Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:26 (8539): wrapper (7.7.26015): starting
18:54:26 (8539): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 18:54:26] Arguments: --nthreads 12
[2025-12-13 18:54:26] Threads: 12
[2025-12-13 18:54:26] Checking for CVMFS
[2025-12-13 18:54:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 18:54:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 18:54:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 18:54:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 18:54:26] 2.11.2.0 2914 312848 94340 153977 1 59 15140727 20275200 1 130560 1 138181441 99.963 18291784 14994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 18:54:26] CVMFS is ok
[2025-12-13 18:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 18:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 18:54:26] Further information can be found at the LHC@home message board.
[2025-12-13 18:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 18:54:26] Checking for apptainer binary...
[2025-12-13 18:54:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 18:54:26] Running /usr/bin/apptainer --version
[2025-12-13 18:54:26] apptainer version 1.3.2-1.el7
[2025-12-13 18:54:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 18:54:28] c-205-5.aglt2.org
[2025-12-13 18:54:28] apptainer works
[2025-12-13 18:54:28] Set ATHENA_PROC_NUMBER=12
[2025-12-13 18:54:28] Set ATHENA_CORE_NUMBER=12
[2025-12-13 18:54:28] Starting ATLAS job with PandaID=6929302510
[2025-12-13 18:54:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:34:59]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:34:59]  status=None
[2025-12-13 20:34:59]  status_code=0
[2025-12-13 20:34:59]  storage_token=
[2025-12-13 20:34:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929302510/log.47898763._004505.job.log.tgz.1
[2025-12-13 20:34:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/61/log.47898763._004505.job.log.tgz.1
[2025-12-13 20:34:59]  workdir=None
[2025-12-13 20:34:59] ]
[2025-12-13 20:34:59] 2025-12-14 01:34:16,184 | INFO     | transferring file log.47898763._004505.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929302510/log.47898763._004505.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 20:34:59] 2025-12-14 01:34:16,184 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929302510/log.47898763._004505.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898763._004505.job
[2025-12-13 20:34:59] 2025-12-14 01:34:16,211 | INFO     | adding to output.list: log.47898763._004505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/61/log.47898763._004505.job.log.tg
[2025-12-13 20:34:59] 2025-12-14 01:34:16,212 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 20:34:59] 2025-12-14 01:34:16,213 | INFO     | summary of transferred files:
[2025-12-13 20:34:59] 2025-12-14 01:34:16,213 | INFO     |  -- lfn=log.47898763._004505.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 20:34:59] 2025-12-14 01:34:16,213 | INFO     | stage-out finished correctly
[2025-12-13 20:34:59] 2025-12-14 01:34:16,261 | INFO     | time since job start (5973s) is within the limit (174528.0s)
[2025-12-13 20:34:59] 2025-12-14 01:34:17,026 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 20:34:59] 2025-12-14 01:34:18,193 | INFO     | job 6929302510 has state=finished
[2025-12-13 20:34:59] 2025-12-14 01:34:18,193 | INFO     | preparing for final server update for job 6929302510 in state='finished'
[2025-12-13 20:34:59] 2025-12-14 01:34:18,194 | INFO     | this job has now completed (state=finished)
[2025-12-13 20:34:59] 2025-12-14 01:34:18,194 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 20:34:59] 2025-12-14 01:34:18,195 | INFO     | log transfer has been attempted: DONE
[2025-12-13 20:34:59] 2025-12-14 01:34:18,195 | INFO     | job 6929302510 has finished - writing final server update
[2025-12-13 20:34:59] 2025-12-14 01:34:18,195 | INFO     | total number of processed events: 400 (read)
[2025-12-13 20:34:59] 2025-12-14 01:34:18,196 | INFO     | executing command: lscpu
[2025-12-13 20:34:59] 2025-12-14 01:34:18,222 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 20:34:59] 2025-12-14 01:34:18,268 | INFO     | time since job start (5975s) is within the limit (174528.0s)
[2025-12-13 20:34:59] 2025-12-14 01:34:18,491 | WARNING  | process 18700 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 20:34:59] 2025-12-14 01:34:18,491 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929302510/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:34:59] 2025-12-14 01:34:18,579 | INFO     | number of running child processes to parent process 18700: 1
[2025-12-13 20:34:59] 2025-12-14 01:34:18,580 | INFO     | maximum number of monitored processes: 6
[2025-12-13 20:34:59] 2025-12-14 01:34:20,276 | INFO     | time since job start (5977s) is within the limit (174528.0s)
[2025-12-13 20:34:59] 2025-12-14 01:34:21,083 | INFO     | monitor loop #443: job 0:6929302510 is in state 'finished'
[2025-12-13 20:34:59] 2025-12-14 01:34:21,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:34:59] 2025-12-14 01:34:21,403 | INFO     | PID=12225 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 20:34:59] 2025-12-14 01:34:22,403 | INFO     | time since job start (5979s) is within the limit (174528.0s)
[2025-12-13 20:34:59] 2025-12-14 01:34:23,586 | INFO     | monitor loop #444: job 0:6929302510 is in state 'finished'
[2025-12-13 20:34:59] 2025-12-14 01:34:23,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,174 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 20:34:59] 2025-12-14 01:34:24,178 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-13 20:34:59] 2025-12-14 01:34:24,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929302510/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,181 | INFO     | extracted standard info from prmon json
[2025-12-13 20:34:59] 2025-12-14 01:34:24,181 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:34:59] 2025-12-14 01:34:24,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:34:59] 2025-12-14 01:34:24,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:34:59] 2025-12-14 01:34:24,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:34:59] 2025-12-14 01:34:24,184 | INFO     | fitting pss+swap vs Time
[2025-12-13 20:34:59] 2025-12-14 01:34:24,184 | INFO     | sum of square deviations: 233641590.0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,185 | INFO     | sum of deviations: -7048939180.0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,185 | INFO     | mean x: 1765673162.0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,185 | INFO     | mean y: 2711798.076923077
[2025-12-13 20:34:59] 2025-12-14 01:34:24,185 | INFO     | intersect: 53272862590.56334
[2025-12-13 20:34:59] 2025-12-14 01:34:24,185 | INFO     | chi2: 0.08913211846086432
[2025-12-13 20:34:59] 2025-12-14 01:34:24,186 | INFO     | current memory leak: -30.17 B/s (using 91 data points, chi2=0.09)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,186 | INFO     | could have reported an average CPU frequency of 2126 MHz (7 samples)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,186 | INFO     | ..............................
[2025-12-13 20:34:59] 2025-12-14 01:34:24,186 | INFO     | . Timing measurements:
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . get job = 0 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . initial setup = 2 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . payload setup = 7 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . stage-in = 0 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . payload execution = 5945 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . stage-out = 0 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | . log creation = 0 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,187 | INFO     | ..............................
[2025-12-13 20:34:59] 2025-12-14 01:34:24,269 | INFO     | 
[2025-12-13 20:34:59] 2025-12-14 01:34:24,269 | INFO     | job summary report
[2025-12-13 20:34:59] 2025-12-14 01:34:24,269 | INFO     | --------------------------------------------------
[2025-12-13 20:34:59] 2025-12-14 01:34:24,269 | INFO     | PanDA job id: 6929302510
[2025-12-13 20:34:59] 2025-12-14 01:34:24,269 | INFO     | task id: 47898763
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | errors: (none)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | pilot state: finished 
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | transexitcode: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | exeerrorcode: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,270 | INFO     | exeerrordiag: 
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | exitcode: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | exitmsg: OK
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | cpuconsumptiontime: 65673 s
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | nevents: 400
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | neventsw: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | pid: 18700
[2025-12-13 20:34:59] 2025-12-14 01:34:24,271 | INFO     | pgrp: 18700
[2025-12-13 20:34:59] 2025-12-14 01:34:24,272 | INFO     | corecount: 12
[2025-12-13 20:34:59] 2025-12-14 01:34:24,272 | INFO     | event service: False
[2025-12-13 20:34:59] 2025-12-14 01:34:24,272 | INFO     | sizes: {0: 2283124, 1: 2283980, 6: 2284242, 12: 2284270, 5955: 2310990, 5956: 2319988, 5957: 2320172, 5964: 2320366}
[2025-12-13 20:34:59] 2025-12-14 01:34:24,272 | INFO     | --------------------------------------------------
[2025-12-13 20:34:59] 2025-12-14 01:34:24,272 | INFO     | 
[2025-12-13 20:34:59] 2025-12-14 01:34:24,273 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 20:34:59] 2025-12-14 01:34:24,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:34:59] 2025-12-14 01:34:24,299 | INFO     | job 6929302510 has completed (purged errors)
[2025-12-13 20:34:59] 2025-12-14 01:34:24,300 | INFO     | overall cleanup function is called
[2025-12-13 20:34:59] 2025-12-14 01:34:25,307 | INFO     | --- collectZombieJob: --- 10, [18700]
[2025-12-13 20:34:59] 2025-12-14 01:34:25,308 | INFO     | zombie collector waiting for pid 18700
[2025-12-13 20:34:59] 2025-12-14 01:34:25,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:34:59] 2025-12-14 01:34:25,314 | INFO     | collected zombie processes
[2025-12-13 20:34:59] 2025-12-14 01:34:25,314 | INFO     | will attempt to kill all subprocesses of pid=18700
[2025-12-13 20:34:59] 2025-12-14 01:34:25,406 | INFO     | process IDs to be killed: [18700] (in reverse order)
[2025-12-13 20:34:59] 2025-12-14 01:34:25,458 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:34:59] 2025-12-14 01:34:25,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:34:59] 2025-12-14 01:34:25,463 | INFO     | did not find any defunct processes belonging to 18700
[2025-12-13 20:34:59] 2025-12-14 01:34:25,466 | INFO     | did not find any defunct processes belonging to 18700
[2025-12-13 20:34:59] 2025-12-14 01:34:25,466 | INFO     | ready for new job
[2025-12-13 20:34:59] 2025-12-14 01:34:25,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:34:59] 2025-12-14 01:34:25,468 | INFO     | ***************************************
[2025-12-13 20:34:59] 2025-12-14 01:34:25,468 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:34:59] 2025-12-14 01:34:25,469 | INFO     | ***************************************
[2025-12-13 20:34:59] 2025-12-14 01:34:25,469 | INFO     | 
[2025-12-13 20:34:59] 2025-12-14 01:34:25,469 | INFO     | architecture information:
[2025-12-13 20:34:59] 2025-12-14 01:34:25,470 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:34:59] 2025-12-14 01:34:25,485 | INFO     | cat /etc/os-release:
[2025-12-13 20:34:59] NAME="CentOS Linux"
[2025-12-13 20:34:59] VERSION="7 (Core)"
[2025-12-13 20:34:59] ID="centos"
[2025-12-13 20:34:59] ID_LIKE="rhel fedora"
[2025-12-13 20:34:59] VERSION_ID="7"
[2025-12-13 20:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:34:59] ANSI_COLOR="0;31"
[2025-12-13 20:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:34:59] HOME_URL="https://www.centos.org/"
[2025-12-13 20:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:34:59] 
[2025-12-13 20:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:34:59] 
[2025-12-13 20:34:59] 2025-12-14 01:34:25,485 | INFO     | ***************************************
[2025-12-13 20:34:59] 2025-12-14 01:34:25,988 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 20:34:59] 2025-12-14 01:34:26,005 | INFO     | sufficient remaining disk space (29323427840 B)
[2025-12-13 20:34:59] 2025-12-14 01:34:26,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:34:59] 2025-12-14 01:34:26,006 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:34:59] 2025-12-14 01:34:26,006 | INFO     | update_server=False
[2025-12-13 20:34:59] 2025-12-14 01:34:26,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:34:59] 2025-12-14 01:34:26,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:34:59] 2025-12-14 01:34:26,090 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 20:34:59] 2025-12-14 01:34:26,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 20:34:59] 2025-12-14 01:34:26,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:34:59] 2025-12-14 01:34:26,090 | INFO     | will abort loop
[2025-12-13 20:34:59] 2025-12-14 01:34:26,295 | INFO     | all data control threads have been joined
[2025-12-13 20:34:59] 2025-12-14 01:34:26,606 | INFO     | all job control threads have been joined
[2025-12-13 20:34:59] 2025-12-14 01:34:26,645 | INFO     | all payload control threads have been joined
[2025-12-13 20:34:59] 2025-12-14 01:34:26,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:34:59] 2025-12-14 01:34:27,012 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,012 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,025 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,096 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,301 | INFO     | [data] control thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,492 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,496 | INFO     | [job] validate thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,607 | INFO     | [job] control thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:34:59] 2025-12-14 01:34:27,650 | INFO     | [payload] control thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:27,701 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:28,018 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:28,111 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:28,231 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:28,827 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:31,618 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:34:59] 2025-12-14 01:34:52,301 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:34:59] 2025-12-14 01:34:53,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313585469248)>', '<ExcThread(monitor, started 140313024788224)>']
[2025-12-13 20:34:59] 2025-12-14 01:34:55,609 | INFO     | PID=12225 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 20:34:59] 2025-12-14 01:34:55,609 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:34:59] 2025-12-14 01:34:55,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:34:59] 2025-12-14 01:34:55,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:34:59] 2025-12-14 01:34:55,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:34:59] 2025-12-14 01:34:55,610 | INFO     | [monitor] control thread has ended
[2025-12-13 20:34:59] 2025-12-14 01:34:58,979 | INFO     | all workflow threads have been joined
[2025-12-13 20:34:59] 2025-12-14 01:34:58,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:34:59] 2025-12-14 01:34:58,979 | INFO     | traces error code: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:58,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:34:59] 2025-12-14 01:34:59,066 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:34:59] 2025-12-14 01:34:59,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:34:59] 2025-12-14 01:34:59,074 [wrapper] pilotpid: 12225
[2025-12-13 20:34:59] 2025-12-14 01:34:59,078 [wrapper] Pilot exit status: 0
[2025-12-13 20:34:59] 2025-12-14 01:34:59,095 [wrapper] pandaids: 6929302510
[2025-12-13 20:34:59] 2025-12-14 01:34:59,136 [wrapper] cleanup supervisor_pilot 18453 12226
[2025-12-13 20:34:59] 2025-12-14 01:34:59,139 [wrapper] Test setup, not cleaning
[2025-12-13 20:34:59] 2025-12-14 01:34:59,143 [wrapper] apfmon messages muted
[2025-12-13 20:34:59] 2025-12-14 01:34:59,147 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:34:59] 2025-12-14 01:34:59,151 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:34:59]  *** Error codes and diagnostics ***
[2025-12-13 20:34:59]     "exeErrorCode": 0,
[2025-12-13 20:34:59]     "exeErrorDiag": "",
[2025-12-13 20:34:59]     "pilotErrorCode": 0,
[2025-12-13 20:34:59]     "pilotErrorDiag": "",
[2025-12-13 20:34:59]  *** Listing of results directory ***
[2025-12-13 20:34:59] total 436400
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 20:34:59] -rwx------ 1 boincer umatlas     36322 Dec 13 06:37 runpilot2-wrapper.sh
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:38 queuedata.json
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas       100 Dec 13 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:34:59] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 18:54 run_atlas
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas       105 Dec 13 18:54 job.xml
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas 223259032 Dec 13 18:54 EVNT.47898761._000256.pool.root.1
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 18:54 start_atlas.sh
[2025-12-13 20:34:59] drwxrwx--x 2 boincer umatlas      4096 Dec 13 18:54 shared
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas    592405 Dec 13 18:54 input.tar.gz
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas         0 Dec 13 18:54 boinc_lockfile
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas      2504 Dec 13 18:54 pandaJob.out
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas        57 Dec 13 18:54 setup.sh.local
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas    991736 Dec 13 18:54 agis_schedconf.cvmfs.json
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas   1516240 Dec 13 18:54 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:34:59] drwx------ 5 boincer umatlas      4096 Dec 13 18:54 pilot3
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 20:28 init_data.xml
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas 217204667 Dec 13 20:33 HITS.47898763._004505.pool.root.1
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas        95 Dec 13 20:34 pilot_heartbeat.json
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas       529 Dec 13 20:34 boinc_task_state.xml
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas      1047 Dec 13 20:34 memory_monitor_summary.json
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas    393981 Dec 13 20:34 log.47898763._004505.job.log.tgz.1
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas      7844 Dec 13 20:34 heartbeat.json
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 20:34 boinc_mmap_file
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas        27 Dec 13 20:34 wrapper_checkpoint.txt
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas      4932 Dec 13 20:34 pilotlog.txt
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas    851215 Dec 13 20:34 log.47898763._004505.job.log.1
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas       357 Dec 13 20:34 output.list
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas       620 Dec 13 20:34 runtime_log
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas   1259520 Dec 13 20:34 result.tar.gz
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 20:34 runtime_log.err
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas       658 Dec 13 20:34 MslMDmH7co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMJTKDm5I7sfn.diag
[2025-12-13 20:34:59] -rw-r--r-- 1 boincer umatlas     22180 Dec 13 20:34 stderr.txt
[2025-12-13 20:34:59] HITS file was successfully produced:
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas 217204667 Dec 13 20:33 shared/HITS.pool.root.1
[2025-12-13 20:34:59]  *** Contents of shared directory: ***
[2025-12-13 20:34:59] total 431980
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas 223259032 Dec 13 18:54 ATLAS.root_0
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 18:54 start_atlas.sh
[2025-12-13 20:34:59] -rw-r--r-- 2 boincer umatlas    592405 Dec 13 18:54 input.tar.gz
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas 217204667 Dec 13 20:33 HITS.pool.root.1
[2025-12-13 20:34:59] -rw------- 1 boincer umatlas   1259520 Dec 13 20:34 result.tar.gz
20:35:00 (8539): run_atlas exited; CPU time 65656.496693
20:35:00 (8539): called boinc_finish(0)

</stderr_txt>
]]>

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