Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:47 (19016): wrapper (7.7.26015): starting
17:29:47 (19016): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 17:29:47] Arguments: --nthreads 8
[2025-12-13 17:29:47] Threads: 8
[2025-12-13 17:29:47] Checking for CVMFS
[2025-12-13 17:29:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 17:29:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 17:29:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 17:29:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 17:29:48] 2.11.2.0 3643 90965 130480 153975 0 57 17155264 18432000 1833 130560 0 56114579 99.980 3471371 29306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 17:29:48] CVMFS is ok
[2025-12-13 17:29:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 17:29:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 17:29:48] Further information can be found at the LHC@home message board.
[2025-12-13 17:29:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 17:29:48] Checking for apptainer binary...
[2025-12-13 17:29:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 17:29:48] Running /usr/bin/apptainer --version
[2025-12-13 17:29:48] apptainer version 1.3.2-1.el7
[2025-12-13 17:29:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 17:29:49] c-206-15.aglt2.org
[2025-12-13 17:29:49] apptainer works
[2025-12-13 17:29:49] Set ATHENA_PROC_NUMBER=8
[2025-12-13 17:29:49] Set ATHENA_CORE_NUMBER=8
[2025-12-13 17:29:49] Starting ATLAS job with PandaID=6929266400
[2025-12-13 17:29:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:49:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:49:32] 2025-12-14 02:49:00,474 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 21:49:32] 2025-12-14 02:49:00,480 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.7083333333335
[2025-12-13 21:49:32] 2025-12-14 02:49:00,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929266400/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,486 | INFO     | extracted standard info from prmon json
[2025-12-13 21:49:32] 2025-12-14 02:49:00,486 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:49:32] 2025-12-14 02:49:00,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:49:32] 2025-12-14 02:49:00,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:49:32] 2025-12-14 02:49:00,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:49:32] 2025-12-14 02:49:00,494 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:49:32] 2025-12-14 02:49:00,495 | INFO     | sum of square deviations: 5141528960.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,497 | INFO     | sum of deviations: -4164722966.9999905
[2025-12-13 21:49:32] 2025-12-14 02:49:00,498 | INFO     | mean x: 1765672772.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,498 | INFO     | mean y: 2494520.3411764707
[2025-12-13 21:49:32] 2025-12-14 02:49:00,498 | INFO     | intersect: 1432718487.3680854
[2025-12-13 21:49:32] 2025-12-14 02:49:00,498 | INFO     | chi2: 2.2912719198184037
[2025-12-13 21:49:32] 2025-12-14 02:49:00,499 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,502 | INFO     | sum of deviations: 12732448870.000004
[2025-12-13 21:49:32] 2025-12-14 02:49:00,502 | INFO     | mean x: 1765672619.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,502 | INFO     | mean y: 2503071.52
[2025-12-13 21:49:32] 2025-12-14 02:49:00,502 | INFO     | intersect: -4637631991.922393
[2025-12-13 21:49:32] 2025-12-14 02:49:00,503 | INFO     | chi2: 1.5211998440962018
[2025-12-13 21:49:32] 2025-12-14 02:49:00,503 | INFO     | current chi2=1.5211998440962018 (change=33.608934367913626 %)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,503 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,506 | INFO     | sum of deviations: 12454216158.000002
[2025-12-13 21:49:32] 2025-12-14 02:49:00,506 | INFO     | mean x: 1765672467.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,506 | INFO     | mean y: 2502922.5836734693
[2025-12-13 21:49:32] 2025-12-14 02:49:00,506 | INFO     | intersect: -4819829028.696414
[2025-12-13 21:49:32] 2025-12-14 02:49:00,507 | INFO     | chi2: 1.5216626080907973
[2025-12-13 21:49:32] 2025-12-14 02:49:00,507 | INFO     | current chi2=1.5216626080907973 (change=-0.030420986196622576 %)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,507 | INFO     | right removable region: 244
[2025-12-13 21:49:32] 2025-12-14 02:49:00,508 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,510 | INFO     | sum of deviations: -40131763024.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,510 | INFO     | mean x: 1765672924.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,511 | INFO     | mean y: 2512839.356
[2025-12-13 21:49:32] 2025-12-14 02:49:00,511 | INFO     | intersect: 14627887332.188519
[2025-12-13 21:49:32] 2025-12-14 02:49:00,511 | INFO     | chi2: 0.963827882759174
[2025-12-13 21:49:32] 2025-12-14 02:49:00,512 | INFO     | current chi2=0.963827882759174 (change=57.934810162751745 %)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,512 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,515 | INFO     | sum of deviations: -44148982165.99999
[2025-12-13 21:49:32] 2025-12-14 02:49:00,515 | INFO     | mean x: 1765673077.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,515 | INFO     | mean y: 2514989.551020408
[2025-12-13 21:49:32] 2025-12-14 02:49:00,515 | INFO     | intersect: 17097217551.891502
[2025-12-13 21:49:32] 2025-12-14 02:49:00,516 | INFO     | chi2: 0.9442047104028024
[2025-12-13 21:49:32] 2025-12-14 02:49:00,516 | INFO     | current chi2=0.9442047104028024 (change=2.0359623027501366 %)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,516 | INFO     | left removable region: 20
[2025-12-13 21:49:32] 2025-12-14 02:49:00,516 | INFO     | sum of square deviations: 3485088600.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,519 | INFO     | sum of deviations: -20050017288.0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,519 | INFO     | mean x: 1765673046.5
[2025-12-13 21:49:32] 2025-12-14 02:49:00,519 | INFO     | mean y: 2520500.625
[2025-12-13 21:49:32] 2025-12-14 02:49:00,519 | INFO     | intersect: 10160590831.256084
[2025-12-13 21:49:32] 2025-12-14 02:49:00,520 | INFO     | chi2: 0.12396074973401733
[2025-12-13 21:49:32] 2025-12-14 02:49:00,520 | INFO     | current memory leak: -5.75 B/s (using 224 data points, chi2=0.12)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,521 | INFO     | could have reported an average CPU frequency of 2552 MHz (12 samples)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,521 | INFO     | ..............................
[2025-12-13 21:49:32] 2025-12-14 02:49:00,521 | INFO     | . Timing measurements:
[2025-12-13 21:49:32] 2025-12-14 02:49:00,521 | INFO     | . get job = 0 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,521 | INFO     | . initial setup = 2 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | . payload setup = 5 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | . stage-in = 0 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | . payload execution = 15505 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | . stage-out = 2 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | . log creation = 0 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,522 | INFO     | ..............................
[2025-12-13 21:49:32] 2025-12-14 02:49:00,680 | INFO     | 
[2025-12-13 21:49:32] 2025-12-14 02:49:00,680 | INFO     | job summary report
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | --------------------------------------------------
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | PanDA job id: 6929266400
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | task id: 47898763
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | errors: (none)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:49:32] 2025-12-14 02:49:00,681 | INFO     | pilot state: finished 
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | transexitcode: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | exeerrorcode: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | exeerrordiag: 
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | exitcode: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | exitmsg: OK
[2025-12-13 21:49:32] 2025-12-14 02:49:00,682 | INFO     | cpuconsumptiontime: 115421 s
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | nevents: 400
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | neventsw: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | pid: 29349
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | pgrp: 29349
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | corecount: 8
[2025-12-13 21:49:32] 2025-12-14 02:49:00,683 | INFO     | event service: False
[2025-12-13 21:49:32] 2025-12-14 02:49:00,684 | INFO     | sizes: {0: 2283125, 1: 2283981, 2: 2283981, 5: 2284271, 12: 2284327, 15514: 2315521, 15517: 2324519, 15518: 2324575, 15525: 2324769}
[2025-12-13 21:49:32] 2025-12-14 02:49:00,684 | INFO     | --------------------------------------------------
[2025-12-13 21:49:32] 2025-12-14 02:49:00,684 | INFO     | 
[2025-12-13 21:49:32] 2025-12-14 02:49:00,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 21:49:32] 2025-12-14 02:49:00,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:49:32] 2025-12-14 02:49:00,708 | INFO     | job 6929266400 has completed (purged errors)
[2025-12-13 21:49:32] 2025-12-14 02:49:00,708 | INFO     | overall cleanup function is called
[2025-12-13 21:49:32] 2025-12-14 02:49:01,716 | INFO     | --- collectZombieJob: --- 10, [29349]
[2025-12-13 21:49:32] 2025-12-14 02:49:01,716 | INFO     | zombie collector waiting for pid 29349
[2025-12-13 21:49:32] 2025-12-14 02:49:01,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:49:32] 2025-12-14 02:49:01,716 | INFO     | collected zombie processes
[2025-12-13 21:49:32] 2025-12-14 02:49:01,716 | INFO     | will attempt to kill all subprocesses of pid=29349
[2025-12-13 21:49:32] 2025-12-14 02:49:01,889 | INFO     | process IDs to be killed: [29349] (in reverse order)
[2025-12-13 21:49:32] 2025-12-14 02:49:01,948 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:49:32] 2025-12-14 02:49:01,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:49:32] 2025-12-14 02:49:01,969 | INFO     | did not find any defunct processes belonging to 29349
[2025-12-13 21:49:32] 2025-12-14 02:49:01,974 | INFO     | did not find any defunct processes belonging to 29349
[2025-12-13 21:49:32] 2025-12-14 02:49:01,974 | INFO     | ready for new job
[2025-12-13 21:49:32] 2025-12-14 02:49:01,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:49:32] 2025-12-14 02:49:01,976 | INFO     | ***************************************
[2025-12-13 21:49:32] 2025-12-14 02:49:01,976 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:49:32] 2025-12-14 02:49:01,976 | INFO     | ***************************************
[2025-12-13 21:49:32] 2025-12-14 02:49:01,976 | INFO     | 
[2025-12-13 21:49:32] 2025-12-14 02:49:01,977 | INFO     | architecture information:
[2025-12-13 21:49:32] 2025-12-14 02:49:01,977 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:49:32] 2025-12-14 02:49:01,991 | INFO     | cat /etc/os-release:
[2025-12-13 21:49:32] NAME="CentOS Linux"
[2025-12-13 21:49:32] VERSION="7 (Core)"
[2025-12-13 21:49:32] ID="centos"
[2025-12-13 21:49:32] ID_LIKE="rhel fedora"
[2025-12-13 21:49:32] VERSION_ID="7"
[2025-12-13 21:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:49:32] ANSI_COLOR="0;31"
[2025-12-13 21:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:49:32] HOME_URL="https://www.centos.org/"
[2025-12-13 21:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:49:32] 
[2025-12-13 21:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:49:32] 
[2025-12-13 21:49:32] 2025-12-14 02:49:01,991 | INFO     | ***************************************
[2025-12-13 21:49:32] 2025-12-14 02:49:02,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 21:49:32] 2025-12-14 02:49:02,515 | INFO     | sufficient remaining disk space (28053602304 B)
[2025-12-13 21:49:32] 2025-12-14 02:49:02,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:49:32] 2025-12-14 02:49:02,516 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:49:32] 2025-12-14 02:49:02,516 | INFO     | update_server=False
[2025-12-13 21:49:32] 2025-12-14 02:49:02,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:49:32] 2025-12-14 02:49:02,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:49:32] 2025-12-14 02:49:02,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 21:49:32] 2025-12-14 02:49:02,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 21:49:32] 2025-12-14 02:49:02,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:49:32] 2025-12-14 02:49:02,574 | INFO     | will abort loop
[2025-12-13 21:49:32] 2025-12-14 02:49:02,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:49:32] 2025-12-14 02:49:02,973 | INFO     | all payload control threads have been joined
[2025-12-13 21:49:32] 2025-12-14 02:49:03,379 | INFO     | all data control threads have been joined
[2025-12-13 21:49:32] 2025-12-14 02:49:03,522 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:03,523 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:03,581 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:03,838 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:03,953 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:03,978 | INFO     | [payload] control thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,010 | INFO     | all job control threads have been joined
[2025-12-13 21:49:32] 2025-12-14 02:49:04,031 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,121 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,371 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,385 | INFO     | [data] control thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,622 | INFO     | [job] validate thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,622 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:04,659 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:49:32] 2025-12-14 02:49:04,948 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:05,013 | INFO     | [job] control thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:08,665 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:49:32] 2025-12-14 02:49:24,910 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:49:32] 2025-12-14 02:49:25,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055641941824)>', '<ExcThread(monitor, started 140054974420736)>']
[2025-12-13 21:49:32] 2025-12-14 02:49:30,282 | INFO     | all workflow threads have been joined
[2025-12-13 21:49:32] 2025-12-14 02:49:30,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:49:32] 2025-12-14 02:49:30,283 | INFO     | traces error code: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:30,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:49:32] 2025-12-14 02:49:32,669 | INFO     | PID=22721 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 21:49:32] 2025-12-14 02:49:32,669 | INFO     | .. there are 3 such processes running
[2025-12-13 21:49:32] 2025-12-14 02:49:32,670 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:49:32] 2025-12-14 02:49:32,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:49:32] 2025-12-14 02:49:32,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:49:32] 2025-12-14 02:49:32,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:49:32] 2025-12-14 02:49:32,671 | INFO     | [monitor] control thread has ended
[2025-12-13 21:49:32] 2025-12-14 02:49:32,778 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:49:32] 2025-12-14 02:49:32,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:49:32] 2025-12-14 02:49:32,783 [wrapper] pilotpid: 22721
[2025-12-13 21:49:32] 2025-12-14 02:49:32,786 [wrapper] Pilot exit status: 0
[2025-12-13 21:49:32] 2025-12-14 02:49:32,795 [wrapper] pandaids: 6929266400
[2025-12-13 21:49:32] 2025-12-14 02:49:32,831 [wrapper] cleanup supervisor_pilot 25863 22722
[2025-12-13 21:49:32] 2025-12-14 02:49:32,834 [wrapper] Test setup, not cleaning
[2025-12-13 21:49:32] 2025-12-14 02:49:32,836 [wrapper] apfmon messages muted
[2025-12-13 21:49:32] 2025-12-14 02:49:32,838 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:49:32] 2025-12-14 02:49:32,840 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:49:32]  *** Error codes and diagnostics ***
[2025-12-13 21:49:32]     "exeErrorCode": 0,
[2025-12-13 21:49:32]     "exeErrorDiag": "",
[2025-12-13 21:49:32]     "pilotErrorCode": 0,
[2025-12-13 21:49:32]     "pilotErrorDiag": "",
[2025-12-13 21:49:32]  *** Listing of results directory ***
[2025-12-13 21:49:32] total 447648
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 21:49:32] -rwx------ 1 boincer umatlas     36322 Dec 13 05:06 runpilot2-wrapper.sh
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:10 queuedata.json
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas       100 Dec 13 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:49:32] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 17:29 run_atlas
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas       105 Dec 13 17:29 job.xml
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas 227120823 Dec 13 17:29 EVNT.47898761._000132.pool.root.1
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:29 start_atlas.sh
[2025-12-13 21:49:32] drwxrwx--x 2 boincer umatlas      4096 Dec 13 17:29 shared
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas    592392 Dec 13 17:29 input.tar.gz
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas         0 Dec 13 17:29 boinc_lockfile
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas      2505 Dec 13 17:29 pandaJob.out
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas        57 Dec 13 17:29 setup.sh.local
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas    991728 Dec 13 17:29 agis_schedconf.cvmfs.json
[2025-12-13 21:49:32] drwx------ 5 boincer umatlas      4096 Dec 13 17:30 pilot3
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 21:47 init_data.xml
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas 222072208 Dec 13 21:48 HITS.47898763._002659.pool.root.1
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas       531 Dec 13 21:48 boinc_task_state.xml
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas      1068 Dec 13 21:48 memory_monitor_summary.json
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas   1516240 Dec 13 21:48 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas    476602 Dec 13 21:48 log.47898763._002659.job.log.tgz.1
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas      7856 Dec 13 21:49 heartbeat.json
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas        29 Dec 13 21:49 wrapper_checkpoint.txt
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 21:49 boinc_mmap_file
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas        95 Dec 13 21:49 pilot_heartbeat.json
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas       820 Dec 13 21:49 pilotlog.txt
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas   2163796 Dec 13 21:49 log.47898763._002659.job.log.1
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas       357 Dec 13 21:49 output.list
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas       620 Dec 13 21:49 runtime_log
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas   2662400 Dec 13 21:49 result.tar.gz
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 21:49 runtime_log.err
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas       663 Dec 13 21:49 jFPODmugbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmD4SKDmnwevbn.diag
[2025-12-13 21:49:32] -rw-r--r-- 1 boincer umatlas     21065 Dec 13 21:49 stderr.txt
[2025-12-13 21:49:32] HITS file was successfully produced:
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas 222072208 Dec 13 21:48 shared/HITS.pool.root.1
[2025-12-13 21:49:32]  *** Contents of shared directory: ***
[2025-12-13 21:49:32] total 441868
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas 227120823 Dec 13 17:29 ATLAS.root_0
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:29 start_atlas.sh
[2025-12-13 21:49:32] -rw-r--r-- 2 boincer umatlas    592392 Dec 13 17:29 input.tar.gz
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas 222072208 Dec 13 21:48 HITS.pool.root.1
[2025-12-13 21:49:32] -rw------- 1 boincer umatlas   2662400 Dec 13 21:49 result.tar.gz
21:49:34 (19016): run_atlas exited; CPU time 115646.643834
21:49:34 (19016): called boinc_finish(0)

</stderr_txt>
]]>

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