Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:31:55 (4546): wrapper (7.7.26015): starting
18:31:55 (4546): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 18:31:55] Arguments: --nthreads 8
[2025-12-13 18:31:55] Threads: 8
[2025-12-13 18:31:55] Checking for CVMFS
[2025-12-13 18:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 18:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 18:31:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 18:31:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 18:31:55] 2.11.2.0 26356 132725 140864 153977 3 188 9989666 18432001 1833 130560 0 97225961 99.976 5573740 23516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 18:31:55] CVMFS is ok
[2025-12-13 18:31:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 18:31:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 18:31:55] Further information can be found at the LHC@home message board.
[2025-12-13 18:31:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 18:31:55] Checking for apptainer binary...
[2025-12-13 18:31:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 18:31:55] Running /usr/bin/apptainer --version
[2025-12-13 18:31:55] apptainer version 1.3.2-1.el7
[2025-12-13 18:31:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 18:31:56] c-206-6.aglt2.org
[2025-12-13 18:31:56] apptainer works
[2025-12-13 18:31:56] Set ATHENA_PROC_NUMBER=8
[2025-12-13 18:31:56] Set ATHENA_CORE_NUMBER=8
[2025-12-13 18:31:56] Starting ATLAS job with PandaID=6929301979
[2025-12-13 18:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 22:51:39]  *** The last 200 lines of the pilot log: ***
[2025-12-13 22:51:39] 2025-12-14 03:50:35,422 | INFO     | monitor loop #1118: job 0:6929301979 is in state 'finished'
[2025-12-13 22:51:39] 2025-12-14 03:50:35,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,843 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 22:51:39] 2025-12-14 03:50:36,847 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2350.2916666666665
[2025-12-13 22:51:39] 2025-12-14 03:50:36,850 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929301979/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,850 | INFO     | extracted standard info from prmon json
[2025-12-13 22:51:39] 2025-12-14 03:50:36,851 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 22:51:39] 2025-12-14 03:50:36,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 22:51:39] 2025-12-14 03:50:36,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 22:51:39] 2025-12-14 03:50:36,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 22:51:39] 2025-12-14 03:50:36,855 | INFO     | fitting pss+swap vs Time
[2025-12-13 22:51:39] 2025-12-14 03:50:36,855 | INFO     | sum of square deviations: 5081276667.5
[2025-12-13 22:51:39] 2025-12-14 03:50:36,857 | INFO     | sum of deviations: 27614419643.99999
[2025-12-13 22:51:39] 2025-12-14 03:50:36,857 | INFO     | mean x: 1765676469.5
[2025-12-13 22:51:39] 2025-12-14 03:50:36,857 | INFO     | mean y: 2488708.976377953
[2025-12-13 22:51:39] 2025-12-14 03:50:36,857 | INFO     | intersect: -9593157065.670736
[2025-12-13 22:51:39] 2025-12-14 03:50:36,857 | INFO     | chi2: 1.5175916145930748
[2025-12-13 22:51:39] 2025-12-14 03:50:36,858 | INFO     | sum of square deviations: 4787066500.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,859 | INFO     | sum of deviations: 26997780525.999992
[2025-12-13 22:51:39] 2025-12-14 03:50:36,859 | INFO     | mean x: 1765676317.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,859 | INFO     | mean y: 2488389.297188755
[2025-12-13 22:51:39] 2025-12-14 03:50:36,859 | INFO     | intersect: -9955455935.546011
[2025-12-13 22:51:39] 2025-12-14 03:50:36,860 | INFO     | chi2: 1.518240846410583
[2025-12-13 22:51:39] 2025-12-14 03:50:36,860 | INFO     | current chi2=1.518240846410583 (change=-0.04278040358586749 %)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,860 | INFO     | right removable region: 248
[2025-12-13 22:51:39] 2025-12-14 03:50:36,860 | INFO     | sum of square deviations: 4787066500.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | sum of deviations: -12024297369.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | mean x: 1765676622.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | mean y: 2509088.5542168673
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | intersect: 4437588643.103837
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | chi2: 0.1012759879698757
[2025-12-13 22:51:39] 2025-12-14 03:50:36,862 | INFO     | current chi2=0.1012759879698757 (change=93.32653218454745 %)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,863 | INFO     | sum of square deviations: 4504437945.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,864 | INFO     | sum of deviations: -19403607363.999985
[2025-12-13 22:51:39] 2025-12-14 03:50:36,864 | INFO     | mean x: 1765676774.5
[2025-12-13 22:51:39] 2025-12-14 03:50:36,864 | INFO     | mean y: 2513052.6393442624
[2025-12-13 22:51:39] 2025-12-14 03:50:36,864 | INFO     | intersect: 7608456187.489643
[2025-12-13 22:51:39] 2025-12-14 03:50:36,865 | INFO     | chi2: 0.053414705456724144
[2025-12-13 22:51:39] 2025-12-14 03:50:36,865 | INFO     | current chi2=0.053414705456724144 (change=47.25827263950047 %)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,865 | INFO     | sum of square deviations: 4233158440.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,866 | INFO     | sum of deviations: -17444518371.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | mean x: 1765676927.0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | mean y: 2511947.518828452
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | intersect: 7278729936.2559395
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | chi2: 0.05288108773144255
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | current chi2=0.05288108773144255 (change=0.9990090195553386 %)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,867 | INFO     | left removable region: 30
[2025-12-13 22:51:39] 2025-12-14 03:50:36,868 | INFO     | sum of square deviations: 3212467674.5
[2025-12-13 22:51:39] 2025-12-14 03:50:36,869 | INFO     | sum of deviations: -6272469539.500003
[2025-12-13 22:51:39] 2025-12-14 03:50:36,869 | INFO     | mean x: 1765677201.5
[2025-12-13 22:51:39] 2025-12-14 03:50:36,869 | INFO     | mean y: 2505104.151376147
[2025-12-13 22:51:39] 2025-12-14 03:50:36,869 | INFO     | intersect: 3450059316.419718
[2025-12-13 22:51:39] 2025-12-14 03:50:36,869 | INFO     | chi2: 0.03617054197003773
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | current memory leak: -1.95 B/s (using 218 data points, chi2=0.04)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | could have reported an average CPU frequency of 2573 MHz (12 samples)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | ..............................
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | . Timing measurements:
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | . get job = 0 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,870 | INFO     | . initial setup = 2 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | . payload setup = 4 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | . stage-in = 0 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | . payload execution = 15474 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | . stage-out = 2 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | . log creation = 0 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,871 | INFO     | ..............................
[2025-12-13 22:51:39] 2025-12-14 03:50:36,970 | INFO     | time since job start (15508s) is within the limit (174528.0s)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,974 | INFO     | 
[2025-12-13 22:51:39] 2025-12-14 03:50:36,974 | INFO     | job summary report
[2025-12-13 22:51:39] 2025-12-14 03:50:36,974 | INFO     | --------------------------------------------------
[2025-12-13 22:51:39] 2025-12-14 03:50:36,974 | INFO     | PanDA job id: 6929301979
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | task id: 47898763
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | errors: (none)
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | pilot state: finished 
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | transexitcode: 0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,975 | INFO     | exeerrorcode: 0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | exeerrordiag: 
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | exitcode: 0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | exitmsg: OK
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | cpuconsumptiontime: 117743 s
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | nevents: 400
[2025-12-13 22:51:39] 2025-12-14 03:50:36,976 | INFO     | neventsw: 0
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | pid: 14766
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | pgrp: 14766
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | corecount: 8
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | event service: False
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | sizes: {0: 2283953, 4: 2284215, 11: 2284243, 15483: 2315453, 15484: 2315452, 15487: 2324506, 15489: 2324690, 15494: 2324884}
[2025-12-13 22:51:39] 2025-12-14 03:50:36,977 | INFO     | --------------------------------------------------
[2025-12-13 22:51:39] 2025-12-14 03:50:36,978 | INFO     | 
[2025-12-13 22:51:39] 2025-12-14 03:50:36,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 22:51:39] 2025-12-14 03:50:37,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 22:51:39] 2025-12-14 03:50:37,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 22:51:39] 2025-12-14 03:50:37,008 | INFO     | job 6929301979 has completed (purged errors)
[2025-12-13 22:51:39] 2025-12-14 03:50:37,008 | INFO     | overall cleanup function is called
[2025-12-13 22:51:39] 2025-12-14 03:50:38,016 | INFO     | --- collectZombieJob: --- 10, [14766]
[2025-12-13 22:51:39] 2025-12-14 03:50:38,022 | INFO     | zombie collector waiting for pid 14766
[2025-12-13 22:51:39] 2025-12-14 03:50:38,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 22:51:39] 2025-12-14 03:50:38,022 | INFO     | collected zombie processes
[2025-12-13 22:51:39] 2025-12-14 03:50:38,022 | INFO     | will attempt to kill all subprocesses of pid=14766
[2025-12-13 22:51:39] 2025-12-14 03:50:38,189 | INFO     | process IDs to be killed: [14766] (in reverse order)
[2025-12-13 22:51:39] 2025-12-14 03:50:38,236 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 22:51:39] 2025-12-14 03:50:38,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 22:51:39] 2025-12-14 03:50:38,241 | INFO     | did not find any defunct processes belonging to 14766
[2025-12-13 22:51:39] 2025-12-14 03:50:38,246 | INFO     | did not find any defunct processes belonging to 14766
[2025-12-13 22:51:39] 2025-12-14 03:50:38,246 | INFO     | ready for new job
[2025-12-13 22:51:39] 2025-12-14 03:50:38,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 22:51:39] 2025-12-14 03:50:38,249 | INFO     | ***************************************
[2025-12-13 22:51:39] 2025-12-14 03:50:38,249 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 22:51:39] 2025-12-14 03:50:38,249 | INFO     | ***************************************
[2025-12-13 22:51:39] 2025-12-14 03:50:38,249 | INFO     | 
[2025-12-13 22:51:39] 2025-12-14 03:50:38,250 | INFO     | architecture information:
[2025-12-13 22:51:39] 2025-12-14 03:50:38,251 | INFO     | executing command: cat /etc/os-release
[2025-12-13 22:51:39] 2025-12-14 03:50:38,263 | INFO     | cat /etc/os-release:
[2025-12-13 22:51:39] NAME="CentOS Linux"
[2025-12-13 22:51:39] VERSION="7 (Core)"
[2025-12-13 22:51:39] ID="centos"
[2025-12-13 22:51:39] ID_LIKE="rhel fedora"
[2025-12-13 22:51:39] VERSION_ID="7"
[2025-12-13 22:51:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 22:51:39] ANSI_COLOR="0;31"
[2025-12-13 22:51:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 22:51:39] HOME_URL="https://www.centos.org/"
[2025-12-13 22:51:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 22:51:39] 
[2025-12-13 22:51:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 22:51:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 22:51:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 22:51:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 22:51:39] 
[2025-12-13 22:51:39] 2025-12-14 03:50:38,263 | INFO     | ***************************************
[2025-12-13 22:51:39] 2025-12-14 03:50:38,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 22:51:39] 2025-12-14 03:50:38,778 | INFO     | sufficient remaining disk space (28163702784 B)
[2025-12-13 22:51:39] 2025-12-14 03:50:38,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 22:51:39] 2025-12-14 03:50:38,778 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 22:51:39] 2025-12-14 03:50:38,779 | INFO     | update_server=False
[2025-12-13 22:51:39] 2025-12-14 03:50:38,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 22:51:39] 2025-12-14 03:50:38,779 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-13 22:51:39] 2025-12-14 03:50:38,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:51:39] 2025-12-14 03:50:38,780 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 22:51:39] 2025-12-14 03:50:38,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 22:51:39] 2025-12-14 03:50:38,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 22:51:39] 2025-12-14 03:50:38,928 | INFO     | all payload control threads have been joined
[2025-12-13 22:51:39] 2025-12-14 03:50:38,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:51:39] 2025-12-14 03:50:38,930 | INFO     | aborting loop
[2025-12-13 22:51:39] 2025-12-14 03:50:39,265 | INFO     | all job control threads have been joined
[2025-12-13 22:51:39] 2025-12-14 03:50:39,530 | INFO     | all data control threads have been joined
[2025-12-13 22:51:39] 2025-12-14 03:50:39,784 | INFO     | [job] retrieve thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:39,785 | INFO     | [job] queue monitor thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:39,932 | INFO     | [job] job monitor thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:39,934 | INFO     | [payload] control thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:39,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:39,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 22:51:39] 2025-12-14 03:50:40,022 | INFO     | [job] validate thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:40,269 | INFO     | [job] control thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:40,375 | INFO     | [payload] validate_post thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:40,535 | INFO     | [data] control thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:40,947 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:41,042 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:41,114 | INFO     | [data] copytool_in thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:41,204 | INFO     | [payload] failed_post thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:41,220 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:41,997 | INFO     | [data] copytool_out thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:50:42,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 22:51:39] 2025-12-14 03:50:46,018 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 22:51:39] 2025-12-14 03:51:33,025 | INFO     | [monitor] cgroup control has ended
[2025-12-13 22:51:39] 2025-12-14 03:51:34,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850486597440)>', '<ExcThread(monitor, started 139849831016192)>']
[2025-12-13 22:51:39] 2025-12-14 03:51:35,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 22:51:39] 2025-12-14 03:51:35,046 | INFO     | [monitor] control thread has ended
[2025-12-13 22:51:39] 2025-12-14 03:51:39,538 | INFO     | all workflow threads have been joined
[2025-12-13 22:51:39] 2025-12-14 03:51:39,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 22:51:39] 2025-12-14 03:51:39,539 | INFO     | traces error code: 0
[2025-12-13 22:51:39] 2025-12-14 03:51:39,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 22:51:39] 2025-12-14 03:51:39,665 [wrapper] ==== pilot stdout END ====
[2025-12-13 22:51:39] 2025-12-14 03:51:39,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 22:51:39] 2025-12-14 03:51:39,671 [wrapper] pilotpid: 8299
[2025-12-13 22:51:39] 2025-12-14 03:51:39,673 [wrapper] Pilot exit status: 0
[2025-12-13 22:51:39] 2025-12-14 03:51:39,685 [wrapper] pandaids: 6929301979
[2025-12-13 22:51:39] 2025-12-14 03:51:39,734 [wrapper] cleanup supervisor_pilot 10930 8300
[2025-12-13 22:51:39] 2025-12-14 03:51:39,737 [wrapper] Test setup, not cleaning
[2025-12-13 22:51:39] 2025-12-14 03:51:39,740 [wrapper] apfmon messages muted
[2025-12-13 22:51:39] 2025-12-14 03:51:39,742 [wrapper] ==== wrapper stdout END ====
[2025-12-13 22:51:39] 2025-12-14 03:51:39,744 [wrapper] ==== wrapper stderr END ====
[2025-12-13 22:51:39]  *** Error codes and diagnostics ***
[2025-12-13 22:51:39]     "exeErrorCode": 0,
[2025-12-13 22:51:39]     "exeErrorDiag": "",
[2025-12-13 22:51:39]     "pilotErrorCode": 0,
[2025-12-13 22:51:39]     "pilotErrorDiag": "",
[2025-12-13 22:51:39]  *** Listing of results directory ***
[2025-12-13 22:51:39] total 442752
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 22:51:39] -rwx------ 1 boincer umatlas     36322 Dec 13 06:37 runpilot2-wrapper.sh
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:38 queuedata.json
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas       100 Dec 13 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 22:51:39] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 18:31 run_atlas
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas       105 Dec 13 18:31 job.xml
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas 223208827 Dec 13 18:31 EVNT.47898761._000239.pool.root.1
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 18:31 start_atlas.sh
[2025-12-13 22:51:39] drwxrwx--x 2 boincer umatlas      4096 Dec 13 18:31 shared
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas    592402 Dec 13 18:31 input.tar.gz
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas         0 Dec 13 18:31 boinc_lockfile
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas      2505 Dec 13 18:31 pandaJob.out
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas        57 Dec 13 18:31 setup.sh.local
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas    991736 Dec 13 18:32 agis_schedconf.cvmfs.json
[2025-12-13 22:51:39] drwx------ 5 boincer umatlas      4096 Dec 13 18:32 pilot3
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 22:46 init_data.xml
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas 220959077 Dec 13 22:49 HITS.47898763._004091.pool.root.1
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas       531 Dec 13 22:50 boinc_task_state.xml
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas      1051 Dec 13 22:50 memory_monitor_summary.json
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas        95 Dec 13 22:50 pilot_heartbeat.json
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas   1516240 Dec 13 22:50 agis_ddmendpoints.agis.ALL.json
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas    481929 Dec 13 22:50 log.47898763._004091.job.log.tgz.1
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas      7849 Dec 13 22:50 heartbeat.json
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 22:51 boinc_mmap_file
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas        29 Dec 13 22:51 wrapper_checkpoint.txt
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas      4552 Dec 13 22:51 pilotlog.txt
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas   2158615 Dec 13 22:51 log.47898763._004091.job.log.1
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas       357 Dec 13 22:51 output.list
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas       620 Dec 13 22:51 runtime_log
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas   2662400 Dec 13 22:51 result.tar.gz
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 22:51 runtime_log.err
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas       661 Dec 13 22:51 F0ZKDm26co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma8OKDmAbuhSo.diag
[2025-12-13 22:51:39] -rw-r--r-- 1 boincer umatlas     21046 Dec 13 22:51 stderr.txt
[2025-12-13 22:51:39] HITS file was successfully produced:
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas 220959077 Dec 13 22:49 shared/HITS.pool.root.1
[2025-12-13 22:51:39]  *** Contents of shared directory: ***
[2025-12-13 22:51:39] total 436968
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas 223208827 Dec 13 18:31 ATLAS.root_0
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 18:31 start_atlas.sh
[2025-12-13 22:51:39] -rw-r--r-- 2 boincer umatlas    592402 Dec 13 18:31 input.tar.gz
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas 220959077 Dec 13 22:49 HITS.pool.root.1
[2025-12-13 22:51:39] -rw------- 1 boincer umatlas   2662400 Dec 13 22:51 result.tar.gz
22:51:41 (4546): run_atlas exited; CPU time 117935.966178
22:51:41 (4546): called boinc_finish(0)

</stderr_txt>
]]>

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