Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:03:00 (5448): wrapper (7.7.26015): starting
17:03:00 (5448): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 17:03:00] Arguments: --nthreads 8
[2025-12-13 17:03:00] Threads: 8
[2025-12-13 17:03:00] Checking for CVMFS
[2025-12-13 17:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 17:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 17:03:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 17:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 17:03:00] 2.11.2.0 8814 142716 134312 153973 0 59 16285177 18432000 1833 130560 0 102042281 99.976 5828023 32440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 17:03:00] CVMFS is ok
[2025-12-13 17:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 17:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 17:03:00] Further information can be found at the LHC@home message board.
[2025-12-13 17:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 17:03:00] Checking for apptainer binary...
[2025-12-13 17:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 17:03:00] Running /usr/bin/apptainer --version
[2025-12-13 17:03:00] apptainer version 1.3.2-1.el7
[2025-12-13 17:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 17:03:01] c-206-19.aglt2.org
[2025-12-13 17:03:01] apptainer works
[2025-12-13 17:03:01] Set ATHENA_PROC_NUMBER=8
[2025-12-13 17:03:01] Set ATHENA_CORE_NUMBER=8
[2025-12-13 17:03:01] Starting ATLAS job with PandaID=6929263598
[2025-12-13 17:03:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:22:57]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:22:57] 2025-12-14 02:22:25,152 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.6666666666665
[2025-12-13 21:22:57] 2025-12-14 02:22:25,154 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929263598/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,155 | INFO     | extracted standard info from prmon json
[2025-12-13 21:22:57] 2025-12-14 02:22:25,155 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:22:57] 2025-12-14 02:22:25,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:22:57] 2025-12-14 02:22:25,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:22:57] 2025-12-14 02:22:25,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:22:57] 2025-12-14 02:22:25,159 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:22:57] 2025-12-14 02:22:25,159 | INFO     | sum of square deviations: 5141528960.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,161 | INFO     | sum of deviations: 30587621131.999992
[2025-12-13 21:22:57] 2025-12-14 02:22:25,161 | INFO     | mean x: 1765671164.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,161 | INFO     | mean y: 2468026.505882353
[2025-12-13 21:22:57] 2025-12-14 02:22:25,161 | INFO     | intersect: -10501738218.036875
[2025-12-13 21:22:57] 2025-12-14 02:22:25,161 | INFO     | chi2: 2.237395183412354
[2025-12-13 21:22:57] 2025-12-14 02:22:25,162 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 21:22:57] 2025-12-14 02:22:25,163 | INFO     | sum of deviations: 46444839532.00001
[2025-12-13 21:22:57] 2025-12-14 02:22:25,163 | INFO     | mean x: 1765671011.5
[2025-12-13 21:22:57] 2025-12-14 02:22:25,163 | INFO     | mean y: 2476042.712
[2025-12-13 21:22:57] 2025-12-14 02:22:25,164 | INFO     | intersect: -16923579138.289097
[2025-12-13 21:22:57] 2025-12-14 02:22:25,164 | INFO     | chi2: 1.463199714413706
[2025-12-13 21:22:57] 2025-12-14 02:22:25,164 | INFO     | current chi2=1.463199714413706 (change=34.60253578529149 %)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,164 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | sum of deviations: 45193370852.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | mean x: 1765670859.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | mean y: 2475372.787755102
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | intersect: -17496597632.28264
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | chi2: 1.4636886608273023
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | current chi2=1.4636886608273023 (change=-0.033416245832997606 %)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,166 | INFO     | right removable region: 244
[2025-12-13 21:22:57] 2025-12-14 02:22:25,167 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 21:22:57] 2025-12-14 02:22:25,168 | INFO     | sum of deviations: -8254376741.500001
[2025-12-13 21:22:57] 2025-12-14 02:22:25,168 | INFO     | mean x: 1765671316.5
[2025-12-13 21:22:57] 2025-12-14 02:22:25,168 | INFO     | mean y: 2487828.884
[2025-12-13 21:22:57] 2025-12-14 02:22:25,169 | INFO     | intersect: 3010659710.9115615
[2025-12-13 21:22:57] 2025-12-14 02:22:25,169 | INFO     | chi2: 0.8256552407492247
[2025-12-13 21:22:57] 2025-12-14 02:22:25,169 | INFO     | current chi2=0.8256552407492247 (change=63.09747840388303 %)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,169 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | sum of deviations: -7255317613.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | mean x: 1765671469.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | mean y: 2487266.2285714285
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | intersect: 2811779294.1003385
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | chi2: 0.8099616170970203
[2025-12-13 21:22:57] 2025-12-14 02:22:25,171 | INFO     | current chi2=0.8099616170970203 (change=1.9007477791776046 %)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,172 | INFO     | left removable region: 20
[2025-12-13 21:22:57] 2025-12-14 02:22:25,172 | INFO     | sum of square deviations: 3485088600.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,173 | INFO     | sum of deviations: 8101363640.0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,173 | INFO     | mean x: 1765671438.5
[2025-12-13 21:22:57] 2025-12-14 02:22:25,173 | INFO     | mean y: 2495788.2589285714
[2025-12-13 21:22:57] 2025-12-14 02:22:25,173 | INFO     | intersect: -4101946891.3476663
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | chi2: 0.0008231435303286376
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | current memory leak: 2.32 B/s (using 224 data points, chi2=0.00)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | could have reported an average CPU frequency of 2577 MHz (12 samples)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | ..............................
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | . Timing measurements:
[2025-12-13 21:22:57] 2025-12-14 02:22:25,174 | INFO     | . get job = 0 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . initial setup = 2 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . payload setup = 4 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . stage-in = 0 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . payload execution = 15517 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . stage-out = 2 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | . log creation = 0 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,175 | INFO     | ..............................
[2025-12-13 21:22:57] 2025-12-14 02:22:25,289 | INFO     | 
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | job summary report
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | --------------------------------------------------
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | PanDA job id: 6929263598
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | task id: 47898763
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | errors: (none)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | pilot state: finished 
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | transexitcode: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | exeerrorcode: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | exeerrordiag: 
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | exitcode: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,291 | INFO     | exitmsg: OK
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | cpuconsumptiontime: 118868 s
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | nevents: 400
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | neventsw: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | pid: 15623
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | pgrp: 15623
[2025-12-13 21:22:57] 2025-12-14 02:22:25,292 | INFO     | corecount: 8
[2025-12-13 21:22:57] 2025-12-14 02:22:25,293 | INFO     | event service: False
[2025-12-13 21:22:57] 2025-12-14 02:22:25,293 | INFO     | sizes: {0: 2283951, 1: 2283951, 4: 2284241, 11: 2284269, 15526: 2315507, 15527: 2315506, 15530: 2324688, 15534: 2324744, 15538: 2324938}
[2025-12-13 21:22:57] 2025-12-14 02:22:25,293 | INFO     | --------------------------------------------------
[2025-12-13 21:22:57] 2025-12-14 02:22:25,293 | INFO     | 
[2025-12-13 21:22:57] 2025-12-14 02:22:25,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 21:22:57] 2025-12-14 02:22:25,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | job 6929263598 has completed (purged errors)
[2025-12-13 21:22:57] 2025-12-14 02:22:25,314 | INFO     | overall cleanup function is called
[2025-12-13 21:22:57] 2025-12-14 02:22:26,322 | INFO     | --- collectZombieJob: --- 10, [15623]
[2025-12-13 21:22:57] 2025-12-14 02:22:26,322 | INFO     | zombie collector waiting for pid 15623
[2025-12-13 21:22:57] 2025-12-14 02:22:26,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:22:57] 2025-12-14 02:22:26,322 | INFO     | collected zombie processes
[2025-12-13 21:22:57] 2025-12-14 02:22:26,323 | INFO     | will attempt to kill all subprocesses of pid=15623
[2025-12-13 21:22:57] 2025-12-14 02:22:26,494 | INFO     | process IDs to be killed: [15623] (in reverse order)
[2025-12-13 21:22:57] 2025-12-14 02:22:26,552 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:22:57] 2025-12-14 02:22:26,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:22:57] 2025-12-14 02:22:26,558 | INFO     | did not find any defunct processes belonging to 15623
[2025-12-13 21:22:57] 2025-12-14 02:22:26,563 | INFO     | did not find any defunct processes belonging to 15623
[2025-12-13 21:22:57] 2025-12-14 02:22:26,563 | INFO     | ready for new job
[2025-12-13 21:22:57] 2025-12-14 02:22:26,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:22:57] 2025-12-14 02:22:26,565 | INFO     | ***************************************
[2025-12-13 21:22:57] 2025-12-14 02:22:26,566 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:22:57] 2025-12-14 02:22:26,566 | INFO     | ***************************************
[2025-12-13 21:22:57] 2025-12-14 02:22:26,566 | INFO     | 
[2025-12-13 21:22:57] 2025-12-14 02:22:26,567 | INFO     | architecture information:
[2025-12-13 21:22:57] 2025-12-14 02:22:26,568 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:22:57] 2025-12-14 02:22:26,580 | INFO     | cat /etc/os-release:
[2025-12-13 21:22:57] NAME="CentOS Linux"
[2025-12-13 21:22:57] VERSION="7 (Core)"
[2025-12-13 21:22:57] ID="centos"
[2025-12-13 21:22:57] ID_LIKE="rhel fedora"
[2025-12-13 21:22:57] VERSION_ID="7"
[2025-12-13 21:22:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:22:57] ANSI_COLOR="0;31"
[2025-12-13 21:22:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:22:57] HOME_URL="https://www.centos.org/"
[2025-12-13 21:22:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:22:57] 
[2025-12-13 21:22:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:22:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:22:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:22:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:22:57] 
[2025-12-13 21:22:57] 2025-12-14 02:22:26,581 | INFO     | ***************************************
[2025-12-13 21:22:57] 2025-12-14 02:22:27,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 21:22:57] 2025-12-14 02:22:27,100 | INFO     | sufficient remaining disk space (28036825088 B)
[2025-12-13 21:22:57] 2025-12-14 02:22:27,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:22:57] 2025-12-14 02:22:27,101 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:22:57] 2025-12-14 02:22:27,101 | INFO     | update_server=False
[2025-12-13 21:22:57] 2025-12-14 02:22:27,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:22:57] 2025-12-14 02:22:27,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:22:57] 2025-12-14 02:22:27,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:22:57] 2025-12-14 02:22:27,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 21:22:57] 2025-12-14 02:22:27,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 21:22:57] 2025-12-14 02:22:27,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:22:57] 2025-12-14 02:22:27,109 | INFO     | will abort loop
[2025-12-13 21:22:57] 2025-12-14 02:22:27,460 | INFO     | all job control threads have been joined
[2025-12-13 21:22:57] 2025-12-14 02:22:27,467 | INFO     | all data control threads have been joined
[2025-12-13 21:22:57] 2025-12-14 02:22:27,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:22:57] 2025-12-14 02:22:27,853 | INFO     | all payload control threads have been joined
[2025-12-13 21:22:57] 2025-12-14 02:22:28,104 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,106 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,115 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,134 | INFO     | [job] validate thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,142 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,215 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,465 | INFO     | [job] control thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,472 | INFO     | [data] control thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,604 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,859 | INFO     | [payload] control thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:28,997 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:29,173 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:29,222 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:29,559 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:31,108 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:37,195 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:22:57] 2025-12-14 02:22:37,471 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:22:57] 2025-12-14 02:22:38,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:22:57] 2025-12-14 02:22:38,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353682843456)>', '<ExcThread(monitor, started 140352946169600)>']
[2025-12-13 21:22:57] 2025-12-14 02:22:43,927 | INFO     | all workflow threads have been joined
[2025-12-13 21:22:57] 2025-12-14 02:22:43,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:22:57] 2025-12-14 02:22:43,927 | INFO     | traces error code: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:43,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:22:57] 2025-12-14 02:22:56,808 | INFO     | PID=9201 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 21:22:57] 2025-12-14 02:22:56,808 | INFO     | .. there are 3 such processes running
[2025-12-13 21:22:57] 2025-12-14 02:22:56,809 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:22:57] 2025-12-14 02:22:56,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:22:57] 2025-12-14 02:22:56,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:22:57] 2025-12-14 02:22:56,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:22:57] 2025-12-14 02:22:56,809 | INFO     | [monitor] control thread has ended
[2025-12-13 21:22:57] 2025-12-14 02:22:56,906 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:22:57] 2025-12-14 02:22:56,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:22:57] 2025-12-14 02:22:56,911 [wrapper] pilotpid: 9201
[2025-12-13 21:22:57] 2025-12-14 02:22:56,913 [wrapper] Pilot exit status: 0
[2025-12-13 21:22:57] 2025-12-14 02:22:56,922 [wrapper] pandaids: 6929263598
[2025-12-13 21:22:57] 2025-12-14 02:22:56,948 [wrapper] cleanup supervisor_pilot  5824 9202
[2025-12-13 21:22:57] 2025-12-14 02:22:56,951 [wrapper] Test setup, not cleaning
[2025-12-13 21:22:57] 2025-12-14 02:22:56,953 [wrapper] apfmon messages muted
[2025-12-13 21:22:57] 2025-12-14 02:22:56,955 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:22:57] 2025-12-14 02:22:56,957 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:22:57]  *** Error codes and diagnostics ***
[2025-12-13 21:22:57]     "exeErrorCode": 0,
[2025-12-13 21:22:57]     "exeErrorDiag": "",
[2025-12-13 21:22:57]     "pilotErrorCode": 0,
[2025-12-13 21:22:57]     "pilotErrorDiag": "",
[2025-12-13 21:22:57]  *** Listing of results directory ***
[2025-12-13 21:22:57] total 443580
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 21:22:57] -rwx------ 1 boincer umatlas     36322 Dec 13 05:05 runpilot2-wrapper.sh
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:07 queuedata.json
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas       100 Dec 13 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:22:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 17:02 run_atlas
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas       105 Dec 13 17:02 job.xml
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas 223021493 Dec 13 17:03 EVNT.47898761._000087.pool.root.1
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 17:03 input.tar.gz
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:03 start_atlas.sh
[2025-12-13 21:22:57] drwxrwx--x 2 boincer umatlas      4096 Dec 13 17:03 shared
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas         0 Dec 13 17:03 boinc_lockfile
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas      2504 Dec 13 17:03 pandaJob.out
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas        57 Dec 13 17:03 setup.sh.local
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas    991736 Dec 13 17:03 agis_schedconf.cvmfs.json
[2025-12-13 21:22:57] drwx------ 5 boincer umatlas      4096 Dec 13 17:03 pilot3
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas 221955668 Dec 13 21:21 HITS.47898763._001543.pool.root.1
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas       531 Dec 13 21:21 boinc_task_state.xml
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 21:21 init_data.xml
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas      1054 Dec 13 21:22 memory_monitor_summary.json
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas   1516240 Dec 13 21:22 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas    492046 Dec 13 21:22 log.47898763._001543.job.log.tgz.1
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas      7855 Dec 13 21:22 heartbeat.json
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 21:22 boinc_mmap_file
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas        29 Dec 13 21:22 wrapper_checkpoint.txt
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas       819 Dec 13 21:22 pilotlog.txt
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas        95 Dec 13 21:22 pilot_heartbeat.json
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas   2175759 Dec 13 21:22 log.47898763._001543.job.log.1
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas       357 Dec 13 21:22 output.list
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas       620 Dec 13 21:22 runtime_log
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas   2682880 Dec 13 21:22 result.tar.gz
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas       663 Dec 13 21:22 SwjMDmYgbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmsOKDmCbcCAn.diag
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 21:22 runtime_log.err
[2025-12-13 21:22:57] -rw-r--r-- 1 boincer umatlas     21064 Dec 13 21:22 stderr.txt
[2025-12-13 21:22:57] HITS file was successfully produced:
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas 221955668 Dec 13 21:21 shared/HITS.pool.root.1
[2025-12-13 21:22:57]  *** Contents of shared directory: ***
[2025-12-13 21:22:57] total 437772
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas 223021493 Dec 13 17:03 ATLAS.root_0
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 17:03 input.tar.gz
[2025-12-13 21:22:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:03 start_atlas.sh
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas 221955668 Dec 13 21:21 HITS.pool.root.1
[2025-12-13 21:22:57] -rw------- 1 boincer umatlas   2682880 Dec 13 21:22 result.tar.gz
21:22:58 (5448): run_atlas exited; CPU time 119057.181798
21:22:58 (5448): called boinc_finish(0)

</stderr_txt>
]]>

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