Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:20:40 (6240): wrapper (7.7.26015): starting
01:20:40 (6240): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 01:20:40] Arguments: --nthreads 8
[2025-12-14 01:20:40] Threads: 8
[2025-12-14 01:20:40] Checking for CVMFS
[2025-12-14 01:20:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 01:20:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 01:20:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 01:20:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 01:20:41] 2.11.0.0 4382 13896 53496 153978 3 188 3105785 4096001 2663 130560 0 203127 96.701 1065341 491 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-14 01:20:41] CVMFS is ok
[2025-12-14 01:20:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 01:20:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 01:20:41] Further information can be found at the LHC@home message board.
[2025-12-14 01:20:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 01:20:41] Checking for apptainer binary...
[2025-12-14 01:20:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-14 01:20:41] apptainer is not installed, using version from CVMFS
[2025-12-14 01:20:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 01:20:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_10973351/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node179
[2025-12-14 01:20:41] apptainer works
[2025-12-14 01:20:41] Set ATHENA_PROC_NUMBER=8
[2025-12-14 01:20:41] Set ATHENA_CORE_NUMBER=8
[2025-12-14 01:20:41] Starting ATLAS job with PandaID=6929218814
[2025-12-14 01:20:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10973351/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 02:30:02]  *** The last 200 lines of the pilot log: ***
[2025-12-14 02:30:02]  mtime=0
[2025-12-14 02:30:02]  protocol_id=None
[2025-12-14 02:30:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 02:30:02]  replicas=None
[2025-12-14 02:30:02]  scope=mc23_13p6TeV
[2025-12-14 02:30:02]  status=None
[2025-12-14 02:30:02]  status_code=0
[2025-12-14 02:30:02]  storage_token=
[2025-12-14 02:30:02]  surl=/tmp/job_10973351/atlas/pilot/slots/0/PanDA_Pilot-6929218814/log.47898836._000375.job.log.tgz.1
[2025-12-14 02:30:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/64/log.47898836._000375.job.log.tgz.1
[2025-12-14 02:30:02]  workdir=None
[2025-12-14 02:30:02] ]
[2025-12-14 02:30:02] 2025-12-14 01:29:43,772 | INFO     | transferring file log.47898836._000375.job.log.tgz.1 from /tmp/job_10973351/atlas/pilot/slots/0/PanDA_Pilot-6929218814/log.47898836._000375.job.log.tgz.1 to /tmp/j
[2025-12-14 02:30:02] 2025-12-14 01:29:43,772 | INFO     | executing command: /usr/bin/env mv /tmp/job_10973351/atlas/pilot/slots/0/PanDA_Pilot-6929218814/log.47898836._000375.job.log.tgz.1 /tmp/job_10973351/atlas/pilot/sl
[2025-12-14 02:30:02] 2025-12-14 01:29:43,779 | INFO     | adding to output.list: log.47898836._000375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/64/log.47898836._000375.job.log.tg
[2025-12-14 02:30:02] 2025-12-14 01:29:43,780 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 02:30:02] 2025-12-14 01:29:43,780 | INFO     | summary of transferred files:
[2025-12-14 02:30:02] 2025-12-14 01:29:43,780 | INFO     |  -- lfn=log.47898836._000375.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 02:30:02] 2025-12-14 01:29:43,780 | INFO     | stage-out finished correctly
[2025-12-14 02:30:02] 2025-12-14 01:29:44,090 | INFO     | time since job start (4139s) is within the limit (174528.0s)
[2025-12-14 02:30:02] 2025-12-14 01:29:45,737 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 02:30:02] 2025-12-14 01:29:45,791 | INFO     | job 6929218814 has state=finished
[2025-12-14 02:30:02] 2025-12-14 01:29:45,792 | INFO     | preparing for final server update for job 6929218814 in state='finished'
[2025-12-14 02:30:02] 2025-12-14 01:29:46,092 | INFO     | time since job start (4141s) is within the limit (174528.0s)
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | this job has now completed (state=finished)
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | log transfer has been attempted: DONE
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | job 6929218814 has finished - writing final server update
[2025-12-14 02:30:02] 2025-12-14 01:29:46,374 | INFO     | total number of processed events: 400 (read)
[2025-12-14 02:30:02] 2025-12-14 01:29:46,375 | INFO     | executing command: lscpu
[2025-12-14 02:30:02] 2025-12-14 01:29:46,405 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 02:30:02] 2025-12-14 01:29:47,542 | WARNING  | process 22742 can no longer be monitored (due to stat problems) - aborting
[2025-12-14 02:30:02] 2025-12-14 01:29:47,542 | INFO     | using path: /tmp/job_10973351/atlas/pilot/slots/0/PanDA_Pilot-6929218814/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 02:30:02] 2025-12-14 01:29:47,632 | INFO     | number of running child processes to parent process 22742: 1
[2025-12-14 02:30:02] 2025-12-14 01:29:47,632 | INFO     | maximum number of monitored processes: 6
[2025-12-14 02:30:02] 2025-12-14 01:29:48,067 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 02:30:02] 2025-12-14 01:29:48,071 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2380.99975
[2025-12-14 02:30:02] 2025-12-14 01:29:48,076 | INFO     | using path: /tmp/job_10973351/atlas/pilot/slots/0/PanDA_Pilot-6929218814/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,076 | INFO     | extracted standard info from prmon json
[2025-12-14 02:30:02] 2025-12-14 01:29:48,076 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 02:30:02] 2025-12-14 01:29:48,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 02:30:02] 2025-12-14 01:29:48,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 02:30:02] 2025-12-14 01:29:48,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 02:30:02] 2025-12-14 01:29:48,077 | INFO     | fitting pss+swap vs Time
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | sum of square deviations: 70364110.0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | sum of deviations: -845080275.0000002
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | mean x: 1765673798.0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | mean y: 2581630.475409836
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | intersect: 21208507474.973904
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | chi2: 0.007718628856074848
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | current memory leak: -12.01 B/s (using 61 data points, chi2=0.01)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | could have reported an average CPU frequency of 2646 MHz (6 samples)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | ..............................
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . Timing measurements:
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . get job = 0 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . initial setup = 1 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . payload setup = 2 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . stage-in = 0 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . payload execution = 4118 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,078 | INFO     | . stage-out = 0 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,079 | INFO     | . log creation = 0 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,079 | INFO     | ..............................
[2025-12-14 02:30:02] 2025-12-14 01:29:48,102 | INFO     | time since job start (4143s) is within the limit (174528.0s)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | 
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | job summary report
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | --------------------------------------------------
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | PanDA job id: 6929218814
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | task id: 47898836
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | errors: (none)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | pilot state: finished 
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | transexitcode: 0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | exeerrorcode: 0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | exeerrordiag: 
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | exitcode: 0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | exitmsg: OK
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | cpuconsumptiontime: 29399 s
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | nevents: 400
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | neventsw: 0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | pid: 22742
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | pgrp: 22742
[2025-12-14 02:30:02] 2025-12-14 01:29:48,127 | INFO     | corecount: 8
[2025-12-14 02:30:02] 2025-12-14 01:29:48,128 | INFO     | event service: False
[2025-12-14 02:30:02] 2025-12-14 01:29:48,128 | INFO     | sizes: {0: 2284128, 2: 2284390, 11: 2284418, 4124: 2310477, 4125: 2319505, 4127: 2319561, 4129: 2319883}
[2025-12-14 02:30:02] 2025-12-14 01:29:48,128 | INFO     | --------------------------------------------------
[2025-12-14 02:30:02] 2025-12-14 01:29:48,128 | INFO     | 
[2025-12-14 02:30:02] 2025-12-14 01:29:48,128 | INFO     | executing command: ls -lF /tmp/job_10973351/atlas/pilot/slots/0
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | job 6929218814 has completed (purged errors)
[2025-12-14 02:30:02] 2025-12-14 01:29:48,137 | INFO     | overall cleanup function is called
[2025-12-14 02:30:02] 2025-12-14 01:29:49,143 | INFO     | --- collectZombieJob: --- 10, [22742]
[2025-12-14 02:30:02] 2025-12-14 01:29:49,143 | INFO     | zombie collector waiting for pid 22742
[2025-12-14 02:30:02] 2025-12-14 01:29:49,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 02:30:02] 2025-12-14 01:29:49,143 | INFO     | collected zombie processes
[2025-12-14 02:30:02] 2025-12-14 01:29:49,143 | INFO     | will attempt to kill all subprocesses of pid=22742
[2025-12-14 02:30:02] 2025-12-14 01:29:49,233 | INFO     | process IDs to be killed: [22742] (in reverse order)
[2025-12-14 02:30:02] 2025-12-14 01:29:49,264 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 02:30:02] 2025-12-14 01:29:49,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 02:30:02] 2025-12-14 01:29:49,267 | INFO     | did not find any defunct processes belonging to 22742
[2025-12-14 02:30:02] 2025-12-14 01:29:49,270 | INFO     | did not find any defunct processes belonging to 22742
[2025-12-14 02:30:02] 2025-12-14 01:29:49,270 | INFO     | ready for new job
[2025-12-14 02:30:02] 2025-12-14 01:29:49,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 02:30:02] 2025-12-14 01:29:49,271 | INFO     | ***************************************
[2025-12-14 02:30:02] 2025-12-14 01:29:49,271 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 02:30:02] 2025-12-14 01:29:49,271 | INFO     | ***************************************
[2025-12-14 02:30:02] 2025-12-14 01:29:49,271 | INFO     | 
[2025-12-14 02:30:02] 2025-12-14 01:29:49,285 | INFO     | architecture information:
[2025-12-14 02:30:02] 2025-12-14 01:29:49,285 | INFO     | executing command: cat /etc/os-release
[2025-12-14 02:30:02] 2025-12-14 01:29:49,291 | INFO     | cat /etc/os-release:
[2025-12-14 02:30:02] NAME="CentOS Linux"
[2025-12-14 02:30:02] VERSION="7 (Core)"
[2025-12-14 02:30:02] ID="centos"
[2025-12-14 02:30:02] ID_LIKE="rhel fedora"
[2025-12-14 02:30:02] VERSION_ID="7"
[2025-12-14 02:30:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 02:30:02] ANSI_COLOR="0;31"
[2025-12-14 02:30:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 02:30:02] HOME_URL="https://www.centos.org/"
[2025-12-14 02:30:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 02:30:02] 
[2025-12-14 02:30:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 02:30:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 02:30:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 02:30:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 02:30:02] 
[2025-12-14 02:30:02] 2025-12-14 01:29:49,291 | INFO     | ***************************************
[2025-12-14 02:30:02] 2025-12-14 01:29:49,794 | INFO     | executing command: df -mP /tmp/job_10973351/atlas/pilot/slots/0
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | INFO     | sufficient remaining disk space (227339665408 B)
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | INFO     | update_server=False
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 02:30:02] 2025-12-14 01:29:49,800 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-14 02:30:02] 2025-12-14 01:29:49,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:30:02] 2025-12-14 01:29:49,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 02:30:02] 2025-12-14 01:29:49,801 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 02:30:02] 2025-12-14 01:29:49,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 02:30:02] 2025-12-14 01:29:49,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 02:30:02] 2025-12-14 01:29:50,041 | INFO     | all job control threads have been joined
[2025-12-14 02:30:02] 2025-12-14 01:29:50,124 | INFO     | all payload control threads have been joined
[2025-12-14 02:30:02] 2025-12-14 01:29:50,134 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 02:30:02] 2025-12-14 01:29:50,135 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 02:30:02] 2025-12-14 01:29:50,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:30:02] 2025-12-14 01:29:50,135 | INFO     | will abort loop
[2025-12-14 02:30:02] 2025-12-14 01:29:50,640 | INFO     | all data control threads have been joined
[2025-12-14 02:30:02] 2025-12-14 01:29:50,804 | INFO     | [job] queue monitor thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:50,806 | INFO     | [job] retrieve thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,046 | INFO     | [job] control thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,114 | INFO     | [job] validate thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,129 | INFO     | [payload] control thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,140 | INFO     | [job] job monitor thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,191 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,452 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,478 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,501 | INFO     | [payload] failed_post thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,645 | INFO     | [data] control thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,704 | INFO     | [data] copytool_in thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 02:30:02] 2025-12-14 01:29:51,806 | INFO     | [data] copytool_out thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:51,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:52,006 | INFO     | [payload] validate_post thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:52,084 | INFO     | [monitor] cgroup control has ended
[2025-12-14 02:30:02] 2025-12-14 01:29:55,793 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 02:30:02] 2025-12-14 01:29:56,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060819200)>']
[2025-12-14 02:30:02] 2025-12-14 01:29:57,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 02:30:02] 2025-12-14 01:29:57,839 | INFO     | [monitor] control thread has ended
[2025-12-14 02:30:02] 2025-12-14 01:30:01,989 | INFO     | all workflow threads have been joined
[2025-12-14 02:30:02] 2025-12-14 01:30:01,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 02:30:02] 2025-12-14 01:30:01,989 | INFO     | traces error code: 0
[2025-12-14 02:30:02] 2025-12-14 01:30:01,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 02:30:02] 2025-12-14 01:30:02,039 [wrapper] ==== pilot stdout END ====
[2025-12-14 02:30:02] 2025-12-14 01:30:02,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 02:30:02] 2025-12-14 01:30:02,041 [wrapper] pilotpid: 11160
[2025-12-14 02:30:02] 2025-12-14 01:30:02,043 [wrapper] Pilot exit status: 0
[2025-12-14 02:30:02] 2025-12-14 01:30:02,046 [wrapper] pandaids: 6929218814
[2025-12-14 02:30:02] 2025-12-14 01:30:02,068 [wrapper] cleanup supervisor_pilot 17566 11161
[2025-12-14 02:30:02] 2025-12-14 01:30:02,069 [wrapper] Test setup, not cleaning
[2025-12-14 02:30:02] 2025-12-14 01:30:02,070 [wrapper] apfmon messages muted
[2025-12-14 02:30:02] 2025-12-14 01:30:02,071 [wrapper] ==== wrapper stdout END ====
[2025-12-14 02:30:02] 2025-12-14 01:30:02,072 [wrapper] ==== wrapper stderr END ====
[2025-12-14 02:30:02]  *** Error codes and diagnostics ***
[2025-12-14 02:30:02]     "exeErrorCode": 0,
[2025-12-14 02:30:02]     "exeErrorDiag": "",
[2025-12-14 02:30:02]     "pilotErrorCode": 0,
[2025-12-14 02:30:02]     "pilotErrorDiag": "",
[2025-12-14 02:30:02]  *** Listing of results directory ***
[2025-12-14 02:30:02] total 413856
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    579449 Dec 13 09:48 pilot3.tar.gz
[2025-12-14 02:30:02] -rwx------ 1 mf493845 unix-user     36322 Dec 13 09:48 runpilot2-wrapper.sh
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      5112 Dec 13 09:50 queuedata.json
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user       100 Dec 14 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 02:30:02] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec 14 00:25 run_atlas
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user       105 Dec 14 00:25 job.xml
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user 216748102 Dec 14 01:20 EVNT.47898833._000015.pool.root.1
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 14 01:20 start_atlas.sh
[2025-12-14 02:30:02] drwxrwx--x 2 mf493845 unix-user       100 Dec 14 01:20 shared
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user    592390 Dec 14 01:20 input.tar.gz
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      6392 Dec 14 01:20 init_data.xml
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user         0 Dec 14 01:20 boinc_setup_complete
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      8192 Dec 14 01:20 boinc_mmap_file
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user         0 Dec 14 01:20 boinc_lockfile
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      2547 Dec 14 01:20 pandaJob.out
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    991736 Dec 14 01:20 agis_schedconf.cvmfs.json
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user   1516240 Dec 14 01:20 agis_ddmendpoints.agis.ALL.json
[2025-12-14 02:30:02] drwx------ 5 mf493845 unix-user       440 Dec 14 01:20 pilot3
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user 201221687 Dec 14 02:29 HITS.47898836._000375.pool.root.1
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      1015 Dec 14 02:29 memory_monitor_summary.json
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user        95 Dec 14 02:29 pilot_heartbeat.json
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    331331 Dec 14 02:29 log.47898836._000375.job.log.tgz.1
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      7761 Dec 14 02:29 heartbeat.json
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      4752 Dec 14 02:30 pilotlog.txt
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    631744 Dec 14 02:30 log.47898836._000375.job.log.1
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user       357 Dec 14 02:30 output.list
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user       620 Dec 14 02:30 runtime_log
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    983040 Dec 14 02:30 result.tar.gz
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user      9220 Dec 14 02:30 runtime_log.err
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user       641 Dec 14 02:30 qr3NDm0Tao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSFOKDmZ7QJUm.diag
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user     22169 Dec 14 02:30 stderr.txt
[2025-12-14 02:30:02] HITS file was successfully produced:
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user 201221687 Dec 14 02:29 shared/HITS.pool.root.1
[2025-12-14 02:30:02]  *** Contents of shared directory: ***
[2025-12-14 02:30:02] total 409736
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user 216748102 Dec 14 01:20 ATLAS.root_0
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 14 01:20 start_atlas.sh
[2025-12-14 02:30:02] -rw-r--r-- 2 mf493845 unix-user    592390 Dec 14 01:20 input.tar.gz
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user 201221687 Dec 14 02:29 HITS.pool.root.1
[2025-12-14 02:30:02] -rw------- 1 mf493845 unix-user    983040 Dec 14 02:30 result.tar.gz
02:30:04 (6240): run_atlas exited; CPU time 29457.975041
02:30:04 (6240): called boinc_finish(0)

</stderr_txt>
]]>

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