Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:21 (25667): wrapper (7.7.26015): starting
19:00:21 (25667): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 19:00:21] Arguments: --nthreads 8
[2025-12-13 19:00:21] Threads: 8
[2025-12-13 19:00:21] Checking for CVMFS
[2025-12-13 19:00:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 19:00:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 19:00:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 19:00:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 19:00:21] 2.11.2.0 8814 142834 134080 153977 3 188 16313938 18432001 1833 130560 0 102231761 99.976 5833517 32447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 19:00:21] CVMFS is ok
[2025-12-13 19:00:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 19:00:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 19:00:21] Further information can be found at the LHC@home message board.
[2025-12-13 19:00:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 19:00:21] Checking for apptainer binary...
[2025-12-13 19:00:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 19:00:21] Running /usr/bin/apptainer --version
[2025-12-13 19:00:21] apptainer version 1.3.2-1.el7
[2025-12-13 19:00:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 19:00:22] c-206-19.aglt2.org
[2025-12-13 19:00:22] apptainer works
[2025-12-13 19:00:22] Set ATHENA_PROC_NUMBER=8
[2025-12-13 19:00:22] Set ATHENA_CORE_NUMBER=8
[2025-12-13 19:00:22] Starting ATLAS job with PandaID=6929343645
[2025-12-13 19:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 22:18:10]  *** The last 200 lines of the pilot log: ***
[2025-12-13 22:18:10] 2025-12-14 03:17:37,199 | INFO     | time since job start (11823s) is within the limit (174528.0s)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,363 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 22:18:10] 2025-12-14 03:17:37,367 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2494.5833333333335
[2025-12-13 22:18:10] 2025-12-14 03:17:37,369 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929343645/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,370 | INFO     | extracted standard info from prmon json
[2025-12-13 22:18:10] 2025-12-14 03:17:37,370 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 22:18:10] 2025-12-14 03:17:37,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 22:18:10] 2025-12-14 03:17:37,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 22:18:10] 2025-12-14 03:17:37,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 22:18:10] 2025-12-14 03:17:37,375 | INFO     | fitting pss+swap vs Time
[2025-12-13 22:18:10] 2025-12-14 03:17:37,375 | INFO     | sum of square deviations: 2263977332.5
[2025-12-13 22:18:10] 2025-12-14 03:17:37,376 | INFO     | sum of deviations: 18463209038.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,376 | INFO     | mean x: 1765676346.5
[2025-12-13 22:18:10] 2025-12-14 03:17:37,376 | INFO     | mean y: 2438191.505154639
[2025-12-13 22:18:10] 2025-12-14 03:17:37,377 | INFO     | intersect: -14397022002.242884
[2025-12-13 22:18:10] 2025-12-14 03:17:37,377 | INFO     | chi2: 2.209278407918431
[2025-12-13 22:18:10] 2025-12-14 03:17:37,377 | INFO     | sum of square deviations: 2093397390.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,378 | INFO     | sum of deviations: 30330217968.000008
[2025-12-13 22:18:10] 2025-12-14 03:17:37,378 | INFO     | mean x: 1765676194.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,378 | INFO     | mean y: 2448563.08994709
[2025-12-13 22:18:10] 2025-12-14 03:17:37,378 | INFO     | intersect: -25579576178.48512
[2025-12-13 22:18:10] 2025-12-14 03:17:37,379 | INFO     | chi2: 1.4356567129259117
[2025-12-13 22:18:10] 2025-12-14 03:17:37,379 | INFO     | current chi2=1.4356567129259117 (change=35.01694002076547 %)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,379 | INFO     | sum of square deviations: 1931608310.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,380 | INFO     | sum of deviations: 29246051090.5
[2025-12-13 22:18:10] 2025-12-14 03:17:37,380 | INFO     | mean x: 1765676041.5
[2025-12-13 22:18:10] 2025-12-14 03:17:37,380 | INFO     | mean y: 2447540.8532608696
[2025-12-13 22:18:10] 2025-12-14 03:17:37,380 | INFO     | intersect: -26731260039.32421
[2025-12-13 22:18:10] 2025-12-14 03:17:37,381 | INFO     | chi2: 1.4365958586635206
[2025-12-13 22:18:10] 2025-12-14 03:17:37,381 | INFO     | current chi2=1.4365958586635206 (change=-0.06541575915421212 %)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,381 | INFO     | right removable region: 183
[2025-12-13 22:18:10] 2025-12-14 03:17:37,381 | INFO     | sum of square deviations: 2093397390.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,382 | INFO     | sum of deviations: -10873682856.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,382 | INFO     | mean x: 1765676499.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,382 | INFO     | mean y: 2464131.328042328
[2025-12-13 22:18:10] 2025-12-14 03:17:37,382 | INFO     | intersect: 9173874379.63183
[2025-12-13 22:18:10] 2025-12-14 03:17:37,383 | INFO     | chi2: 0.8161968437775996
[2025-12-13 22:18:10] 2025-12-14 03:17:37,383 | INFO     | current chi2=0.8161968437775996 (change=63.05595343474092 %)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,383 | INFO     | sum of square deviations: 1931608310.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,384 | INFO     | sum of deviations: -10231765216.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,384 | INFO     | mean x: 1765676651.5
[2025-12-13 22:18:10] 2025-12-14 03:17:37,384 | INFO     | mean y: 2463489.0217391304
[2025-12-13 22:18:10] 2025-12-14 03:17:37,384 | INFO     | intersect: 9355285617.60383
[2025-12-13 22:18:10] 2025-12-14 03:17:37,384 | INFO     | chi2: 0.8056285401808294
[2025-12-13 22:18:10] 2025-12-14 03:17:37,385 | INFO     | current chi2=0.8056285401808294 (change=1.2948228944205378 %)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,385 | INFO     | left removable region: 20
[2025-12-13 22:18:10] 2025-12-14 03:17:37,385 | INFO     | sum of square deviations: 1342841922.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | sum of deviations: 3297181211.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | mean x: 1765676621.0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | mean y: 2472656.8527607364
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | intersect: -4332926532.049809
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | chi2: 0.00012206051323679197
[2025-12-13 22:18:10] 2025-12-14 03:17:37,386 | INFO     | current memory leak: 2.46 B/s (using 163 data points, chi2=0.00)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | could have reported an average CPU frequency of 2583 MHz (10 samples)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | ..............................
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . Timing measurements:
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . get job = 0 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . initial setup = 2 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . payload setup = 5 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . stage-in = 0 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . payload execution = 11790 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,387 | INFO     | . stage-out = 1 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,388 | INFO     | . log creation = 0 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,388 | INFO     | ..............................
[2025-12-13 22:18:10] 2025-12-14 03:17:37,518 | INFO     | 
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | job summary report
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | --------------------------------------------------
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | PanDA job id: 6929343645
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | task id: 47886831
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | errors: (none)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | pilot state: finished 
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | transexitcode: 0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | exeerrorcode: 0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | exeerrordiag: 
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | exitcode: 0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,520 | INFO     | exitmsg: OK
[2025-12-13 22:18:10] 2025-12-14 03:17:37,521 | INFO     | cpuconsumptiontime: 90224 s
[2025-12-13 22:18:10] 2025-12-14 03:17:37,521 | INFO     | nevents: 400
[2025-12-13 22:18:10] 2025-12-14 03:17:37,521 | INFO     | neventsw: 0
[2025-12-13 22:18:10] 2025-12-14 03:17:37,521 | INFO     | pid: 3700
[2025-12-13 22:18:10] 2025-12-14 03:17:37,521 | INFO     | pgrp: 3700
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | corecount: 8
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | event service: False
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | sizes: {0: 2283760, 1: 2284015, 2: 2284015, 4: 2284305, 12: 2284333, 11798: 2313672, 11799: 2313799, 11802: 2322853, 11803: 2322909, 11808: 2323103}
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | --------------------------------------------------
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | 
[2025-12-13 22:18:10] 2025-12-14 03:17:37,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 22:18:10] 2025-12-14 03:17:37,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 22:18:10] 2025-12-14 03:17:37,544 | INFO     | job 6929343645 has completed (purged errors)
[2025-12-13 22:18:10] 2025-12-14 03:17:37,545 | INFO     | overall cleanup function is called
[2025-12-13 22:18:10] 2025-12-14 03:17:38,552 | INFO     | --- collectZombieJob: --- 10, [3700]
[2025-12-13 22:18:10] 2025-12-14 03:17:38,553 | INFO     | zombie collector waiting for pid 3700
[2025-12-13 22:18:10] 2025-12-14 03:17:38,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 22:18:10] 2025-12-14 03:17:38,553 | INFO     | collected zombie processes
[2025-12-13 22:18:10] 2025-12-14 03:17:38,553 | INFO     | will attempt to kill all subprocesses of pid=3700
[2025-12-13 22:18:10] 2025-12-14 03:17:38,712 | INFO     | process IDs to be killed: [3700] (in reverse order)
[2025-12-13 22:18:10] 2025-12-14 03:17:38,768 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 22:18:10] 2025-12-14 03:17:38,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 22:18:10] 2025-12-14 03:17:38,774 | INFO     | did not find any defunct processes belonging to 3700
[2025-12-13 22:18:10] 2025-12-14 03:17:38,778 | INFO     | did not find any defunct processes belonging to 3700
[2025-12-13 22:18:10] 2025-12-14 03:17:38,779 | INFO     | ready for new job
[2025-12-13 22:18:10] 2025-12-14 03:17:38,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 22:18:10] 2025-12-14 03:17:38,781 | INFO     | ***************************************
[2025-12-13 22:18:10] 2025-12-14 03:17:38,781 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 22:18:10] 2025-12-14 03:17:38,781 | INFO     | ***************************************
[2025-12-13 22:18:10] 2025-12-14 03:17:38,782 | INFO     | 
[2025-12-13 22:18:10] 2025-12-14 03:17:38,783 | INFO     | architecture information:
[2025-12-13 22:18:10] 2025-12-14 03:17:38,783 | INFO     | executing command: cat /etc/os-release
[2025-12-13 22:18:10] 2025-12-14 03:17:38,797 | INFO     | cat /etc/os-release:
[2025-12-13 22:18:10] NAME="CentOS Linux"
[2025-12-13 22:18:10] VERSION="7 (Core)"
[2025-12-13 22:18:10] ID="centos"
[2025-12-13 22:18:10] ID_LIKE="rhel fedora"
[2025-12-13 22:18:10] VERSION_ID="7"
[2025-12-13 22:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 22:18:10] ANSI_COLOR="0;31"
[2025-12-13 22:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 22:18:10] HOME_URL="https://www.centos.org/"
[2025-12-13 22:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 22:18:10] 
[2025-12-13 22:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 22:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 22:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 22:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 22:18:10] 
[2025-12-13 22:18:10] 2025-12-14 03:17:38,798 | INFO     | ***************************************
[2025-12-13 22:18:10] 2025-12-14 03:17:39,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 22:18:10] 2025-12-14 03:17:39,316 | INFO     | sufficient remaining disk space (28119662592 B)
[2025-12-13 22:18:10] 2025-12-14 03:17:39,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 22:18:10] 2025-12-14 03:17:39,316 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 22:18:10] 2025-12-14 03:17:39,316 | INFO     | update_server=False
[2025-12-13 22:18:10] 2025-12-14 03:17:39,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 22:18:10] 2025-12-14 03:17:39,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:18:10] 2025-12-14 03:17:39,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:18:10] 2025-12-14 03:17:39,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 22:18:10] 2025-12-14 03:17:39,317 | INFO     | aborting loop
[2025-12-13 22:18:10] 2025-12-14 03:17:39,478 | INFO     | all payload control threads have been joined
[2025-12-13 22:18:10] 2025-12-14 03:17:39,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 22:18:10] 2025-12-14 03:17:40,129 | INFO     | all data control threads have been joined
[2025-12-13 22:18:10] 2025-12-14 03:17:40,181 | INFO     | all job control threads have been joined
[2025-12-13 22:18:10] 2025-12-14 03:17:40,318 | INFO     | [job] retrieve thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:40,319 | INFO     | [job] queue monitor thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:40,323 | INFO     | [job] job monitor thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:40,484 | INFO     | [payload] control thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,052 | INFO     | [payload] validate_post thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,134 | INFO     | [data] control thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,186 | INFO     | [job] control thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,191 | INFO     | [job] validate thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,443 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,509 | INFO     | [data] copytool_out thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,708 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,718 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,718 | INFO     | [data] copytool_in thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:41,865 | INFO     | [payload] failed_post thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:43,325 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:50,088 | INFO     | job.realtimelogging is not enabled
[2025-12-13 22:18:10] 2025-12-14 03:17:51,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 22:18:10] 2025-12-14 03:17:52,809 | INFO     | [monitor] cgroup control has ended
[2025-12-13 22:18:10] 2025-12-14 03:17:52,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572184676160)>', '<ExcThread(monitor, started 140571880429312)>']
[2025-12-13 22:18:10] 2025-12-14 03:17:57,869 | INFO     | all workflow threads have been joined
[2025-12-13 22:18:10] 2025-12-14 03:17:57,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 22:18:10] 2025-12-14 03:17:57,869 | INFO     | traces error code: 0
[2025-12-13 22:18:10] 2025-12-14 03:17:57,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 22:18:10] 2025-12-14 03:18:10,466 | INFO     | PID=29668 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 22:18:10] 2025-12-14 03:18:10,466 | INFO     | .. there are 3 such processes running
[2025-12-13 22:18:10] 2025-12-14 03:18:10,467 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 22:18:10] 2025-12-14 03:18:10,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 22:18:10] 2025-12-14 03:18:10,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 22:18:10] 2025-12-14 03:18:10,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 22:18:10] 2025-12-14 03:18:10,468 | INFO     | [monitor] control thread has ended
[2025-12-13 22:18:10] 2025-12-14 03:18:10,576 [wrapper] ==== pilot stdout END ====
[2025-12-13 22:18:10] 2025-12-14 03:18:10,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 22:18:10] 2025-12-14 03:18:10,585 [wrapper] pilotpid: 29668
[2025-12-13 22:18:10] 2025-12-14 03:18:10,587 [wrapper] Pilot exit status: 0
[2025-12-13 22:18:10] 2025-12-14 03:18:10,596 [wrapper] pandaids: 6929343645
[2025-12-13 22:18:10] 2025-12-14 03:18:10,624 [wrapper] cleanup supervisor_pilot 16192 29669
[2025-12-13 22:18:10] 2025-12-14 03:18:10,627 [wrapper] Test setup, not cleaning
[2025-12-13 22:18:10] 2025-12-14 03:18:10,629 [wrapper] apfmon messages muted
[2025-12-13 22:18:10] 2025-12-14 03:18:10,631 [wrapper] ==== wrapper stdout END ====
[2025-12-13 22:18:10] 2025-12-14 03:18:10,634 [wrapper] ==== wrapper stderr END ====
[2025-12-13 22:18:10]  *** Error codes and diagnostics ***
[2025-12-13 22:18:10]     "exeErrorCode": 0,
[2025-12-13 22:18:10]     "exeErrorDiag": "",
[2025-12-13 22:18:10]     "pilotErrorCode": 0,
[2025-12-13 22:18:10]     "pilotErrorDiag": "",
[2025-12-13 22:18:10]  *** Listing of results directory ***
[2025-12-13 22:18:10] total 336492
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas    597923 Dec  8 02:17 pilot3.tar.gz
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:19 queuedata.json
[2025-12-13 22:18:10] -rwx------ 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas       100 Dec 13 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 22:18:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 19:00 run_atlas
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas       105 Dec 13 19:00 job.xml
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas 190808873 Dec 13 19:00 EVNT.47886829._000231.pool.root.1
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas    610554 Dec 13 19:00 input.tar.gz
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 19:00 start_atlas.sh
[2025-12-13 22:18:10] drwxrwx--x 2 boincer umatlas      4096 Dec 13 19:00 shared
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas         0 Dec 13 19:00 boinc_lockfile
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas      2536 Dec 13 19:00 pandaJob.out
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas        57 Dec 13 19:00 setup.sh.local
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas    991736 Dec 13 19:00 agis_schedconf.cvmfs.json
[2025-12-13 22:18:10] drwx------ 7 boincer umatlas      4096 Dec 13 19:00 pilot3
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 22:09 init_data.xml
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas 145665994 Dec 13 22:17 HITS.47886831._005769.pool.root.1
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas       530 Dec 13 22:17 boinc_task_state.xml
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas      1051 Dec 13 22:17 memory_monitor_summary.json
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas   1516240 Dec 13 22:17 agis_ddmendpoints.agis.ALL.json
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas    417408 Dec 13 22:17 log.47886831._005769.job.log.tgz.1
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas      7847 Dec 13 22:17 heartbeat.json
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 22:17 boinc_mmap_file
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas        28 Dec 13 22:17 wrapper_checkpoint.txt
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas        95 Dec 13 22:18 pilot_heartbeat.json
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas       820 Dec 13 22:18 pilotlog.txt
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas   1656467 Dec 13 22:18 log.47886831._005769.job.log.1
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas       357 Dec 13 22:18 output.list
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas       620 Dec 13 22:18 runtime_log
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas   2088960 Dec 13 22:18 result.tar.gz
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas       662 Dec 13 22:18 SLqKDm1Sio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSrPKDmt1tCRm.diag
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 22:18 runtime_log.err
[2025-12-13 22:18:10] -rw-r--r-- 1 boincer umatlas     21059 Dec 13 22:18 stderr.txt
[2025-12-13 22:18:10] HITS file was successfully produced:
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas 145665994 Dec 13 22:17 shared/HITS.pool.root.1
[2025-12-13 22:18:10]  *** Contents of shared directory: ***
[2025-12-13 22:18:10] total 331252
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas 190808873 Dec 13 19:00 ATLAS.root_0
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas    610554 Dec 13 19:00 input.tar.gz
[2025-12-13 22:18:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 19:00 start_atlas.sh
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas 145665994 Dec 13 22:17 HITS.pool.root.1
[2025-12-13 22:18:10] -rw------- 1 boincer umatlas   2088960 Dec 13 22:18 result.tar.gz
22:18:12 (25667): run_atlas exited; CPU time 90362.171365
22:18:12 (25667): called boinc_finish(0)

</stderr_txt>
]]>

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