Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:36:55 (3481484): wrapper (7.7.26015): starting
21:36:55 (3481484): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 21:36:55] Arguments: --nthreads 9
[2025-12-13 21:36:55] Threads: 9
[2025-12-13 21:36:55] Checking for CVMFS
[2025-12-13 21:36:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 21:36:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 21:36:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 21:36:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 21:36:59] 2.13.3.0 12022 55243 357504 153980 3 108 16656921 32935937 40174 16776704 0 114991059 99.519 137221232 12162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 21:36:59] CVMFS is ok
[2025-12-13 21:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 21:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 21:37:00] Further information can be found at the LHC@home message board.
[2025-12-13 21:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 21:37:00] Checking for apptainer binary...
[2025-12-13 21:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 21:37:00] Running /usr/bin/apptainer --version
[2025-12-13 21:37:00] apptainer version 1.4.5-2.el9
[2025-12-13 21:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 21:37:02] c6-12-25-4.aglt2.org
[2025-12-13 21:37:02] apptainer works
[2025-12-13 21:37:02] Set ATHENA_PROC_NUMBER=9
[2025-12-13 21:37:02] Set ATHENA_CORE_NUMBER=9
[2025-12-13 21:37:03] Starting ATLAS job with PandaID=6929503345
[2025-12-13 21:37:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 07:50:12]  *** The last 200 lines of the pilot log: ***
[2025-12-14 07:50:12] 2025-12-14 12:49:07,377 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 07:50:12] 2025-12-14 12:49:07,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 07:50:12] 2025-12-14 12:49:07,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 07:50:12] 2025-12-14 12:49:07,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 07:50:12] 2025-12-14 12:49:07,548 | INFO     | fitting pss+swap vs Time
[2025-12-14 07:50:12] 2025-12-14 12:49:07,550 | INFO     | sum of square deviations: 65656471385.19443
[2025-12-14 07:50:12] 2025-12-14 12:49:07,637 | INFO     | sum of deviations: 196372852834.97293
[2025-12-14 07:50:12] 2025-12-14 12:49:07,637 | INFO     | mean x: 1765698262.3087249
[2025-12-14 07:50:12] 2025-12-14 12:49:07,659 | INFO     | mean y: 2523925.5436241613
[2025-12-14 07:50:12] 2025-12-14 12:49:07,660 | INFO     | intersect: -5278527548.896528
[2025-12-14 07:50:12] 2025-12-14 12:49:07,667 | INFO     | chi2: 4.426847356718117
[2025-12-14 07:50:12] 2025-12-14 12:49:07,669 | INFO     | sum of square deviations: 64018243726.896675
[2025-12-14 07:50:12] 2025-12-14 12:49:07,879 | INFO     | sum of deviations: 269988034845.60553
[2025-12-14 07:50:12] 2025-12-14 12:49:07,879 | INFO     | mean x: 1765698109.8155668
[2025-12-14 07:50:12] 2025-12-14 12:49:07,880 | INFO     | mean y: 2530741.803722504
[2025-12-14 07:50:12] 2025-12-14 12:49:07,880 | INFO     | intersect: -7444055341.272728
[2025-12-14 07:50:12] 2025-12-14 12:49:07,882 | INFO     | chi2: 3.0338850277852196
[2025-12-14 07:50:12] 2025-12-14 12:49:07,882 | INFO     | current chi2=3.0338850277852196 (change=31.466238085190774 %)
[2025-12-14 07:50:12] 2025-12-14 12:49:07,977 | INFO     | sum of square deviations: 62407289015.85157
[2025-12-14 07:50:12] 2025-12-14 12:49:07,988 | INFO     | monitor loop #1259: job 0:6929503345 is in state 'finished'
[2025-12-14 07:50:12] 2025-12-14 12:49:07,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,030 | INFO     | sum of deviations: 267113604576.39764
[2025-12-14 07:50:12] 2025-12-14 12:49:08,032 | INFO     | mean x: 1765697957.3122866
[2025-12-14 07:50:12] 2025-12-14 12:49:08,032 | INFO     | mean y: 2530469.6808873722
[2025-12-14 07:50:12] 2025-12-14 12:49:08,032 | INFO     | intersect: -7554951250.94103
[2025-12-14 07:50:12] 2025-12-14 12:49:08,034 | INFO     | chi2: 3.0340099124006397
[2025-12-14 07:50:12] 2025-12-14 12:49:08,035 | INFO     | current chi2=3.0340099124006397 (change=-0.004116326567299342 %)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,035 | INFO     | right removable region: 585
[2025-12-14 07:50:12] 2025-12-14 12:49:08,049 | INFO     | sum of square deviations: 64017585870.41632
[2025-12-14 07:50:12] 2025-12-14 12:49:08,418 | INFO     | sum of deviations: 36455959293.67014
[2025-12-14 07:50:12] 2025-12-14 12:49:08,419 | INFO     | mean x: 1765698414.8324873
[2025-12-14 07:50:12] 2025-12-14 12:49:08,419 | INFO     | mean y: 2538789.6734348563
[2025-12-14 07:50:12] 2025-12-14 12:49:08,420 | INFO     | intersect: -1002969753.9684412
[2025-12-14 07:50:12] 2025-12-14 12:49:08,426 | INFO     | chi2: 1.798626179340637
[2025-12-14 07:50:12] 2025-12-14 12:49:08,427 | INFO     | current chi2=1.798626179340637 (change=59.37004295819983 %)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,429 | INFO     | sum of square deviations: 62406260863.87882
[2025-12-14 07:50:12] 2025-12-14 12:49:08,665 | INFO     | sum of deviations: -16755255701.866783
[2025-12-14 07:50:12] 2025-12-14 12:49:08,666 | INFO     | mean x: 1765698567.3532424
[2025-12-14 07:50:12] 2025-12-14 12:49:08,666 | INFO     | mean y: 2543818.2457337882
[2025-12-14 07:50:12] 2025-12-14 12:49:08,671 | INFO     | intersect: 476610531.72747797
[2025-12-14 07:50:12] 2025-12-14 12:49:08,673 | INFO     | chi2: 1.4959564692795793
[2025-12-14 07:50:12] 2025-12-14 12:49:08,675 | INFO     | current chi2=1.4959564692795793 (change=16.827827457288222 %)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,675 | INFO     | left removable region: 20
[2025-12-14 07:50:12] 2025-12-14 12:49:08,677 | INFO     | sum of square deviations: 55934939975.24971
[2025-12-14 07:50:12] 2025-12-14 12:49:08,778 | INFO     | sum of deviations: 34890506140.552185
[2025-12-14 07:50:12] 2025-12-14 12:49:08,779 | INFO     | mean x: 1765698536.899115
[2025-12-14 07:50:12] 2025-12-14 12:49:08,779 | INFO     | mean y: 2552925.9044247787
[2025-12-14 07:50:12] 2025-12-14 12:49:08,779 | INFO     | intersect: -1098835860.2693384
[2025-12-14 07:50:12] 2025-12-14 12:49:08,785 | INFO     | chi2: 0.038689346064687186
[2025-12-14 07:50:12] 2025-12-14 12:49:08,786 | INFO     | current memory leak: 0.62 B/s (using 565 data points, chi2=0.04)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,788 | INFO     | could have reported an average CPU frequency of 999 MHz (23 samples)
[2025-12-14 07:50:12] 2025-12-14 12:49:08,788 | INFO     | ..............................
[2025-12-14 07:50:12] 2025-12-14 12:49:08,788 | INFO     | . Timing measurements:
[2025-12-14 07:50:12] 2025-12-14 12:49:08,793 | INFO     | . get job = 0 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,793 | INFO     | . initial setup = 8 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,793 | INFO     | . payload setup = 46 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,793 | INFO     | . stage-in = 1 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,794 | INFO     | . payload execution = 36394 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,794 | INFO     | . stage-out = 10 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,794 | INFO     | . log creation = 1 s
[2025-12-14 07:50:12] 2025-12-14 12:49:08,794 | INFO     | ..............................
[2025-12-14 07:50:12] 2025-12-14 12:49:11,366 | INFO     | 
[2025-12-14 07:50:12] 2025-12-14 12:49:11,366 | INFO     | job summary report
[2025-12-14 07:50:12] 2025-12-14 12:49:11,367 | INFO     | --------------------------------------------------
[2025-12-14 07:50:12] 2025-12-14 12:49:11,367 | INFO     | PanDA job id: 6929503345
[2025-12-14 07:50:12] 2025-12-14 12:49:11,367 | INFO     | task id: 47898878
[2025-12-14 07:50:12] 2025-12-14 12:49:11,367 | INFO     | errors: (none)
[2025-12-14 07:50:12] 2025-12-14 12:49:11,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 07:50:12] 2025-12-14 12:49:11,368 | INFO     | pilot state: finished 
[2025-12-14 07:50:12] 2025-12-14 12:49:11,368 | INFO     | transexitcode: 0
[2025-12-14 07:50:12] 2025-12-14 12:49:11,368 | INFO     | exeerrorcode: 0
[2025-12-14 07:50:12] 2025-12-14 12:49:11,368 | INFO     | exeerrordiag: 
[2025-12-14 07:50:12] 2025-12-14 12:49:11,368 | INFO     | exitcode: 0
[2025-12-14 07:50:12] 2025-12-14 12:49:11,369 | INFO     | exitmsg: OK
[2025-12-14 07:50:12] 2025-12-14 12:49:11,369 | INFO     | cpuconsumptiontime: 108366 s
[2025-12-14 07:50:12] 2025-12-14 12:49:11,369 | INFO     | nevents: 400
[2025-12-14 07:50:12] 2025-12-14 12:49:11,369 | INFO     | neventsw: 0
[2025-12-14 07:50:12] 2025-12-14 12:49:11,468 | INFO     | pid: 3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:11,469 | INFO     | pgrp: 3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:11,469 | INFO     | corecount: 9
[2025-12-14 07:50:12] 2025-12-14 12:49:11,469 | INFO     | event service: False
[2025-12-14 07:50:12] 2025-12-14 12:49:11,469 | INFO     | sizes: {0: 2283110, 1: 2283711, 2: 2283795, 3: 2283851, 4: 2284022, 5: 2284050, 16: 2284234, 28: 2284262, 39: 2284290, 46: 2284580, 53: 2284608, 36449: 2323330, 36
[2025-12-14 07:50:12] 2025-12-14 12:49:11,512 | INFO     | --------------------------------------------------
[2025-12-14 07:50:12] 2025-12-14 12:49:11,512 | INFO     | 
[2025-12-14 07:50:12] 2025-12-14 12:49:11,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-14 07:50:12] 2025-12-14 12:49:11,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 07:50:12] 2025-12-14 12:49:11,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 07:50:12] 2025-12-14 12:49:11,773 | INFO     | job 6929503345 has completed (purged errors)
[2025-12-14 07:50:12] 2025-12-14 12:49:11,773 | INFO     | overall cleanup function is called
[2025-12-14 07:50:12] 2025-12-14 12:49:12,715 | INFO     | PID=3488448 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 07:50:12] 2025-12-14 12:49:12,716 | INFO     | .. there are 53 such processes running
[2025-12-14 07:50:12] 2025-12-14 12:49:12,809 | INFO     | --- collectZombieJob: --- 10, [3502077]
[2025-12-14 07:50:12] 2025-12-14 12:49:12,809 | INFO     | zombie collector waiting for pid 3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:12,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 07:50:12] 2025-12-14 12:49:12,810 | INFO     | collected zombie processes
[2025-12-14 07:50:12] 2025-12-14 12:49:12,810 | INFO     | will attempt to kill all subprocesses of pid=3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:16,499 | INFO     | process IDs to be killed: [3502077] (in reverse order)
[2025-12-14 07:50:12] 2025-12-14 12:49:18,867 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 07:50:12] 2025-12-14 12:49:18,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 07:50:12] 2025-12-14 12:49:19,178 | INFO     | did not find any defunct processes belonging to 3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:19,491 | INFO     | did not find any defunct processes belonging to 3502077
[2025-12-14 07:50:12] 2025-12-14 12:49:19,492 | INFO     | ready for new job
[2025-12-14 07:50:12] 2025-12-14 12:49:19,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 07:50:12] 2025-12-14 12:49:19,542 | INFO     | ***************************************
[2025-12-14 07:50:12] 2025-12-14 12:49:19,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 07:50:12] 2025-12-14 12:49:19,543 | INFO     | ***************************************
[2025-12-14 07:50:12] 2025-12-14 12:49:19,543 | INFO     | 
[2025-12-14 07:50:12] 2025-12-14 12:49:19,666 | INFO     | architecture information:
[2025-12-14 07:50:12] 2025-12-14 12:49:19,695 | INFO     | executing command: cat /etc/os-release
[2025-12-14 07:50:12] 2025-12-14 12:49:19,868 | INFO     | cat /etc/os-release:
[2025-12-14 07:50:12] NAME="CentOS Linux"
[2025-12-14 07:50:12] VERSION="7 (Core)"
[2025-12-14 07:50:12] ID="centos"
[2025-12-14 07:50:12] ID_LIKE="rhel fedora"
[2025-12-14 07:50:12] VERSION_ID="7"
[2025-12-14 07:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 07:50:12] ANSI_COLOR="0;31"
[2025-12-14 07:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 07:50:12] HOME_URL="https://www.centos.org/"
[2025-12-14 07:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 07:50:12] 
[2025-12-14 07:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 07:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 07:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 07:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 07:50:12] 
[2025-12-14 07:50:12] 2025-12-14 12:49:19,869 | INFO     | ***************************************
[2025-12-14 07:50:12] 2025-12-14 12:49:20,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-14 07:50:12] 2025-12-14 12:49:20,486 | INFO     | sufficient remaining disk space (92132081664 B)
[2025-12-14 07:50:12] 2025-12-14 12:49:20,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 07:50:12] 2025-12-14 12:49:20,488 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 07:50:12] 2025-12-14 12:49:20,488 | INFO     | update_server=False
[2025-12-14 07:50:12] 2025-12-14 12:49:20,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 07:50:12] 2025-12-14 12:49:20,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:50:12] 2025-12-14 12:49:20,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 07:50:12] 2025-12-14 12:49:20,829 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 07:50:12] 2025-12-14 12:49:20,829 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 07:50:12] 2025-12-14 12:49:20,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:50:12] 2025-12-14 12:49:20,830 | INFO     | will abort loop
[2025-12-14 07:50:12] 2025-12-14 12:49:21,105 | INFO     | all data control threads have been joined
[2025-12-14 07:50:12] 2025-12-14 12:49:21,341 | INFO     | all payload control threads have been joined
[2025-12-14 07:50:12] 2025-12-14 12:49:21,495 | INFO     | [job] retrieve thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,503 | INFO     | [job] queue monitor thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 07:50:12] 2025-12-14 12:49:21,520 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,713 | INFO     | all job control threads have been joined
[2025-12-14 07:50:12] 2025-12-14 12:49:21,786 | INFO     | [data] copytool_in thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,795 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:21,847 | INFO     | [job] job monitor thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,111 | INFO     | [data] control thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,347 | INFO     | [payload] control thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,586 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,719 | INFO     | [job] control thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,858 | INFO     | [job] validate thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,955 | INFO     | [payload] validate_post thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:22,961 | INFO     | [payload] failed_post thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:23,520 | INFO     | [data] copytool_out thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:24,513 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 07:50:12] 2025-12-14 12:49:57,033 | INFO     | PID=3488448 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 07:50:12] 2025-12-14 12:49:57,034 | INFO     | .. there are 53 such processes running
[2025-12-14 07:50:12] 2025-12-14 12:49:57,035 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 07:50:12] 2025-12-14 12:49:57,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 07:50:12] 2025-12-14 12:49:57,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 07:50:12] 2025-12-14 12:50:02,083 | INFO     | [monitor] cgroup control has ended
[2025-12-14 07:50:12] 2025-12-14 12:50:04,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348493760320)>', '<ExcThread(monitor, started 140347770394368)>']
[2025-12-14 07:50:12] 2025-12-14 12:50:05,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 07:50:12] 2025-12-14 12:50:05,111 | INFO     | [monitor] control thread has ended
[2025-12-14 07:50:12] 2025-12-14 12:50:09,230 | INFO     | all workflow threads have been joined
[2025-12-14 07:50:12] 2025-12-14 12:50:09,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 07:50:12] 2025-12-14 12:50:09,231 | INFO     | traces error code: 0
[2025-12-14 07:50:12] 2025-12-14 12:50:09,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 07:50:12] 2025-12-14 12:50:10,391 [wrapper] ==== pilot stdout END ====
[2025-12-14 07:50:12] 2025-12-14 12:50:10,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 07:50:12] 2025-12-14 12:50:10,458 [wrapper] pilotpid: 3488448
[2025-12-14 07:50:12] 2025-12-14 12:50:10,560 [wrapper] Pilot exit status: 0
[2025-12-14 07:50:12] 2025-12-14 12:50:10,789 [wrapper] pandaids: 6929503345
[2025-12-14 07:50:12] 2025-12-14 12:50:11,238 [wrapper] cleanup supervisor_pilot 1242408 3488449
[2025-12-14 07:50:12] 2025-12-14 12:50:11,259 [wrapper] Test setup, not cleaning
[2025-12-14 07:50:12] 2025-12-14 12:50:11,282 [wrapper] apfmon messages muted
[2025-12-14 07:50:12] 2025-12-14 12:50:11,317 [wrapper] ==== wrapper stdout END ====
[2025-12-14 07:50:12] 2025-12-14 12:50:11,325 [wrapper] ==== wrapper stderr END ====
[2025-12-14 07:50:12]  *** Error codes and diagnostics ***
[2025-12-14 07:50:12]     "exeErrorCode": 0,
[2025-12-14 07:50:12]     "exeErrorDiag": "",
[2025-12-14 07:50:12]     "pilotErrorCode": 0,
[2025-12-14 07:50:12]     "pilotErrorDiag": "",
[2025-12-14 07:50:12]  *** Listing of results directory ***
[2025-12-14 07:50:12] total 382228
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 12:19 queuedata.json
[2025-12-14 07:50:12] -rwx------. 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas       100 Dec 13 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 07:50:12] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 21:36 run_atlas
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas       105 Dec 13 21:36 job.xml
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas 199049698 Dec 13 21:36 EVNT.47898875._000028.pool.root.1
[2025-12-14 07:50:12] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 21:36 shared
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas    592392 Dec 13 21:36 input.tar.gz
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 21:36 start_atlas.sh
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas         0 Dec 13 21:36 boinc_lockfile
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas      2497 Dec 13 21:37 pandaJob.out
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas        57 Dec 13 21:37 setup.sh.local
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas    991736 Dec 13 21:38 agis_schedconf.cvmfs.json
[2025-12-14 07:50:12] drwx------. 5 boincer umatlas      4096 Dec 13 21:38 pilot3
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas 180747339 Dec 14 07:44 HITS.47898878._000698.pool.root.1
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas       532 Dec 14 07:45 boinc_task_state.xml
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas      6879 Dec 14 07:47 init_data.xml
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas      1040 Dec 14 07:47 memory_monitor_summary.json
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas   1516240 Dec 14 07:47 agis_ddmendpoints.agis.ALL.json
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas    666750 Dec 14 07:48 log.47898878._000698.job.log.tgz.1
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas      7827 Dec 14 07:49 heartbeat.json
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas        96 Dec 14 07:49 pilot_heartbeat.json
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas      5010 Dec 14 07:50 pilotlog.txt
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 07:50 boinc_mmap_file
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas        29 Dec 14 07:50 wrapper_checkpoint.txt
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas   3178474 Dec 14 07:50 log.47898878._000698.job.log.1
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas       357 Dec 14 07:50 output.list
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas       620 Dec 14 07:50 runtime_log
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas   3860480 Dec 14 07:50 result.tar.gz
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas      9353 Dec 14 07:50 runtime_log.err
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas       661 Dec 14 07:50 dANODm0Sio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxqPKDmr9VHqn.diag
[2025-12-14 07:50:12] -rw-r--r--. 1 boincer umatlas     21313 Dec 14 07:50 stderr.txt
[2025-12-14 07:50:12] HITS file was successfully produced:
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas 180747339 Dec 14 07:44 shared/HITS.pool.root.1
[2025-12-14 07:50:12]  *** Contents of shared directory: ***
[2025-12-14 07:50:12] total 375272
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas 199049698 Dec 13 21:36 ATLAS.root_0
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas    592392 Dec 13 21:36 input.tar.gz
[2025-12-14 07:50:12] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 21:36 start_atlas.sh
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas 180747339 Dec 14 07:44 HITS.pool.root.1
[2025-12-14 07:50:12] -rw-------. 1 boincer umatlas   3860480 Dec 14 07:50 result.tar.gz
07:50:14 (3481484): run_atlas exited; CPU time 111896.015170
07:50:14 (3481484): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN