-13 22:05:47] drwxrwx--x 2 boincer umatlas      4096 Dec 13 19:10 shared
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 19:10 input.tar.gz
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas         0 Dec 13 19:10 boinc_lockfile
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas      2497 Dec 13 19:10 pandaJob.out
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas        57 Dec 13 19:10 setup.sh.local
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas    991736 Dec 13 19:10 agis_schedconf.cvmfs.json
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas   1516240 Dec 13 19:10 agis_ddmendpoints.agis.ALL.json
[2025-12-13 22:05:47] drwx------ 5 boincer umatlas      4096 Dec 13 19:10 pilot3
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 22:00 init_data.xml
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas 180050359 Dec 13 22:04 HITS.47898878._000590.pool.root.1
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas       531 Dec 13 22:04 boinc_task_state.xml
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas      1053 Dec 13 22:05 memory_monitor_summary.json
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas    413106 Dec 13 22:05 log.47898878._000590.job.log.tgz.1
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas      7852 Dec 13 22:05 heartbeat.json
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 22:05 boinc_mmap_file
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas        28 Dec 13 22:05 wrapper_checkpoint.txt
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas        95 Dec 13 22:05 pilot_heartbeat.json
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas       820 Dec 13 22:05 pilotlog.txt
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas   1476894 Dec 13 22:05 log.47898878._000590.job.log.1
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas       357 Dec 13 22:05 output.list
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas       620 Dec 13 22:05 runtime_log
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas   1904640 Dec 13 22:05 result.tar.gz
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas       661 Dec 13 22:05 XRYMDm0Sio8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoyTKDmdVL3nm.diag
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 22:05 runtime_log.err
[2025-12-13 22:05:47] -rw-r--r-- 1 boincer umatlas     21115 Dec 13 22:05 stderr.txt
[2025-12-13 22:05:47] HITS file was successfully produced:
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas 180050359 Dec 13 22:04 shared/HITS.pool.root.1
[2025-12-13 22:05:47]  *** Contents of shared directory: ***
[2025-12-13 22:05:47] total 369464
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas 195757582 Dec 13 19:10 ATLAS.root_0
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 19:10 start_atlas.sh
[2025-12-13 22:05:47] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 19:10 input.tar.gz
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas 180050359 Dec 13 22:04 HITS.pool.root.1
[2025-12-13 22:05:47] -rw------- 1 boincer umatlas   1904640 Dec 13 22:05 result.tar.gz
22:05:48 (16950): run_atlas exited; CPU time 79180.910916
22:05:48 (16950): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN