Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:51:30 (254045): wrapper (7.7.26015): starting
17:51:30 (254045): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 17:51:30] Arguments: --nthreads 12
[2025-12-15 17:51:30] Threads: 12
[2025-12-15 17:51:30] Checking for CVMFS
[2025-12-15 17:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 17:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 17:51:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 17:51:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 17:51:30] 2.13.3.0 11319 13607 54756 154053 0 188 2218267 4096000 17425 130560 0 2270338409 100.000 1169825 529 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-15 17:51:30] CVMFS is ok
[2025-12-15 17:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 17:51:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-15 17:51:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-15 17:51:30] Further information can be found at the LHC@home message board.
[2025-12-15 17:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 17:51:30] Checking for apptainer binary...
[2025-12-15 17:51:30] apptainer is not installed, using version from CVMFS
[2025-12-15 17:51:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 17:51:31] 7950x-linux
[2025-12-15 17:51:31] apptainer works
[2025-12-15 17:51:31] Set ATHENA_PROC_NUMBER=12
[2025-12-15 17:51:31] Set ATHENA_CORE_NUMBER=12
[2025-12-15 17:51:31] Starting ATLAS job with PandaID=6929300529
[2025-12-15 17:51:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc569/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 23:46:27]  *** The last 200 lines of the pilot log: ***
[2025-12-15 23:46:27] 2025-12-16 07:45:25,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,233 | INFO     | time since job start (21221s) is within the limit (174528.0s)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,906 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 23:46:27] 2025-12-16 07:45:27,909 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.98965625
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | INFO     | using path: /var/lib/multiboinc/boinc569/slots/0/PanDA_Pilot-6929300529/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | INFO     | extracted standard info from prmon json
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 23:46:27] 2025-12-16 07:45:27,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 23:46:27] 2025-12-16 07:45:27,916 | INFO     | fitting pss+swap vs Time
[2025-12-15 23:46:27] 2025-12-16 07:45:27,917 | INFO     | sum of square deviations: 13068103627.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,918 | INFO     | sum of deviations: 33307201486.500004
[2025-12-15 23:46:27] 2025-12-16 07:45:27,918 | INFO     | mean x: 1765860523.5
[2025-12-15 23:46:27] 2025-12-16 07:45:27,918 | INFO     | mean y: 2643154.7040229887
[2025-12-15 23:46:27] 2025-12-16 07:45:27,918 | INFO     | intersect: -4498076607.8598
[2025-12-15 23:46:27] 2025-12-16 07:45:27,919 | INFO     | chi2: 1.8930929947560142
[2025-12-15 23:46:27] 2025-12-16 07:45:27,919 | INFO     | sum of square deviations: 12512874612.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | sum of deviations: 56035171936.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | mean x: 1765860371.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | mean y: 2649322.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | intersect: -7905228969.1369705
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | chi2: 1.1825822675090385
[2025-12-15 23:46:27] 2025-12-16 07:45:27,922 | INFO     | current chi2=1.1825822675090385 (change=37.53173928671939 %)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,923 | INFO     | sum of square deviations: 11973599384.5
[2025-12-15 23:46:27] 2025-12-16 07:45:27,925 | INFO     | sum of deviations: 54863988405.99999
[2025-12-15 23:46:27] 2025-12-16 07:45:27,925 | INFO     | mean x: 1765860218.5
[2025-12-15 23:46:27] 2025-12-16 07:45:27,925 | INFO     | mean y: 2648990.7869822485
[2025-12-15 23:46:27] 2025-12-16 07:45:27,925 | INFO     | intersect: -8088663524.630558
[2025-12-15 23:46:27] 2025-12-16 07:45:27,926 | INFO     | chi2: 1.1827849942478823
[2025-12-15 23:46:27] 2025-12-16 07:45:27,926 | INFO     | current chi2=1.1827849942478823 (change=-0.017142717628501596 %)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,926 | INFO     | right removable region: 337
[2025-12-15 23:46:27] 2025-12-16 07:45:27,926 | INFO     | sum of square deviations: 12512874612.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,928 | INFO     | sum of deviations: -12725067626.000004
[2025-12-15 23:46:27] 2025-12-16 07:45:27,928 | INFO     | mean x: 1765860676.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,928 | INFO     | mean y: 2655703.04664723
[2025-12-15 23:46:27] 2025-12-16 07:45:27,929 | INFO     | intersect: 1798461800.1240056
[2025-12-15 23:46:27] 2025-12-16 07:45:27,929 | INFO     | chi2: 0.7379763056402674
[2025-12-15 23:46:27] 2025-12-16 07:45:27,929 | INFO     | current chi2=0.7379763056402674 (change=61.01742979956569 %)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,929 | INFO     | sum of square deviations: 11973599384.5
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | sum of deviations: -11343876834.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | mean x: 1765860828.5
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | mean y: 2655311.2130177515
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | intersect: 1675644952.942683
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | chi2: 0.7374669270195118
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | current chi2=0.7374669270195118 (change=0.06902370941485472 %)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | left removable region: 20
[2025-12-15 23:46:27] 2025-12-16 07:45:27,932 | INFO     | sum of square deviations: 9877610318.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,934 | INFO     | sum of deviations: 17391328506.000004
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | mean x: 1765860798.0
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | mean y: 2659560.6719242902
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | intersect: -3106459370.44456
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | chi2: 0.008344069627029221
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | current memory leak: 1.76 B/s (using 317 data points, chi2=0.01)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | could have reported an average CPU frequency of 3999 MHz (15 samples)
[2025-12-15 23:46:27] 2025-12-16 07:45:27,935 | INFO     | ..............................
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . Timing measurements:
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . get job = 0 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . initial setup = 3 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . payload setup = 8 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . stage-in = 0 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . payload execution = 21181 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . stage-out = 2 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | . log creation = 0 s
[2025-12-15 23:46:27] 2025-12-16 07:45:27,936 | INFO     | ..............................
[2025-12-15 23:46:27] 2025-12-16 07:45:28,000 | INFO     | 
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | job summary report
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | --------------------------------------------------
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | PanDA job id: 6929300529
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | task id: 47898763
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | errors: (none)
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | pilot state: finished 
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | transexitcode: 0
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | exeerrorcode: 0
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | exeerrordiag: 
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | exitcode: 0
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | exitmsg: OK
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | cpuconsumptiontime: 32821 s
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | nevents: 400
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | neventsw: 0
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | pid: 264602
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | pgrp: 264602
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | corecount: 12
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | event service: False
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | sizes: {0: 2283966, 7: 2284228, 11: 2284256, 21194: 2317979, 21197: 2327061, 21203: 2327199}
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | --------------------------------------------------
[2025-12-15 23:46:27] 2025-12-16 07:45:28,001 | INFO     | 
[2025-12-15 23:46:27] 2025-12-16 07:45:28,002 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc569/slots/0
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | job 6929300529 has completed (purged errors)
[2025-12-15 23:46:27] 2025-12-16 07:45:28,020 | INFO     | overall cleanup function is called
[2025-12-15 23:46:27] 2025-12-16 07:45:29,028 | INFO     | --- collectZombieJob: --- 10, [264602]
[2025-12-15 23:46:27] 2025-12-16 07:45:29,028 | INFO     | zombie collector waiting for pid 264602
[2025-12-15 23:46:27] 2025-12-16 07:45:29,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 23:46:27] 2025-12-16 07:45:29,028 | INFO     | collected zombie processes
[2025-12-15 23:46:27] 2025-12-16 07:45:29,028 | INFO     | will attempt to kill all subprocesses of pid=264602
[2025-12-15 23:46:27] 2025-12-16 07:45:29,386 | INFO     | process IDs to be killed: [264602] (in reverse order)
[2025-12-15 23:46:27] 2025-12-16 07:45:29,548 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 23:46:27] 2025-12-16 07:45:29,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 23:46:27] 2025-12-16 07:45:29,555 | INFO     | did not find any defunct processes belonging to 264602
[2025-12-15 23:46:27] 2025-12-16 07:45:29,563 | INFO     | did not find any defunct processes belonging to 264602
[2025-12-15 23:46:27] 2025-12-16 07:45:29,564 | INFO     | ready for new job
[2025-12-15 23:46:27] 2025-12-16 07:45:29,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 23:46:27] 2025-12-16 07:45:29,566 | INFO     | ***************************************
[2025-12-15 23:46:27] 2025-12-16 07:45:29,566 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 23:46:27] 2025-12-16 07:45:29,566 | INFO     | ***************************************
[2025-12-15 23:46:27] 2025-12-16 07:45:29,566 | INFO     | 
[2025-12-15 23:46:27] 2025-12-16 07:45:29,568 | INFO     | architecture information:
[2025-12-15 23:46:27] 2025-12-16 07:45:29,568 | INFO     | executing command: cat /etc/os-release
[2025-12-15 23:46:27] 2025-12-16 07:45:29,585 | INFO     | cat /etc/os-release:
[2025-12-15 23:46:27] NAME="CentOS Linux"
[2025-12-15 23:46:27] VERSION="7 (Core)"
[2025-12-15 23:46:27] ID="centos"
[2025-12-15 23:46:27] ID_LIKE="rhel fedora"
[2025-12-15 23:46:27] VERSION_ID="7"
[2025-12-15 23:46:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 23:46:27] ANSI_COLOR="0;31"
[2025-12-15 23:46:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 23:46:27] HOME_URL="https://www.centos.org/"
[2025-12-15 23:46:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 23:46:27] 
[2025-12-15 23:46:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 23:46:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 23:46:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 23:46:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 23:46:27] 
[2025-12-15 23:46:27] 2025-12-16 07:45:29,586 | INFO     | ***************************************
[2025-12-15 23:46:27] 2025-12-16 07:45:30,088 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc569/slots/0
[2025-12-15 23:46:27] 2025-12-16 07:45:30,103 | INFO     | sufficient remaining disk space (106381180928 B)
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | INFO     | update_server=False
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | INFO     | aborting loop
[2025-12-15 23:46:27] 2025-12-16 07:45:30,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 23:46:27] 2025-12-16 07:45:30,117 | INFO     | all payload control threads have been joined
[2025-12-15 23:46:27] 2025-12-16 07:45:31,011 | INFO     | all data control threads have been joined
[2025-12-15 23:46:27] 2025-12-16 07:45:31,019 | INFO     | all job control threads have been joined
[2025-12-15 23:46:27] 2025-12-16 07:45:31,109 | INFO     | [job] retrieve thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,109 | INFO     | [job] job monitor thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,122 | INFO     | [payload] control thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,130 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,279 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,433 | INFO     | [data] copytool_in thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:31,760 | INFO     | [payload] failed_post thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,016 | INFO     | [data] control thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,024 | INFO     | [job] control thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,107 | INFO     | [payload] validate_post thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,109 | INFO     | [data] copytool_out thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,301 | INFO     | [job] validate thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,390 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,395 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:32,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 23:46:27] 2025-12-16 07:45:33,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 23:46:27] 2025-12-16 07:45:34,018 | INFO     | [job] queue monitor thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:45:36,540 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 23:46:27] 2025-12-16 07:46:00,539 | INFO     | PID=257936 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-15 23:46:27] 2025-12-16 07:46:00,539 | INFO     | .. there are 20 such processes running
[2025-12-15 23:46:27] 2025-12-16 07:46:00,539 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 23:46:27] 2025-12-16 07:46:00,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 23:46:27] 2025-12-16 07:46:00,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 23:46:27] 2025-12-16 07:46:21,188 | INFO     | [monitor] cgroup control has ended
[2025-12-15 23:46:27] 2025-12-16 07:46:22,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130312034510656)>', '<ExcThread(monitor, started 130311690106624)>']
[2025-12-15 23:46:27] 2025-12-16 07:46:22,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 23:46:27] 2025-12-16 07:46:22,656 | INFO     | [monitor] control thread has ended
[2025-12-15 23:46:27] 2025-12-16 07:46:27,160 | INFO     | all workflow threads have been joined
[2025-12-15 23:46:27] 2025-12-16 07:46:27,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 23:46:27] 2025-12-16 07:46:27,160 | INFO     | traces error code: 0
[2025-12-15 23:46:27] 2025-12-16 07:46:27,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 23:46:27] 2025-12-16 07:46:27,289 [wrapper] ==== pilot stdout END ====
[2025-12-15 23:46:27] 2025-12-16 07:46:27,334 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 23:46:27] 2025-12-16 07:46:27,348 [wrapper] pilotpid: 257936
[2025-12-15 23:46:27] 2025-12-16 07:46:27,349 [wrapper] Pilot exit status: 0
[2025-12-15 23:46:27] 2025-12-16 07:46:27,359 [wrapper] pandaids: 6929300529
[2025-12-15 23:46:27] 2025-12-16 07:46:27,409 [wrapper] cleanup supervisor_pilot 1151399 257937
[2025-12-15 23:46:27] 2025-12-16 07:46:27,411 [wrapper] Test setup, not cleaning
[2025-12-15 23:46:27] 2025-12-16 07:46:27,415 [wrapper] apfmon messages muted
[2025-12-15 23:46:27] 2025-12-16 07:46:27,424 [wrapper] ==== wrapper stdout END ====
[2025-12-15 23:46:27] 2025-12-16 07:46:27,425 [wrapper] ==== wrapper stderr END ====
[2025-12-15 23:46:27]  *** Error codes and diagnostics ***
[2025-12-15 23:46:27]     "exeErrorCode": 0,
[2025-12-15 23:46:27]     "exeErrorDiag": "",
[2025-12-15 23:46:27]     "pilotErrorCode": 0,
[2025-12-15 23:46:27]     "pilotErrorDiag": "",
[2025-12-15 23:46:27]  *** Listing of results directory ***
[2025-12-15 23:46:27] total 439644
[2025-12-15 23:46:27] -rw-r--r-- 1 root root    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-15 23:46:27] -rwx------ 1 4871 1028     36322 Dec 13 03:36 runpilot2-wrapper.sh
[2025-12-15 23:46:27] -rw-r--r-- 1 root root      5112 Dec 13 03:36 queuedata.json
[2025-12-15 23:46:27] -rw-r--r-- 1 root root       100 Dec 15 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 23:46:27] -rwxr-xr-x 1 root root      7986 Dec 15 17:51 run_atlas
[2025-12-15 23:46:27] -rw-r--r-- 1 root root       105 Dec 15 17:51 job.xml
[2025-12-15 23:46:27] -rw-r--r-- 2 root root 221735551 Dec 15 17:51 EVNT.47898761._000195.pool.root.1
[2025-12-15 23:46:27] -rw-r--r-- 2 root root     15847 Dec 15 17:51 start_atlas.sh
[2025-12-15 23:46:27] drwxrwx--x 2 root root      4096 Dec 15 17:51 shared
[2025-12-15 23:46:27] -rw-r--r-- 2 root root    592395 Dec 15 17:51 input.tar.gz
[2025-12-15 23:46:27] -rw-r--r-- 1 root root         0 Dec 15 17:51 boinc_lockfile
[2025-12-15 23:46:27] -rw-r--r-- 1 root root      2504 Dec 15 17:51 pandaJob.out
[2025-12-15 23:46:27] -rw------- 1 root root    994531 Dec 15 17:51 agis_schedconf.cvmfs.json
[2025-12-15 23:46:27] drwxr-xr-x 5  320  320      4096 Dec 15 17:51 pilot3
[2025-12-15 23:46:27] -rw-r--r-- 1 root root      7074 Dec 15 18:51 init_data.xml
[2025-12-15 23:46:27] -rw------- 1 root root 217374171 Dec 15 23:44 HITS.47898763._002986.pool.root.1
[2025-12-15 23:46:27] -rw-r--r-- 1 root root       530 Dec 15 23:45 boinc_task_state.xml
[2025-12-15 23:46:27] -rw------- 1 root root      1037 Dec 15 23:45 memory_monitor_summary.json
[2025-12-15 23:46:27] -rw------- 1 root root        95 Dec 15 23:45 pilot_heartbeat.json
[2025-12-15 23:46:27] -rw------- 1 root root   1516240 Dec 15 23:45 agis_ddmendpoints.agis.ALL.json
[2025-12-15 23:46:27] -rw------- 1 root root    616653 Dec 15 23:45 log.47898763._002986.job.log.tgz.1
[2025-12-15 23:46:27] -rw------- 1 root root      7764 Dec 15 23:45 heartbeat.json
[2025-12-15 23:46:27] -rw-r--r-- 1 root root      8192 Dec 15 23:46 boinc_mmap_file
[2025-12-15 23:46:27] -rw-r--r-- 1 root root        28 Dec 15 23:46 wrapper_checkpoint.txt
[2025-12-15 23:46:27] -rw------- 1 root root      4838 Dec 15 23:46 pilotlog.txt
[2025-12-15 23:46:27] -rw------- 1 root root   2966618 Dec 15 23:46 log.47898763._002986.job.log.1
[2025-12-15 23:46:27] -rw------- 1 root root       357 Dec 15 23:46 output.list
[2025-12-15 23:46:27] -rw-r--r-- 1 root root       620 Dec 15 23:46 runtime_log
[2025-12-15 23:46:27] -rw------- 1 root root   3604480 Dec 15 23:46 result.tar.gz
[2025-12-15 23:46:27] -rw-r--r-- 1 root root      9021 Dec 15 23:46 runtime_log.err
[2025-12-15 23:46:27] -rw------- 1 root root       658 Dec 15 23:46 BDiMDm25co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcATKDmbMUMjm.diag
[2025-12-15 23:46:27] -rw-r--r-- 1 root root     21226 Dec 15 23:46 stderr.txt
[2025-12-15 23:46:27] HITS file was successfully produced:
[2025-12-15 23:46:27] -rw------- 1 root root 217374171 Dec 15 23:44 shared/HITS.pool.root.1
[2025-12-15 23:46:27]  *** Contents of shared directory: ***
[2025-12-15 23:46:27] total 432944
[2025-12-15 23:46:27] -rw-r--r-- 2 root root 221735551 Dec 15 17:51 ATLAS.root_0
[2025-12-15 23:46:27] -rw-r--r-- 2 root root     15847 Dec 15 17:51 start_atlas.sh
[2025-12-15 23:46:27] -rw-r--r-- 2 root root    592395 Dec 15 17:51 input.tar.gz
[2025-12-15 23:46:27] -rw------- 1 root root 217374171 Dec 15 23:44 HITS.pool.root.1
[2025-12-15 23:46:27] -rw------- 1 root root   3604480 Dec 15 23:46 result.tar.gz
23:46:28 (254045): run_atlas exited; CPU time 33217.608607
23:46:28 (254045): called boinc_finish(0)

</stderr_txt>
]]>

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