Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:50:22 (17693): wrapper (7.7.26015): starting
05:50:22 (17693): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 05:50:22] Arguments: --nthreads 8
[2025-12-14 05:50:22] Threads: 8
[2025-12-14 05:50:22] Checking for CVMFS
[2025-12-14 05:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 05:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 05:50:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 05:50:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 05:50:25] 2.11.2.0 4554 310836 146348 153984 2 61 14808186 25165824 4180 130560 12 134976082 99.848 91119599 3027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 05:50:25] CVMFS is ok
[2025-12-14 05:50:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 05:50:25] Checking for apptainer binary...
[2025-12-14 05:50:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 05:50:25] Running /usr/bin/apptainer --version
[2025-12-14 05:50:25] apptainer version 1.3.2-1.el7
[2025-12-14 05:50:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 05:50:39] cg-vwn316.simple-grid.lan
[2025-12-14 05:50:39] apptainer works
[2025-12-14 05:50:39] Set ATHENA_PROC_NUMBER=8
[2025-12-14 05:50:39] Set ATHENA_CORE_NUMBER=8
[2025-12-14 05:50:40] Starting ATLAS job with PandaID=6926673212
[2025-12-14 05:50:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:31:57]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:31:57] 2025-12-14 21:30:47,815 | INFO     | monitor loop #4121: job 0:6926673212 is in state 'finished'
[2025-12-14 22:31:57] 2025-12-14 21:30:47,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:31:57] 2025-12-14 21:30:48,981 | INFO     | time since job start (59807s) is within the limit (174528.0s)
[2025-12-14 22:31:57] 2025-12-14 21:30:50,321 | INFO     | monitor loop #4122: job 0:6926673212 is in state 'finished'
[2025-12-14 22:31:57] 2025-12-14 21:30:50,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:31:57] 2025-12-14 21:30:50,988 | INFO     | time since job start (59809s) is within the limit (174528.0s)
[2025-12-14 22:31:57] 2025-12-14 21:30:52,827 | INFO     | monitor loop #4123: job 0:6926673212 is in state 'finished'
[2025-12-14 22:31:57] 2025-12-14 21:30:52,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:31:57] 2025-12-14 21:30:52,995 | INFO     | time since job start (59811s) is within the limit (174528.0s)
[2025-12-14 22:31:57] 2025-12-14 21:30:54,187 | INFO     | PID=21484 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 22:31:57] 2025-12-14 21:30:54,187 | INFO     | .. there are 9 such processes running
[2025-12-14 22:31:57] 2025-12-14 21:30:55,187 | INFO     | time since job start (59814s) is within the limit (174528.0s)
[2025-12-14 22:31:57] 2025-12-14 21:30:55,333 | INFO     | monitor loop #4124: job 0:6926673212 is in state 'finished'
[2025-12-14 22:31:57] 2025-12-14 21:30:55,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:31:57] 2025-12-14 21:30:57,195 | INFO     | time since job start (59816s) is within the limit (174528.0s)
[2025-12-14 22:31:57] 2025-12-14 21:30:57,841 | INFO     | monitor loop #4125: job 0:6926673212 is in state 'finished'
[2025-12-14 22:31:57] 2025-12-14 21:30:57,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:31:57] 2025-12-14 21:30:57,932 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 22:31:57] 2025-12-14 21:30:57,933 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 22:31:57] 2025-12-14 21:30:57,935 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6926673212/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:31:57] 2025-12-14 21:30:57,935 | INFO     | extracted standard info from prmon json
[2025-12-14 22:31:57] 2025-12-14 21:30:57,936 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:31:57] 2025-12-14 21:30:57,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:31:57] 2025-12-14 21:30:57,960 | INFO     | fitting pss+swap vs Time
[2025-12-14 22:31:57] 2025-12-14 21:30:57,961 | INFO     | sum of square deviations: 281257189922.6443
[2025-12-14 22:31:57] 2025-12-14 21:30:58,007 | INFO     | sum of deviations: 1770352357933.752
[2025-12-14 22:31:57] 2025-12-14 21:30:58,007 | INFO     | mean x: 1765718222.5743802
[2025-12-14 22:31:57] 2025-12-14 21:30:58,007 | INFO     | mean y: 3242407.8367768596
[2025-12-14 22:31:57] 2025-12-14 21:30:58,008 | INFO     | intersect: -11110938956.3477
[2025-12-14 22:31:57] 2025-12-14 21:30:58,009 | INFO     | chi2: 24.490374918435194
[2025-12-14 22:31:57] 2025-12-14 21:30:58,010 | INFO     | sum of square deviations: 276921649076.84283
[2025-12-14 22:31:57] 2025-12-14 21:30:58,043 | INFO     | sum of deviations: 2177620153203.2024
[2025-12-14 22:31:57] 2025-12-14 21:30:58,043 | INFO     | mean x: 1765718070.0799584
[2025-12-14 22:31:57] 2025-12-14 21:30:58,043 | INFO     | mean y: 3256733.984423676
[2025-12-14 22:31:57] 2025-12-14 21:30:58,043 | INFO     | intersect: -13881765499.196836
[2025-12-14 22:31:57] 2025-12-14 21:30:58,045 | INFO     | chi2: 20.6419183413796
[2025-12-14 22:31:57] 2025-12-14 21:30:58,045 | INFO     | current chi2=20.6419183413796 (change=15.714159500917471 %)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,045 | INFO     | right removable region: 962
[2025-12-14 22:31:57] 2025-12-14 21:30:58,047 | INFO     | sum of square deviations: 276921014676.8427
[2025-12-14 22:31:57] 2025-12-14 21:30:58,073 | INFO     | sum of deviations: 1292255009383.5137
[2025-12-14 22:31:57] 2025-12-14 21:30:58,074 | INFO     | mean x: 1765718375.0799584
[2025-12-14 22:31:57] 2025-12-14 21:30:58,074 | INFO     | mean y: 3259222.8764278297
[2025-12-14 22:31:57] 2025-12-14 21:30:58,074 | INFO     | intersect: -8236485305.072553
[2025-12-14 22:31:57] 2025-12-14 21:30:58,075 | INFO     | chi2: 19.29999397878375
[2025-12-14 22:31:57] 2025-12-14 21:30:58,075 | INFO     | current chi2=19.29999397878375 (change=21.193554434907288 %)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,075 | INFO     | left removable region: 10
[2025-12-14 22:31:57] 2025-12-14 21:30:58,077 | INFO     | sum of square deviations: 267539529179.86554
[2025-12-14 22:31:57] 2025-12-14 21:30:58,102 | INFO     | sum of deviations: 1324826241693.981
[2025-12-14 22:31:57] 2025-12-14 21:30:58,102 | INFO     | mean x: 1765718344.592437
[2025-12-14 22:31:57] 2025-12-14 21:30:58,102 | INFO     | mean y: 3293327.3581932774
[2025-12-14 22:31:57] 2025-12-14 21:30:58,103 | INFO     | intersect: -8740349174.845047
[2025-12-14 22:31:57] 2025-12-14 21:30:58,104 | INFO     | chi2: 9.8351295363152
[2025-12-14 22:31:57] 2025-12-14 21:30:58,104 | INFO     | current memory leak: 4.95 B/s (using 952 data points, chi2=9.84)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | could have reported an average CPU frequency of 1999 MHz (34 samples)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | ..............................
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . Timing measurements:
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . get job = 0 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . initial setup = 8 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . payload setup = 326 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . stage-in = 0 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,106 | INFO     | . payload execution = 59196 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,107 | INFO     | . stage-out = 4 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,107 | INFO     | . log creation = 1 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,107 | INFO     | ..............................
[2025-12-14 22:31:57] 2025-12-14 21:30:58,234 | INFO     | 
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | job summary report
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | --------------------------------------------------
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | PanDA job id: 6926673212
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | task id: 47866654
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | errors: (none)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | pilot state: finished 
[2025-12-14 22:31:57] 2025-12-14 21:30:58,235 | INFO     | transexitcode: 0
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | exeerrorcode: 0
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | exeerrordiag: 
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | exitcode: 0
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | exitmsg: OK
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | cpuconsumptiontime: 217210 s
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | nevents: 1000
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | neventsw: 0
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | pid: 28783
[2025-12-14 22:31:57] 2025-12-14 21:30:58,236 | INFO     | pgrp: 28783
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | corecount: 8
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | event service: False
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | sizes: {0: 2284514, 1: 2284514, 11: 2284542, 22: 2284570, 33: 2284598, 44: 2284654, 54: 2284810, 65: 2284838, 76: 2284866, 87: 2284922, 90: 2285212, 97: 2285520, 5
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | --------------------------------------------------
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | 
[2025-12-14 22:31:57] 2025-12-14 21:30:58,237 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:31:57] 2025-12-14 21:30:58,719 | INFO     | job 6926673212 has completed (purged errors)
[2025-12-14 22:31:57] 2025-12-14 21:30:58,719 | INFO     | overall cleanup function is called
[2025-12-14 22:31:57] 2025-12-14 21:30:59,737 | INFO     | --- collectZombieJob: --- 10, [28783]
[2025-12-14 22:31:57] 2025-12-14 21:30:59,738 | INFO     | zombie collector waiting for pid 28783
[2025-12-14 22:31:57] 2025-12-14 21:30:59,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:31:57] 2025-12-14 21:30:59,738 | INFO     | collected zombie processes
[2025-12-14 22:31:57] 2025-12-14 21:30:59,738 | INFO     | will attempt to kill all subprocesses of pid=28783
[2025-12-14 22:31:57] 2025-12-14 21:30:59,869 | INFO     | process IDs to be killed: [28783] (in reverse order)
[2025-12-14 22:31:57] 2025-12-14 21:31:00,864 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:31:57] 2025-12-14 21:31:00,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:31:57] 2025-12-14 21:31:00,868 | INFO     | did not find any defunct processes belonging to 28783
[2025-12-14 22:31:57] 2025-12-14 21:31:00,871 | INFO     | did not find any defunct processes belonging to 28783
[2025-12-14 22:31:57] 2025-12-14 21:31:00,871 | INFO     | ready for new job
[2025-12-14 22:31:57] 2025-12-14 21:31:00,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:31:57] 2025-12-14 21:31:00,876 | INFO     | ***************************************
[2025-12-14 22:31:57] 2025-12-14 21:31:00,876 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:31:57] 2025-12-14 21:31:00,876 | INFO     | ***************************************
[2025-12-14 22:31:57] 2025-12-14 21:31:00,876 | INFO     | 
[2025-12-14 22:31:57] 2025-12-14 21:31:00,877 | INFO     | pilot is running in a VM
[2025-12-14 22:31:57] 2025-12-14 21:31:00,877 | INFO     | architecture information:
[2025-12-14 22:31:57] 2025-12-14 21:31:00,886 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:31:57] 2025-12-14 21:31:01,080 | INFO     | cat /etc/os-release:
[2025-12-14 22:31:57] NAME="CentOS Linux"
[2025-12-14 22:31:57] VERSION="7 (Core)"
[2025-12-14 22:31:57] ID="centos"
[2025-12-14 22:31:57] ID_LIKE="rhel fedora"
[2025-12-14 22:31:57] VERSION_ID="7"
[2025-12-14 22:31:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:31:57] ANSI_COLOR="0;31"
[2025-12-14 22:31:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:31:57] HOME_URL="https://www.centos.org/"
[2025-12-14 22:31:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:31:57] 
[2025-12-14 22:31:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:31:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:31:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:31:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:31:57] 
[2025-12-14 22:31:57] 2025-12-14 21:31:01,080 | INFO     | ***************************************
[2025-12-14 22:31:57] 2025-12-14 21:31:01,584 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-14 22:31:57] 2025-12-14 21:31:01,900 | INFO     | sufficient remaining disk space (496570990592 B)
[2025-12-14 22:31:57] 2025-12-14 21:31:01,900 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:31:57] 2025-12-14 21:31:01,901 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:31:57] 2025-12-14 21:31:01,901 | INFO     | update_server=False
[2025-12-14 22:31:57] 2025-12-14 21:31:01,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:31:57] 2025-12-14 21:31:01,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:31:57] 2025-12-14 21:31:01,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:31:57] 2025-12-14 21:31:01,909 | INFO     | aborting loop
[2025-12-14 22:31:57] 2025-12-14 21:31:02,510 | INFO     | all payload control threads have been joined
[2025-12-14 22:31:57] 2025-12-14 21:31:02,841 | INFO     | all data control threads have been joined
[2025-12-14 22:31:57] 2025-12-14 21:31:02,852 | INFO     | all job control threads have been joined
[2025-12-14 22:31:57] 2025-12-14 21:31:02,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:31:57] 2025-12-14 21:31:02,907 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:02,915 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,168 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,239 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:31:57] 2025-12-14 21:31:03,358 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,510 | INFO     | [job] validate thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,516 | INFO     | [payload] control thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,585 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,847 | INFO     | [data] control thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,858 | INFO     | [job] control thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:03,890 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:04,022 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:04,252 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:04,301 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:04,892 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:05,910 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:31:57] 2025-12-14 21:31:30,427 | INFO     | PID=21484 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 22:31:57] 2025-12-14 21:31:30,427 | INFO     | .. there are 9 such processes running
[2025-12-14 22:31:57] 2025-12-14 21:31:30,427 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:31:57] 2025-12-14 21:31:30,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:31:57] 2025-12-14 21:31:30,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:31:57] 2025-12-14 21:31:45,011 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:31:57] 2025-12-14 21:31:46,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505527113536)>', '<ExcThread(monitor, started 140504922568448)>']
[2025-12-14 22:31:57] 2025-12-14 21:31:47,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:31:57] 2025-12-14 21:31:47,530 | INFO     | [monitor] control thread has ended
[2025-12-14 22:31:57] 2025-12-14 21:31:51,960 | INFO     | all workflow threads have been joined
[2025-12-14 22:31:57] 2025-12-14 21:31:51,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:31:57] 2025-12-14 21:31:51,961 | INFO     | traces error code: 0
[2025-12-14 22:31:57] 2025-12-14 21:31:51,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:31:57] 2025-12-14 21:31:52,309 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:31:57] 2025-12-14 21:31:52,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:31:57] 2025-12-14 21:31:52,498 [wrapper] pilotpid: 21484
[2025-12-14 22:31:57] 2025-12-14 21:31:52,586 [wrapper] Pilot exit status: 0
[2025-12-14 22:31:57] 2025-12-14 21:31:52,916 [wrapper] pandaids: 6926673212
[2025-12-14 22:31:57] 2025-12-14 21:31:53,928 [wrapper] cleanup supervisor_pilot  9664 21485
[2025-12-14 22:31:57] 2025-12-14 21:31:54,011 [wrapper] Test setup, not cleaning
[2025-12-14 22:31:57] 2025-12-14 21:31:54,121 [wrapper] apfmon messages muted
[2025-12-14 22:31:57] 2025-12-14 21:31:54,178 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:31:57] 2025-12-14 21:31:54,285 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:31:57]  *** Error codes and diagnostics ***
[2025-12-14 22:31:57]     "exeErrorCode": 0,
[2025-12-14 22:31:57]     "exeErrorDiag": "",
[2025-12-14 22:31:57]     "pilotErrorCode": 0,
[2025-12-14 22:31:57]     "pilotErrorDiag": "",
[2025-12-14 22:31:57]  *** Listing of results directory ***
[2025-12-14 22:31:57] total 936884
[2025-12-14 22:31:57] -rwx------. 1 boinc boinc     36292 Dec 11 11:18 runpilot2-wrapper.sh
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc      5112 Dec 11 11:18 queuedata.json
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc    579449 Dec 11 11:18 pilot3.tar.gz
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc       100 Dec 14 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:31:57] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 05:50 run_atlas
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc       105 Dec 14 05:50 job.xml
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc 328599395 Dec 14 05:50 EVNT.47866652._000003.pool.root.1
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc      6392 Dec 14 05:50 init_data.xml
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:50 start_atlas.sh
[2025-12-14 22:31:57] drwxrwx--x. 2 boinc boinc        68 Dec 14 05:50 shared
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc    592556 Dec 14 05:50 input.tar.gz
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc         0 Dec 14 05:50 boinc_lockfile
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc      2817 Dec 14 05:50 pandaJob.out
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc    991728 Dec 14 05:53 agis_schedconf.cvmfs.json
[2025-12-14 22:31:57] drwx------. 5 boinc boinc      4096 Dec 14 05:54 pilot3
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc       533 Dec 14 22:09 boinc_task_state.xml
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc 606383131 Dec 14 22:28 HITS.47866654._000021.pool.root.1
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc      1030 Dec 14 22:29 memory_monitor_summary.json
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc   1516240 Dec 14 22:29 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc   2217163 Dec 14 22:29 log.47866654._000021.job.log.tgz.1
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc     26869 Dec 14 22:30 heartbeat.json
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc        95 Dec 14 22:30 pilot_heartbeat.json
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc      8192 Dec 14 22:31 boinc_mmap_file
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc        29 Dec 14 22:31 wrapper_checkpoint.txt
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc      4884 Dec 14 22:31 pilotlog.txt
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc   8000981 Dec 14 22:31 log.47866654._000021.job.log.1
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc       353 Dec 14 22:31 output.list
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc       620 Dec 14 22:31 runtime_log
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc  10260480 Dec 14 22:31 result.tar.gz
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc      8817 Dec 14 22:31 runtime_log.err
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc       661 Dec 14 22:31 b92KDmfvsn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmf4MKDmqKj13m.diag
[2025-12-14 22:31:57] -rw-r--r--. 1 boinc boinc     21411 Dec 14 22:31 stderr.txt
[2025-12-14 22:31:57] HITS file was successfully produced:
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc 606383131 Dec 14 22:28 shared/HITS.pool.root.1
[2025-12-14 22:31:57]  *** Contents of shared directory: ***
[2025-12-14 22:31:57] total 923688
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc 328599395 Dec 14 05:50 ATLAS.root_0
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:50 start_atlas.sh
[2025-12-14 22:31:57] -rw-r--r--. 2 boinc boinc    592556 Dec 14 05:50 input.tar.gz
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc 606383131 Dec 14 22:28 HITS.pool.root.1
[2025-12-14 22:31:57] -rw-------. 1 boinc boinc  10260480 Dec 14 22:31 result.tar.gz
22:31:58 (17693): run_atlas exited; CPU time 217513.525213
22:31:58 (17693): called boinc_finish(0)

</stderr_txt>
]]>

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