Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
18:51:32 (414511): wrapper (7.7.26015): starting
18:51:32 (414511): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 18:51:32] Arguments: --nthreads 12
[2025-12-15 18:51:32] Threads: 12
[2025-12-15 18:51:32] Checking for CVMFS
[2025-12-15 18:51:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 18:51:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 18:51:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 18:51:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 18:51:33] 2.13.3.0 11319 13667 56016 154054 0 188 2227112 4096001 17423 130560 0 2283016506 100.000 1171238 529 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-15 18:51:33] CVMFS is ok
[2025-12-15 18:51:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 18:51:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-15 18:51:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-15 18:51:33] Further information can be found at the LHC@home message board.
[2025-12-15 18:51:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 18:51:33] Checking for apptainer binary...
[2025-12-15 18:51:33] apptainer is not installed, using version from CVMFS
[2025-12-15 18:51:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 18:51:33] 7950x-linux
[2025-12-15 18:51:33] apptainer works
[2025-12-15 18:51:33] Set ATHENA_PROC_NUMBER=12
[2025-12-15 18:51:33] Set ATHENA_CORE_NUMBER=12
[2025-12-15 18:51:33] Starting ATLAS job with PandaID=6929301249
[2025-12-15 18:51:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc569/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 00:55:37]  *** The last 200 lines of the pilot log: ***
[2025-12-16 00:55:37] 2025-12-16 08:54:58,957 | INFO     | time since job start (21787s) is within the limit (174528.0s)
[2025-12-16 00:55:37] 2025-12-16 08:55:00,964 | INFO     | time since job start (21789s) is within the limit (174528.0s)
[2025-12-16 00:55:37] 2025-12-16 08:55:01,405 | INFO     | monitor loop #1557: job 0:6929301249 is in state 'finished'
[2025-12-16 00:55:37] 2025-12-16 08:55:01,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 00:55:37] 2025-12-16 08:55:02,969 | INFO     | time since job start (21791s) is within the limit (174528.0s)
[2025-12-16 00:55:37] 2025-12-16 08:55:03,915 | INFO     | monitor loop #1558: job 0:6929301249 is in state 'finished'
[2025-12-16 00:55:37] 2025-12-16 08:55:03,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,445 | INFO     | PID=418403 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 00:55:37] 2025-12-16 08:55:04,445 | INFO     | .. there are 20 such processes running
[2025-12-16 00:55:37] 2025-12-16 08:55:04,530 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 00:55:37] 2025-12-16 08:55:04,532 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9906562500014
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | INFO     | using path: /var/lib/multiboinc/boinc569/slots/4/PanDA_Pilot-6929301249/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | INFO     | extracted standard info from prmon json
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 00:55:37] 2025-12-16 08:55:04,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 00:55:37] 2025-12-16 08:55:04,539 | INFO     | fitting pss+swap vs Time
[2025-12-16 00:55:37] 2025-12-16 08:55:04,540 | INFO     | sum of square deviations: 14108461738.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | sum of deviations: 60073934844.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | mean x: 1765864405.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | mean y: 2660393.8263305323
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | intersect: -7516403355.241679
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | chi2: 1.1635237590478296
[2025-12-16 00:55:37] 2025-12-16 08:55:04,542 | INFO     | sum of square deviations: 13523929848.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | sum of deviations: 58865558821.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | mean x: 1765864252.5
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | mean y: 2660078.5511363638
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | intersect: -7683610642.589323
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | chi2: 1.1636820032173898
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | current chi2=1.1636820032173898 (change=-0.013600424428782443 %)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,544 | INFO     | right removable region: 351
[2025-12-16 00:55:37] 2025-12-16 08:55:04,545 | INFO     | sum of square deviations: 13523929848.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,546 | INFO     | sum of deviations: 13720491063.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,546 | INFO     | mean x: 1765864557.5
[2025-12-16 00:55:37] 2025-12-16 08:55:04,546 | INFO     | mean y: 2672392.6875
[2025-12-16 00:55:37] 2025-12-16 08:55:04,546 | INFO     | intersect: -1788857817.2411075
[2025-12-16 00:55:37] 2025-12-16 08:55:04,547 | INFO     | chi2: 0.004373176607302915
[2025-12-16 00:55:37] 2025-12-16 08:55:04,547 | INFO     | current chi2=0.004373176607302915 (change=99.6241437638642 %)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,547 | INFO     | sum of square deviations: 12955770358.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,548 | INFO     | sum of deviations: 13337197807.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | mean x: 1765864710.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | mean y: 2672494.311239193
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | intersect: -1815180577.0908692
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | chi2: 0.004280742895914636
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | current chi2=0.004280742895914636 (change=2.113651464107832 %)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | left removable region: 20
[2025-12-16 00:55:37] 2025-12-16 08:55:04,549 | INFO     | sum of square deviations: 11244973630.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | sum of deviations: 8821689764.999998
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | mean x: 1765864832.0
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | mean y: 2673448.5347432024
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | intersect: -1382648760.960544
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | chi2: 0.0018509043450487483
[2025-12-16 00:55:37] 2025-12-16 08:55:04,551 | INFO     | current memory leak: 0.78 B/s (using 331 data points, chi2=0.00)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | could have reported an average CPU frequency of 3999 MHz (16 samples)
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | ..............................
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . Timing measurements:
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . get job = 0 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . initial setup = 4 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . payload setup = 9 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . stage-in = 0 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . payload execution = 21747 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . stage-out = 2 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | . log creation = 0 s
[2025-12-16 00:55:37] 2025-12-16 08:55:04,552 | INFO     | ..............................
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | 
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | job summary report
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | --------------------------------------------------
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | PanDA job id: 6929301249
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | task id: 47898763
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | errors: (none)
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | pilot state: finished 
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | transexitcode: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | exeerrorcode: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | exeerrordiag: 
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | exitcode: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | exitmsg: OK
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | cpuconsumptiontime: 33557 s
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | nevents: 400
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | neventsw: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | pid: 429276
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | pgrp: 429276
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | corecount: 12
[2025-12-16 00:55:37] 2025-12-16 08:55:05,011 | INFO     | event service: False
[2025-12-16 00:55:37] 2025-12-16 08:55:05,012 | INFO     | sizes: {0: 2283739, 1: 2283994, 8: 2284256, 12: 2284284, 21760: 2318083, 21763: 2327293, 21774: 2327431}
[2025-12-16 00:55:37] 2025-12-16 08:55:05,012 | INFO     | --------------------------------------------------
[2025-12-16 00:55:37] 2025-12-16 08:55:05,012 | INFO     | 
[2025-12-16 00:55:37] 2025-12-16 08:55:05,012 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc569/slots/4
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | job 6929301249 has completed (purged errors)
[2025-12-16 00:55:37] 2025-12-16 08:55:05,045 | INFO     | overall cleanup function is called
[2025-12-16 00:55:37] 2025-12-16 08:55:06,053 | INFO     | --- collectZombieJob: --- 10, [429276]
[2025-12-16 00:55:37] 2025-12-16 08:55:06,053 | INFO     | zombie collector waiting for pid 429276
[2025-12-16 00:55:37] 2025-12-16 08:55:06,053 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 00:55:37] 2025-12-16 08:55:06,053 | INFO     | collected zombie processes
[2025-12-16 00:55:37] 2025-12-16 08:55:06,053 | INFO     | will attempt to kill all subprocesses of pid=429276
[2025-12-16 00:55:37] 2025-12-16 08:55:06,616 | INFO     | process IDs to be killed: [429276] (in reverse order)
[2025-12-16 00:55:37] 2025-12-16 08:55:06,808 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 00:55:37] 2025-12-16 08:55:06,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 00:55:37] 2025-12-16 08:55:06,825 | INFO     | did not find any defunct processes belonging to 429276
[2025-12-16 00:55:37] 2025-12-16 08:55:06,847 | INFO     | did not find any defunct processes belonging to 429276
[2025-12-16 00:55:37] 2025-12-16 08:55:06,847 | INFO     | ready for new job
[2025-12-16 00:55:37] 2025-12-16 08:55:06,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 00:55:37] 2025-12-16 08:55:06,850 | INFO     | ***************************************
[2025-12-16 00:55:37] 2025-12-16 08:55:06,850 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 00:55:37] 2025-12-16 08:55:06,850 | INFO     | ***************************************
[2025-12-16 00:55:37] 2025-12-16 08:55:06,850 | INFO     | 
[2025-12-16 00:55:37] 2025-12-16 08:55:06,851 | INFO     | architecture information:
[2025-12-16 00:55:37] 2025-12-16 08:55:06,855 | INFO     | executing command: cat /etc/os-release
[2025-12-16 00:55:37] 2025-12-16 08:55:06,873 | INFO     | cat /etc/os-release:
[2025-12-16 00:55:37] NAME="CentOS Linux"
[2025-12-16 00:55:37] VERSION="7 (Core)"
[2025-12-16 00:55:37] ID="centos"
[2025-12-16 00:55:37] ID_LIKE="rhel fedora"
[2025-12-16 00:55:37] VERSION_ID="7"
[2025-12-16 00:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 00:55:37] ANSI_COLOR="0;31"
[2025-12-16 00:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 00:55:37] HOME_URL="https://www.centos.org/"
[2025-12-16 00:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 00:55:37] 
[2025-12-16 00:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 00:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 00:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 00:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 00:55:37] 
[2025-12-16 00:55:37] 2025-12-16 08:55:06,873 | INFO     | ***************************************
[2025-12-16 00:55:37] 2025-12-16 08:55:07,376 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc569/slots/4
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | INFO     | sufficient remaining disk space (107646812160 B)
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | INFO     | update_server=False
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 00:55:37] 2025-12-16 08:55:07,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 00:55:37] 2025-12-16 08:55:07,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:55:37] 2025-12-16 08:55:07,423 | INFO     | aborting loop
[2025-12-16 00:55:37] 2025-12-16 08:55:07,771 | INFO     | all data control threads have been joined
[2025-12-16 00:55:37] 2025-12-16 08:55:08,290 | INFO     | all payload control threads have been joined
[2025-12-16 00:55:37] 2025-12-16 08:55:08,397 | INFO     | [job] retrieve thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,418 | INFO     | [payload] failed_post thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,423 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,428 | INFO     | [job] job monitor thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,732 | INFO     | all job control threads have been joined
[2025-12-16 00:55:37] 2025-12-16 08:55:08,776 | INFO     | [data] control thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:08,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 00:55:37] 2025-12-16 08:55:09,088 | INFO     | [job] validate thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,099 | INFO     | [data] copytool_in thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,295 | INFO     | [payload] control thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,306 | INFO     | [payload] validate_post thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,397 | INFO     | [data] copytool_out thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 00:55:37] 2025-12-16 08:55:09,653 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,689 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:09,737 | INFO     | [job] control thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:10,657 | INFO     | [job] queue monitor thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:12,785 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 00:55:37] 2025-12-16 08:55:27,429 | INFO     | [monitor] cgroup control has ended
[2025-12-16 00:55:37] 2025-12-16 08:55:29,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132025911338816)>', '<ExcThread(monitor, started 132025147193088)>']
[2025-12-16 00:55:37] 2025-12-16 08:55:34,382 | INFO     | all workflow threads have been joined
[2025-12-16 00:55:37] 2025-12-16 08:55:34,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 00:55:37] 2025-12-16 08:55:34,382 | INFO     | traces error code: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:34,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | INFO     | PID=418403 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | INFO     | .. there are 20 such processes running
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 00:55:37] 2025-12-16 08:55:36,861 | INFO     | [monitor] control thread has ended
[2025-12-16 00:55:37] 2025-12-16 08:55:37,046 [wrapper] ==== pilot stdout END ====
[2025-12-16 00:55:37] 2025-12-16 08:55:37,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 00:55:37] 2025-12-16 08:55:37,059 [wrapper] pilotpid: 418403
[2025-12-16 00:55:37] 2025-12-16 08:55:37,065 [wrapper] Pilot exit status: 0
[2025-12-16 00:55:37] 2025-12-16 08:55:37,079 [wrapper] pandaids: 6929301249
[2025-12-16 00:55:37] 2025-12-16 08:55:37,143 [wrapper] cleanup supervisor_pilot 1352198 418404
[2025-12-16 00:55:37] 2025-12-16 08:55:37,145 [wrapper] Test setup, not cleaning
[2025-12-16 00:55:37] 2025-12-16 08:55:37,146 [wrapper] apfmon messages muted
[2025-12-16 00:55:37] 2025-12-16 08:55:37,148 [wrapper] ==== wrapper stdout END ====
[2025-12-16 00:55:37] 2025-12-16 08:55:37,151 [wrapper] ==== wrapper stderr END ====
[2025-12-16 00:55:37]  *** Error codes and diagnostics ***
[2025-12-16 00:55:37]     "exeErrorCode": 0,
[2025-12-16 00:55:37]     "exeErrorDiag": "",
[2025-12-16 00:55:37]     "pilotErrorCode": 0,
[2025-12-16 00:55:37]     "pilotErrorDiag": "",
[2025-12-16 00:55:37]  *** Listing of results directory ***
[2025-12-16 00:55:37] total 453072
[2025-12-16 00:55:37] -rw-r--r-- 1 root root    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-16 00:55:37] -rw-r--r-- 1 root root      5112 Dec 13 03:36 queuedata.json
[2025-12-16 00:55:37] -rwx------ 1 4871 1028     36322 Dec 13 03:36 runpilot2-wrapper.sh
[2025-12-16 00:55:37] -rw-r--r-- 1 root root       100 Dec 15 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 00:55:37] -rwxr-xr-x 1 root root      7986 Dec 15 18:51 run_atlas
[2025-12-16 00:55:37] -rw-r--r-- 1 root root       105 Dec 15 18:51 job.xml
[2025-12-16 00:55:37] -rw-r--r-- 1 root root      7068 Dec 15 18:51 init_data.xml
[2025-12-16 00:55:37] -rw-r--r-- 2 root root 225640746 Dec 15 18:51 EVNT.47898761._000222.pool.root.1
[2025-12-16 00:55:37] -rw-r--r-- 2 root root     15847 Dec 15 18:51 start_atlas.sh
[2025-12-16 00:55:37] drwxrwx--x 2 root root      4096 Dec 15 18:51 shared
[2025-12-16 00:55:37] -rw-r--r-- 2 root root    592389 Dec 15 18:51 input.tar.gz
[2025-12-16 00:55:37] -rw-r--r-- 1 root root         0 Dec 15 18:51 boinc_lockfile
[2025-12-16 00:55:37] -rw-r--r-- 1 root root      2504 Dec 15 18:51 pandaJob.out
[2025-12-16 00:55:37] -rw------- 1 root root    994523 Dec 15 18:51 agis_schedconf.cvmfs.json
[2025-12-16 00:55:37] drwxr-xr-x 5  320  320      4096 Dec 15 18:51 pilot3
[2025-12-16 00:55:37] -rw-r--r-- 1 root root       531 Dec 16 00:54 boinc_task_state.xml
[2025-12-16 00:55:37] -rw------- 1 root root 227028703 Dec 16 00:54 HITS.47898763._003671.pool.root.1
[2025-12-16 00:55:37] -rw------- 1 root root      1055 Dec 16 00:54 memory_monitor_summary.json
[2025-12-16 00:55:37] -rw------- 1 root root   1516240 Dec 16 00:54 agis_ddmendpoints.agis.ALL.json
[2025-12-16 00:55:37] -rw------- 1 root root    636568 Dec 16 00:54 log.47898763._003671.job.log.tgz.1
[2025-12-16 00:55:37] -rw------- 1 root root        95 Dec 16 00:54 pilot_heartbeat.json
[2025-12-16 00:55:37] -rw------- 1 root root      7781 Dec 16 00:55 heartbeat.json
[2025-12-16 00:55:37] -rw-r--r-- 1 root root      8192 Dec 16 00:55 boinc_mmap_file
[2025-12-16 00:55:37] -rw-r--r-- 1 root root        28 Dec 16 00:55 wrapper_checkpoint.txt
[2025-12-16 00:55:37] -rw------- 1 root root       822 Dec 16 00:55 pilotlog.txt
[2025-12-16 00:55:37] -rw------- 1 root root   3044486 Dec 16 00:55 log.47898763._003671.job.log.1
[2025-12-16 00:55:37] -rw------- 1 root root       357 Dec 16 00:55 output.list
[2025-12-16 00:55:37] -rw-r--r-- 1 root root       620 Dec 16 00:55 runtime_log
[2025-12-16 00:55:37] -rw------- 1 root root   3696640 Dec 16 00:55 result.tar.gz
[2025-12-16 00:55:37] -rw-r--r-- 1 root root      9021 Dec 16 00:55 runtime_log.err
[2025-12-16 00:55:37] -rw------- 1 root root       658 Dec 16 00:55 3yeNDmc6co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL6OKDmd22kLo.diag
[2025-12-16 00:55:37] -rw-r--r-- 1 root root     21532 Dec 16 00:55 stderr.txt
[2025-12-16 00:55:37] HITS file was successfully produced:
[2025-12-16 00:55:37] -rw------- 1 root root 227028703 Dec 16 00:54 shared/HITS.pool.root.1
[2025-12-16 00:55:37]  *** Contents of shared directory: ***
[2025-12-16 00:55:37] total 446280
[2025-12-16 00:55:37] -rw-r--r-- 2 root root 225640746 Dec 15 18:51 ATLAS.root_0
[2025-12-16 00:55:37] -rw-r--r-- 2 root root     15847 Dec 15 18:51 start_atlas.sh
[2025-12-16 00:55:37] -rw-r--r-- 2 root root    592389 Dec 15 18:51 input.tar.gz
[2025-12-16 00:55:37] -rw------- 1 root root 227028703 Dec 16 00:54 HITS.pool.root.1
[2025-12-16 00:55:37] -rw------- 1 root root   3696640 Dec 16 00:55 result.tar.gz
00:55:38 (414511): run_atlas exited; CPU time 33960.245526
00:55:38 (414511): called boinc_finish(0)

</stderr_txt>
]]>

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