Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
23:55:33 (1221489): wrapper (7.7.26015): starting
23:55:33 (1221489): wrapper: running run_atlas (--nthreads 12)
[2025-12-15 23:55:33] Arguments: --nthreads 12
[2025-12-15 23:55:33] Threads: 12
[2025-12-15 23:55:33] Checking for CVMFS
[2025-12-15 23:55:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 23:55:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 23:55:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 23:55:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 23:55:33] 2.13.3.0 11319 13971 59256 154063 0 236 3136194 4096001 17528 130560 0 2350127321 99.999 1503305 526 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-15 23:55:33] CVMFS is ok
[2025-12-15 23:55:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 23:55:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-15 23:55:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-15 23:55:33] Further information can be found at the LHC@home message board.
[2025-12-15 23:55:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 23:55:33] Checking for apptainer binary...
[2025-12-15 23:55:33] apptainer is not installed, using version from CVMFS
[2025-12-15 23:55:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 23:55:33] 7950x-linux
[2025-12-15 23:55:33] apptainer works
[2025-12-15 23:55:33] Set ATHENA_PROC_NUMBER=12
[2025-12-15 23:55:33] Set ATHENA_CORE_NUMBER=12
[2025-12-15 23:55:33] Starting ATLAS job with PandaID=6929300738
[2025-12-15 23:55:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc569/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 05:52:43]  *** The last 200 lines of the pilot log: ***
[2025-12-16 05:52:43] 2025-12-16 13:52:05,325 | INFO     | time since job start (21373s) is within the limit (174528.0s)
[2025-12-16 05:52:43] 2025-12-16 13:52:05,685 | INFO     | monitor loop #1528: job 0:6929300738 is in state 'finished'
[2025-12-16 05:52:43] 2025-12-16 13:52:05,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:52:43] 2025-12-16 13:52:07,330 | INFO     | time since job start (21375s) is within the limit (174528.0s)
[2025-12-16 05:52:43] 2025-12-16 13:52:08,188 | INFO     | monitor loop #1529: job 0:6929300738 is in state 'finished'
[2025-12-16 05:52:43] 2025-12-16 13:52:08,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:52:43] 2025-12-16 13:52:09,335 | INFO     | time since job start (21377s) is within the limit (174528.0s)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,542 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 05:52:43] 2025-12-16 13:52:10,544 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9960312500007
[2025-12-16 05:52:43] 2025-12-16 13:52:10,550 | INFO     | using path: /var/lib/multiboinc/boinc569/slots/1/PanDA_Pilot-6929300738/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,551 | INFO     | extracted standard info from prmon json
[2025-12-16 05:52:43] 2025-12-16 13:52:10,551 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:52:43] 2025-12-16 13:52:10,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:52:43] 2025-12-16 13:52:10,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:52:43] 2025-12-16 13:52:10,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:52:43] 2025-12-16 13:52:10,555 | INFO     | fitting pss+swap vs Time
[2025-12-16 05:52:43] 2025-12-16 13:52:10,556 | INFO     | sum of square deviations: 13294714387.5
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | sum of deviations: 61675034814.5
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | mean x: 1765882431.5
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | mean y: 2646007.1285714284
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | intersect: -8189396128.314138
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | chi2: 1.1736650363449799
[2025-12-16 05:52:43] 2025-12-16 13:52:10,558 | INFO     | sum of square deviations: 12733038740.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | sum of deviations: 60482913797.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | mean x: 1765882279.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | mean y: 2645683.504347826
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | intersect: -8385431022.873984
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | chi2: 1.1738124723416044
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | current chi2=1.1738124723416044 (change=-0.0125620165940721 %)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,567 | INFO     | right removable region: 344
[2025-12-16 05:52:43] 2025-12-16 13:52:10,568 | INFO     | sum of square deviations: 12733038740.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,569 | INFO     | sum of deviations: 15472446443.000006
[2025-12-16 05:52:43] 2025-12-16 13:52:10,569 | INFO     | mean x: 1765882584.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,569 | INFO     | mean y: 2658457.1275362317
[2025-12-16 05:52:43] 2025-12-16 13:52:10,569 | INFO     | intersect: -2143139122.1835637
[2025-12-16 05:52:43] 2025-12-16 13:52:10,570 | INFO     | chi2: 0.013956813160213258
[2025-12-16 05:52:43] 2025-12-16 13:52:10,570 | INFO     | current chi2=0.013956813160213258 (change=98.81083505702125 %)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,573 | INFO     | sum of square deviations: 12187409905.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | sum of deviations: 16612194019.50001
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | mean x: 1765882736.5
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | mean y: 2658137.344117647
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | intersect: -2404349328.8106537
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | chi2: 0.013011617357227443
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | current chi2=0.013011617357227443 (change=6.77228957739642 %)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | left removable region: 20
[2025-12-16 05:52:43] 2025-12-16 13:52:10,575 | INFO     | sum of square deviations: 10546523325.0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | sum of deviations: 22945793458.499977
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | mean x: 1765882858.5
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | mean y: 2655840.2932098764
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | intersect: -3839329057.8956475
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | chi2: 0.0018323065856467348
[2025-12-16 05:52:43] 2025-12-16 13:52:10,582 | INFO     | current memory leak: 2.18 B/s (using 324 data points, chi2=0.00)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | could have reported an average CPU frequency of 3999 MHz (15 samples)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | ..............................
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . Timing measurements:
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . get job = 0 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . initial setup = 3 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . payload setup = 9 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . stage-in = 0 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . payload execution = 21335 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . stage-out = 2 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | . log creation = 0 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,583 | INFO     | ..............................
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | 
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | job summary report
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | --------------------------------------------------
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | PanDA job id: 6929300738
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | task id: 47898763
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | errors: (none)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | pilot state: finished 
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | transexitcode: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | exeerrorcode: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | exeerrordiag: 
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | exitcode: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | exitmsg: OK
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | cpuconsumptiontime: 33111 s
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | nevents: 400
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | neventsw: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | pid: 1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | pgrp: 1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | corecount: 12
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | event service: False
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | sizes: {0: 2283966, 7: 2284228, 11: 2284256, 21348: 2317836, 21351: 2326862, 21354: 2326918, 21360: 2327240}
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | --------------------------------------------------
[2025-12-16 05:52:43] 2025-12-16 13:52:10,633 | INFO     | 
[2025-12-16 05:52:43] 2025-12-16 13:52:10,634 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc569/slots/1
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | job 6929300738 has completed (purged errors)
[2025-12-16 05:52:43] 2025-12-16 13:52:10,657 | INFO     | overall cleanup function is called
[2025-12-16 05:52:43] 2025-12-16 13:52:11,664 | INFO     | --- collectZombieJob: --- 10, [1232041]
[2025-12-16 05:52:43] 2025-12-16 13:52:11,664 | INFO     | zombie collector waiting for pid 1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:11,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 05:52:43] 2025-12-16 13:52:11,664 | INFO     | collected zombie processes
[2025-12-16 05:52:43] 2025-12-16 13:52:11,664 | INFO     | will attempt to kill all subprocesses of pid=1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:12,065 | INFO     | process IDs to be killed: [1232041] (in reverse order)
[2025-12-16 05:52:43] 2025-12-16 13:52:12,222 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 05:52:43] 2025-12-16 13:52:12,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 05:52:43] 2025-12-16 13:52:12,228 | INFO     | did not find any defunct processes belonging to 1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:12,234 | INFO     | did not find any defunct processes belonging to 1232041
[2025-12-16 05:52:43] 2025-12-16 13:52:12,234 | INFO     | ready for new job
[2025-12-16 05:52:43] 2025-12-16 13:52:12,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 05:52:43] 2025-12-16 13:52:12,238 | INFO     | ***************************************
[2025-12-16 05:52:43] 2025-12-16 13:52:12,238 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 05:52:43] 2025-12-16 13:52:12,238 | INFO     | ***************************************
[2025-12-16 05:52:43] 2025-12-16 13:52:12,238 | INFO     | 
[2025-12-16 05:52:43] 2025-12-16 13:52:12,239 | INFO     | architecture information:
[2025-12-16 05:52:43] 2025-12-16 13:52:12,239 | INFO     | executing command: cat /etc/os-release
[2025-12-16 05:52:43] 2025-12-16 13:52:12,275 | INFO     | cat /etc/os-release:
[2025-12-16 05:52:43] NAME="CentOS Linux"
[2025-12-16 05:52:43] VERSION="7 (Core)"
[2025-12-16 05:52:43] ID="centos"
[2025-12-16 05:52:43] ID_LIKE="rhel fedora"
[2025-12-16 05:52:43] VERSION_ID="7"
[2025-12-16 05:52:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 05:52:43] ANSI_COLOR="0;31"
[2025-12-16 05:52:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 05:52:43] HOME_URL="https://www.centos.org/"
[2025-12-16 05:52:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 05:52:43] 
[2025-12-16 05:52:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 05:52:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 05:52:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 05:52:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 05:52:43] 
[2025-12-16 05:52:43] 2025-12-16 13:52:12,275 | INFO     | ***************************************
[2025-12-16 05:52:43] 2025-12-16 13:52:12,777 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc569/slots/1
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | INFO     | sufficient remaining disk space (111706898432 B)
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | INFO     | update_server=False
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 05:52:43] 2025-12-16 13:52:12,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 05:52:43] 2025-12-16 13:52:12,975 | INFO     | all data control threads have been joined
[2025-12-16 05:52:43] 2025-12-16 13:52:13,197 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 05:52:43] 2025-12-16 13:52:13,197 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 05:52:43] 2025-12-16 13:52:13,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:52:43] 2025-12-16 13:52:13,197 | INFO     | will abort loop
[2025-12-16 05:52:43] 2025-12-16 13:52:13,307 | INFO     | all job control threads have been joined
[2025-12-16 05:52:43] 2025-12-16 13:52:13,802 | INFO     | [job] retrieve thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:13,892 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:13,981 | INFO     | [data] control thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,082 | INFO     | all payload control threads have been joined
[2025-12-16 05:52:43] 2025-12-16 13:52:14,202 | INFO     | [job] job monitor thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,241 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,244 | INFO     | [data] copytool_in thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,312 | INFO     | [job] control thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,653 | INFO     | [payload] failed_post thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,690 | INFO     | [job] validate thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,708 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,802 | INFO     | [data] copytool_out thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:14,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 05:52:43] 2025-12-16 13:52:15,087 | INFO     | [payload] control thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:15,352 | INFO     | [payload] validate_post thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:15,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:52:43] 2025-12-16 13:52:16,650 | INFO     | [job] queue monitor thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:18,867 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 05:52:43] 2025-12-16 13:52:27,154 | INFO     | [monitor] cgroup control has ended
[2025-12-16 05:52:43] 2025-12-16 13:52:28,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124884922181440)>', '<ExcThread(monitor, started 124884143298304)>']
[2025-12-16 05:52:43] 2025-12-16 13:52:33,184 | INFO     | all workflow threads have been joined
[2025-12-16 05:52:43] 2025-12-16 13:52:33,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 05:52:43] 2025-12-16 13:52:33,184 | INFO     | traces error code: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:33,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | INFO     | PID=1225328 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | INFO     | .. there are 20 such processes running
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 05:52:43] 2025-12-16 13:52:42,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 05:52:43] 2025-12-16 13:52:42,803 | INFO     | [monitor] control thread has ended
[2025-12-16 05:52:43] 2025-12-16 13:52:42,967 [wrapper] ==== pilot stdout END ====
[2025-12-16 05:52:43] 2025-12-16 13:52:42,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 05:52:43] 2025-12-16 13:52:42,971 [wrapper] pilotpid: 1225328
[2025-12-16 05:52:43] 2025-12-16 13:52:42,973 [wrapper] Pilot exit status: 0
[2025-12-16 05:52:43] 2025-12-16 13:52:43,004 [wrapper] pandaids: 6929300738
[2025-12-16 05:52:43] 2025-12-16 13:52:43,071 [wrapper] cleanup supervisor_pilot 2065426 1225329
[2025-12-16 05:52:43] 2025-12-16 13:52:43,073 [wrapper] Test setup, not cleaning
[2025-12-16 05:52:43] 2025-12-16 13:52:43,075 [wrapper] apfmon messages muted
[2025-12-16 05:52:43] 2025-12-16 13:52:43,077 [wrapper] ==== wrapper stdout END ====
[2025-12-16 05:52:43] 2025-12-16 13:52:43,080 [wrapper] ==== wrapper stderr END ====
[2025-12-16 05:52:43]  *** Error codes and diagnostics ***
[2025-12-16 05:52:43]     "exeErrorCode": 0,
[2025-12-16 05:52:43]     "exeErrorDiag": "",
[2025-12-16 05:52:43]     "pilotErrorCode": 0,
[2025-12-16 05:52:43]     "pilotErrorDiag": "",
[2025-12-16 05:52:43]  *** Listing of results directory ***
[2025-12-16 05:52:43] total 446972
[2025-12-16 05:52:43] -rw-r--r-- 1 root root    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-16 05:52:43] -rwx------ 1 4871 1028     36322 Dec 13 03:36 runpilot2-wrapper.sh
[2025-12-16 05:52:43] -rw-r--r-- 1 root root      5112 Dec 13 03:36 queuedata.json
[2025-12-16 05:52:43] -rw-r--r-- 1 root root       100 Dec 15 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 05:52:43] -rwxr-xr-x 1 root root      7986 Dec 15 23:55 run_atlas
[2025-12-16 05:52:43] -rw-r--r-- 1 root root       105 Dec 15 23:55 job.xml
[2025-12-16 05:52:43] -rw-r--r-- 2 root root 222797378 Dec 15 23:55 EVNT.47898761._000203.pool.root.1
[2025-12-16 05:52:43] -rw-r--r-- 1 root root      7068 Dec 15 23:55 init_data.xml
[2025-12-16 05:52:43] -rw-r--r-- 2 root root     15847 Dec 15 23:55 start_atlas.sh
[2025-12-16 05:52:43] drwxrwx--x 2 root root      4096 Dec 15 23:55 shared
[2025-12-16 05:52:43] -rw-r--r-- 2 root root    592392 Dec 15 23:55 input.tar.gz
[2025-12-16 05:52:43] -rw-r--r-- 1 root root         0 Dec 15 23:55 boinc_lockfile
[2025-12-16 05:52:43] -rw-r--r-- 1 root root      2504 Dec 15 23:55 pandaJob.out
[2025-12-16 05:52:43] -rw------- 1 root root    994531 Dec 15 23:55 agis_schedconf.cvmfs.json
[2025-12-16 05:52:43] drwxr-xr-x 5  320  320      4096 Dec 15 23:55 pilot3
[2025-12-16 05:52:43] -rw------- 1 root root 223769277 Dec 16 05:51 HITS.47898763._003187.pool.root.1
[2025-12-16 05:52:43] -rw-r--r-- 1 root root       531 Dec 16 05:51 boinc_task_state.xml
[2025-12-16 05:52:43] -rw------- 1 root root      1034 Dec 16 05:51 memory_monitor_summary.json
[2025-12-16 05:52:43] -rw------- 1 root root   1516240 Dec 16 05:52 agis_ddmendpoints.agis.ALL.json
[2025-12-16 05:52:43] -rw------- 1 root root    618752 Dec 16 05:52 log.47898763._003187.job.log.tgz.1
[2025-12-16 05:52:43] -rw------- 1 root root      7764 Dec 16 05:52 heartbeat.json
[2025-12-16 05:52:43] -rw-r--r-- 1 root root        28 Dec 16 05:52 wrapper_checkpoint.txt
[2025-12-16 05:52:43] -rw-r--r-- 1 root root      8192 Dec 16 05:52 boinc_mmap_file
[2025-12-16 05:52:43] -rw------- 1 root root       823 Dec 16 05:52 pilotlog.txt
[2025-12-16 05:52:43] -rw------- 1 root root        95 Dec 16 05:52 pilot_heartbeat.json
[2025-12-16 05:52:43] -rw------- 1 root root   2990120 Dec 16 05:52 log.47898763._003187.job.log.1
[2025-12-16 05:52:43] -rw------- 1 root root       357 Dec 16 05:52 output.list
[2025-12-16 05:52:43] -rw-r--r-- 1 root root       620 Dec 16 05:52 runtime_log
[2025-12-16 05:52:43] -rw------- 1 root root   3624960 Dec 16 05:52 result.tar.gz
[2025-12-16 05:52:43] -rw------- 1 root root       657 Dec 16 05:52 t8MODmE6co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1ATKDm27yYJm.diag
[2025-12-16 05:52:43] -rw-r--r-- 1 root root      9021 Dec 16 05:52 runtime_log.err
[2025-12-16 05:52:43] -rw-r--r-- 1 root root     21470 Dec 16 05:52 stderr.txt
[2025-12-16 05:52:43] HITS file was successfully produced:
[2025-12-16 05:52:43] -rw------- 1 root root 223769277 Dec 16 05:51 shared/HITS.pool.root.1
[2025-12-16 05:52:43]  *** Contents of shared directory: ***
[2025-12-16 05:52:43] total 440248
[2025-12-16 05:52:43] -rw-r--r-- 2 root root 222797378 Dec 15 23:55 ATLAS.root_0
[2025-12-16 05:52:43] -rw-r--r-- 2 root root     15847 Dec 15 23:55 start_atlas.sh
[2025-12-16 05:52:43] -rw-r--r-- 2 root root    592392 Dec 15 23:55 input.tar.gz
[2025-12-16 05:52:43] -rw------- 1 root root 223769277 Dec 16 05:51 HITS.pool.root.1
[2025-12-16 05:52:43] -rw------- 1 root root   3624960 Dec 16 05:52 result.tar.gz
05:52:45 (1221489): run_atlas exited; CPU time 33511.181797
05:52:45 (1221489): called boinc_finish(0)

</stderr_txt>
]]>

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