Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:13 (4180198): wrapper (7.7.26015): starting
14:48:13 (4180198): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 14:48:13] Arguments: --nthreads 12
[2025-12-13 14:48:13] Threads: 12
[2025-12-13 14:48:13] Checking for CVMFS
[2025-12-13 14:48:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:48:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:48:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:48:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:48:16] 2.11.5.0 2104101 53465 303080 153975 3 220 33422715 45568000 18142 130560 0 483728026 99.787 319211312 25291 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-13 14:48:16] CVMFS is ok
[2025-12-13 14:48:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:48:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:48:16] Further information can be found at the LHC@home message board.
[2025-12-13 14:48:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:48:16] Checking for apptainer binary...
[2025-12-13 14:48:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:48:16] Running /usr/bin/apptainer --version
[2025-12-13 14:48:16] apptainer version 1.4.1-1.el9
[2025-12-13 14:48:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:48:17] wns0090.triumf.lcg
[2025-12-13 14:48:17] apptainer works
[2025-12-13 14:48:17] Set ATHENA_PROC_NUMBER=12
[2025-12-13 14:48:17] Set ATHENA_CORE_NUMBER=12
[2025-12-13 14:48:17] Starting ATLAS job with PandaID=6929300574
[2025-12-13 14:48:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:56:30]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | WARNING  | wrong length of table data, x=[1765666353.0], y=[1581.0] (must be same and length>=4)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . Timing measurements:
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . get job = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . initial setup = 4 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload setup = 50 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-in = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload execution = 86 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-out = 2 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . log creation = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 14:56:30] 2025-12-13 22:55:54,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929300574/pilotlog.txt
[2025-12-13 14:56:30] 2025-12-13 22:55:54,302 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 14:56:30] - Log from pilotlog.txt -
[2025-12-13 14:56:30] 2025-12-13 22:55:54,160 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929300574/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,161 | INFO     | extracted standard info from prmon json
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | WARNING  | wrong length of table data, x=[1765666353.0], y=[1581.0] (must be same and length>=4)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . Timing measurements:
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . get job = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . initial setup = 4 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload setup = 50 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-in = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload execution = 86 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-out = 2 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . log creation = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 14:56:30] 2025-12-13 22:55:54,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929300574/pilotlog.txt
[2025-12-13 14:56:30] 2025-12-13 22:55:54,303 | WARNING  | 
[2025-12-13 14:56:30] [begin log extracts]
[2025-12-13 14:56:30] - Log from pilotlog.txt -
[2025-12-13 14:56:30] 2025-12-13 22:55:54,160 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929300574/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,161 | INFO     | extracted standard info from prmon json
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 14:56:30] 2025-12-13 22:55:54,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | WARNING  | wrong length of table data, x=[1765666353.0], y=[1581.0] (must be same and length>=4)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . Timing measurements:
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . get job = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,184 | INFO     | . initial setup = 4 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload setup = 50 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-in = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . payload execution = 86 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . stage-out = 2 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | . log creation = 0 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | ..............................
[2025-12-13 14:56:30] 2025-12-13 22:55:54,188 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 14:56:30] 2025-12-13 22:55:54,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929300574/pilotlog.txt
[2025-12-13 14:56:30] [end log extracts]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,303 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,303 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 14:56:30] 2025-12-13 22:55:54,492 | INFO     | 
[2025-12-13 14:56:30] 2025-12-13 22:55:54,492 | INFO     | job summary report
[2025-12-13 14:56:30] 2025-12-13 22:55:54,492 | INFO     | --------------------------------------------------
[2025-12-13 14:56:30] 2025-12-13 22:55:54,492 | INFO     | PanDA job id: 6929300574
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | task id: 47898763
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 14:53:07,087 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | pilot state: failed 
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | transexitcode: 65
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | exeerrorcode: 65
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | exitcode: 65
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | cpuconsumptiontime: 18 s
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | nevents: 0
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | neventsw: 0
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | pid: 4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | pgrp: 4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | corecount: 12
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | event service: False
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | sizes: {0: 2283778, 1: 2283806, 2: 2283977, 13: 2284005, 24: 2284061, 35: 2284089, 46: 2284535, 57: 2284535, 142: 2307925, 143: 2307901, 145: 2312221, 147: 2312529
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | --------------------------------------------------
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | 
[2025-12-13 14:56:30] 2025-12-13 22:55:54,493 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 14:56:30] 2025-12-13 22:55:54,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:56:30] 2025-12-13 22:55:54,590 | INFO     | job 6929300574 has completed (purged errors)
[2025-12-13 14:56:30] 2025-12-13 22:55:54,590 | INFO     | overall cleanup function is called
[2025-12-13 14:56:30] 2025-12-13 22:55:55,602 | INFO     | --- collectZombieJob: --- 10, [4191680]
[2025-12-13 14:56:30] 2025-12-13 22:55:55,602 | INFO     | zombie collector waiting for pid 4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:55,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:56:30] 2025-12-13 22:55:55,602 | INFO     | collected zombie processes
[2025-12-13 14:56:30] 2025-12-13 22:55:55,603 | INFO     | will attempt to kill all subprocesses of pid=4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:56,601 | INFO     | process IDs to be killed: [4191680] (in reverse order)
[2025-12-13 14:56:30] 2025-12-13 22:55:57,103 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:56:30] 2025-12-13 22:55:57,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:56:30] 2025-12-13 22:55:57,134 | INFO     | did not find any defunct processes belonging to 4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:57,158 | INFO     | did not find any defunct processes belonging to 4191680
[2025-12-13 14:56:30] 2025-12-13 22:55:57,159 | INFO     | ready for new job
[2025-12-13 14:56:30] 2025-12-13 22:55:57,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:56:30] 2025-12-13 22:55:57,160 | INFO     | ***************************************
[2025-12-13 14:56:30] 2025-12-13 22:55:57,160 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:56:30] 2025-12-13 22:55:57,160 | INFO     | ***************************************
[2025-12-13 14:56:30] 2025-12-13 22:55:57,160 | INFO     | 
[2025-12-13 14:56:30] 2025-12-13 22:55:57,162 | INFO     | architecture information:
[2025-12-13 14:56:30] 2025-12-13 22:55:57,183 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:56:30] 2025-12-13 22:55:57,233 | INFO     | cat /etc/os-release:
[2025-12-13 14:56:30] NAME="CentOS Linux"
[2025-12-13 14:56:30] VERSION="7 (Core)"
[2025-12-13 14:56:30] ID="centos"
[2025-12-13 14:56:30] ID_LIKE="rhel fedora"
[2025-12-13 14:56:30] VERSION_ID="7"
[2025-12-13 14:56:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:56:30] ANSI_COLOR="0;31"
[2025-12-13 14:56:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:56:30] HOME_URL="https://www.centos.org/"
[2025-12-13 14:56:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:56:30] 
[2025-12-13 14:56:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:56:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:56:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:56:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:56:30] 
[2025-12-13 14:56:30] 2025-12-13 22:55:57,233 | INFO     | ***************************************
[2025-12-13 14:56:30] 2025-12-13 22:55:57,736 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 14:56:30] 2025-12-13 22:55:57,964 | INFO     | sufficient remaining disk space (2138959773696 B)
[2025-12-13 14:56:30] 2025-12-13 22:55:57,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:56:30] 2025-12-13 22:55:57,964 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:56:30] 2025-12-13 22:55:57,964 | INFO     | update_server=False
[2025-12-13 14:56:30] 2025-12-13 22:55:57,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:56:30] 2025-12-13 22:55:57,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:56:30] 2025-12-13 22:55:57,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:56:30] 2025-12-13 22:55:57,967 | INFO     | aborting loop
[2025-12-13 14:56:30] 2025-12-13 22:55:58,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:56:30] 2025-12-13 22:55:58,261 | INFO     | all job control threads have been joined
[2025-12-13 14:56:30] 2025-12-13 22:55:58,537 | INFO     | all data control threads have been joined
[2025-12-13 14:56:30] 2025-12-13 22:55:58,941 | INFO     | all payload control threads have been joined
[2025-12-13 14:56:30] 2025-12-13 22:55:58,970 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:58,972 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,267 | INFO     | [job] control thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,306 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,306 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,316 | INFO     | [job] validate thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:56:30] 2025-12-13 22:55:59,543 | INFO     | [data] control thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,779 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,905 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,954 | INFO     | [payload] control thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,962 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:55:59,973 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:56:00,163 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:56:00,524 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:56:02,070 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:56:30] 2025-12-13 22:56:20,127 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:56:30] 2025-12-13 22:56:20,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370745554752)>', '<ExcThread(monitor, started 140370042144512)>']
[2025-12-13 14:56:30] 2025-12-13 22:56:25,736 | INFO     | all workflow threads have been joined
[2025-12-13 14:56:30] 2025-12-13 22:56:25,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:56:30] 2025-12-13 22:56:25,737 | INFO     | traces error code: 0
[2025-12-13 14:56:30] 2025-12-13 22:56:25,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:56:30] 2025-12-13 22:56:27,488 | INFO     | PID=4184135 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 14:56:30] 2025-12-13 22:56:27,488 | INFO     | .. there are 42 such processes running
[2025-12-13 14:56:30] 2025-12-13 22:56:27,489 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:56:30] 2025-12-13 22:56:27,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:56:30] 2025-12-13 22:56:27,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:56:30] 2025-12-13 22:56:27,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:56:30] 2025-12-13 22:56:27,498 | INFO     | [monitor] control thread has ended
[2025-12-13 14:56:30] 2025-12-13 22:56:28,375 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:56:30] 2025-12-13 22:56:28,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:56:30] 2025-12-13 22:56:28,429 [wrapper] pilotpid: 4184135
[2025-12-13 14:56:30] 2025-12-13 22:56:28,457 [wrapper] Pilot exit status: 0
[2025-12-13 14:56:30] 2025-12-13 22:56:28,651 [wrapper] pandaids: 6929300574
[2025-12-13 14:56:30] 2025-12-13 22:56:29,459 [wrapper] cleanup supervisor_pilot 4184141 4184136
[2025-12-13 14:56:30] 2025-12-13 22:56:29,525 [wrapper] Test setup, not cleaning
[2025-12-13 14:56:30] 2025-12-13 22:56:29,543 [wrapper] apfmon messages muted
[2025-12-13 14:56:30] 2025-12-13 22:56:29,579 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:56:30] 2025-12-13 22:56:29,593 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:56:30]  *** Error codes and diagnostics ***
[2025-12-13 14:56:30]     "exeErrorCode": 65,
[2025-12-13 14:56:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 14:56:30]     "pilotErrorCode": 1305,
[2025-12-13 14:56:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 14:56:30]  *** Listing of results directory ***
[2025-12-13 14:56:30] total 221692
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-13 14:56:30] -rwx------. 1 boinc boinc     36322 Dec 13 03:36 runpilot2-wrapper.sh
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:36 queuedata.json
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc       100 Dec 13 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:56:30] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 14:48 run_atlas
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc       105 Dec 13 14:48 job.xml
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc      6596 Dec 13 14:48 init_data.xml
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc 222853622 Dec 13 14:48 EVNT.47898761._000197.pool.root.1
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc     15847 Dec 13 14:48 start_atlas.sh
[2025-12-13 14:56:30] drwxrwx--x. 2 boinc boinc      4096 Dec 13 14:48 shared
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc    592395 Dec 13 14:48 input.tar.gz
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc         0 Dec 13 14:48 boinc_lockfile
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc      2504 Dec 13 14:48 pandaJob.out
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc    991728 Dec 13 14:49 agis_schedconf.cvmfs.json
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc   1516240 Dec 13 14:49 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:56:30] drwx------. 5 boinc boinc      4096 Dec 13 14:49 pilot3
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc       965 Dec 13 14:53 memory_monitor_summary.json
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc     23130 Dec 13 14:53 log.47898763._003031.job.log.tgz.1
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc      8401 Dec 13 14:55 heartbeat.json
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc       525 Dec 13 14:56 boinc_task_state.xml
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc      8192 Dec 13 14:56 boinc_mmap_file
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc        23 Dec 13 14:56 wrapper_checkpoint.txt
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc        95 Dec 13 14:56 pilot_heartbeat.json
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc       823 Dec 13 14:56 pilotlog.txt
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc    104979 Dec 13 14:56 log.47898763._003031.job.log.1
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc       188 Dec 13 14:56 output.list
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc       620 Dec 13 14:56 runtime_log
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc    143360 Dec 13 14:56 result.tar.gz
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc      8636 Dec 13 14:56 runtime_log.err
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc       644 Dec 13 14:56 1q4NDmC6co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmG2OKDmsPA0Kn.diag
[2025-12-13 14:56:30] -rw-r--r--. 1 boinc boinc     21846 Dec 13 14:56 stderr.txt
[2025-12-13 14:56:30] No HITS result produced
[2025-12-13 14:56:30]  *** Contents of shared directory: ***
[2025-12-13 14:56:30] total 218368
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc 222853622 Dec 13 14:48 ATLAS.root_0
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc     15847 Dec 13 14:48 start_atlas.sh
[2025-12-13 14:56:30] -rw-r--r--. 2 boinc boinc    592395 Dec 13 14:48 input.tar.gz
[2025-12-13 14:56:30] -rw-------. 1 boinc boinc    143360 Dec 13 14:56 result.tar.gz
14:56:32 (4180198): run_atlas exited; CPU time 36.038304
14:56:32 (4180198): called boinc_finish(0)

</stderr_txt>
]]>

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