Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:41 (5655): wrapper (7.7.26015): starting
17:00:41 (5655): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 17:00:41] Arguments: --nthreads 8
[2025-12-13 17:00:41] Threads: 8
[2025-12-13 17:00:41] Checking for CVMFS
[2025-12-13 17:00:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 17:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 17:00:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 17:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 17:00:41] 2.11.2.0 11495 142753 138064 153973 2 59 15657151 18432001 1833 130560 0 99211208 99.977 5801167 26410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 17:00:41] CVMFS is ok
[2025-12-13 17:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 17:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 17:00:41] Further information can be found at the LHC@home message board.
[2025-12-13 17:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 17:00:41] Checking for apptainer binary...
[2025-12-13 17:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 17:00:41] Running /usr/bin/apptainer --version
[2025-12-13 17:00:41] apptainer version 1.3.2-1.el7
[2025-12-13 17:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 17:00:42] c-206-31.aglt2.org
[2025-12-13 17:00:42] apptainer works
[2025-12-13 17:00:42] Set ATHENA_PROC_NUMBER=8
[2025-12-13 17:00:42] Set ATHENA_CORE_NUMBER=8
[2025-12-13 17:00:42] Starting ATLAS job with PandaID=6929263608
[2025-12-13 17:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:17:35]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:17:35] 2025-12-14 02:17:03,494 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2477.9166666666665
[2025-12-13 21:17:35] 2025-12-14 02:17:03,497 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929263608/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,497 | INFO     | extracted standard info from prmon json
[2025-12-13 21:17:35] 2025-12-14 02:17:03,498 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:17:35] 2025-12-14 02:17:03,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:17:35] 2025-12-14 02:17:03,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:17:35] 2025-12-14 02:17:03,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:17:35] 2025-12-14 02:17:03,502 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:17:35] 2025-12-14 02:17:03,502 | INFO     | sum of square deviations: 4962187923.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,504 | INFO     | sum of deviations: 15135617710.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,504 | INFO     | mean x: 1765670933.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,504 | INFO     | mean y: 2469087.876984127
[2025-12-13 21:17:35] 2025-12-14 02:17:03,504 | INFO     | intersect: -5383163352.226326
[2025-12-13 21:17:35] 2025-12-14 02:17:03,505 | INFO     | chi2: 2.036166912941548
[2025-12-13 21:17:35] 2025-12-14 02:17:03,505 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,508 | INFO     | sum of deviations: 31280710879.000004
[2025-12-13 21:17:35] 2025-12-14 02:17:03,508 | INFO     | mean x: 1765670781.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,508 | INFO     | mean y: 2477450.1821862347
[2025-12-13 21:17:35] 2025-12-14 02:17:03,508 | INFO     | intersect: -11817704975.107971
[2025-12-13 21:17:35] 2025-12-14 02:17:03,509 | INFO     | chi2: 1.2582438973393584
[2025-12-13 21:17:35] 2025-12-14 02:17:03,509 | INFO     | current chi2=1.2582438973393584 (change=38.20526748852643 %)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,510 | INFO     | sum of square deviations: 4394577280.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,512 | INFO     | sum of deviations: 30498183633.499996
[2025-12-13 21:17:35] 2025-12-14 02:17:03,512 | INFO     | mean x: 1765670628.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,512 | INFO     | mean y: 2477020.9545454546
[2025-12-13 21:17:35] 2025-12-14 02:17:03,513 | INFO     | intersect: -12251203737.651548
[2025-12-13 21:17:35] 2025-12-14 02:17:03,513 | INFO     | chi2: 1.2587159085217872
[2025-12-13 21:17:35] 2025-12-14 02:17:03,513 | INFO     | current chi2=1.2587159085217872 (change=-0.037513488714460544 %)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,513 | INFO     | right removable region: 241
[2025-12-13 21:17:35] 2025-12-14 02:17:03,514 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,516 | INFO     | sum of deviations: -16783860981.999998
[2025-12-13 21:17:35] 2025-12-14 02:17:03,517 | INFO     | mean x: 1765671086.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,517 | INFO     | mean y: 2485716.696356275
[2025-12-13 21:17:35] 2025-12-14 02:17:03,517 | INFO     | intersect: 6344679589.614662
[2025-12-13 21:17:35] 2025-12-14 02:17:03,517 | INFO     | chi2: 0.8066433177057727
[2025-12-13 21:17:35] 2025-12-14 02:17:03,518 | INFO     | current chi2=0.8066433177057727 (change=60.384224270668675 %)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,518 | INFO     | sum of square deviations: 4394577280.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,521 | INFO     | sum of deviations: -14777580132.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,521 | INFO     | mean x: 1765671238.5
[2025-12-13 21:17:35] 2025-12-14 02:17:03,521 | INFO     | mean y: 2484604.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,521 | INFO     | intersect: 5939881206.280876
[2025-12-13 21:17:35] 2025-12-14 02:17:03,522 | INFO     | chi2: 0.8020858444733351
[2025-12-13 21:17:35] 2025-12-14 02:17:03,522 | INFO     | current chi2=0.8020858444733351 (change=0.5649923742503455 %)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,522 | INFO     | left removable region: 20
[2025-12-13 21:17:35] 2025-12-14 02:17:03,522 | INFO     | sum of square deviations: 3346927870.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,524 | INFO     | sum of deviations: 3760224524.999998
[2025-12-13 21:17:35] 2025-12-14 02:17:03,525 | INFO     | mean x: 1765671208.0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,525 | INFO     | mean y: 2491886.108597285
[2025-12-13 21:17:35] 2025-12-14 02:17:03,525 | INFO     | intersect: -1981213899.402691
[2025-12-13 21:17:35] 2025-12-14 02:17:03,525 | INFO     | chi2: 7.653270233047257e-05
[2025-12-13 21:17:35] 2025-12-14 02:17:03,526 | INFO     | current memory leak: 1.12 B/s (using 221 data points, chi2=0.00)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,526 | INFO     | could have reported an average CPU frequency of 2585 MHz (12 samples)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | ..............................
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | . Timing measurements:
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | . get job = 0 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | . initial setup = 2 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | . payload setup = 4 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,527 | INFO     | . stage-in = 0 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,528 | INFO     | . payload execution = 15339 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,528 | INFO     | . stage-out = 2 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,528 | INFO     | . log creation = 0 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,528 | INFO     | ..............................
[2025-12-13 21:17:35] 2025-12-14 02:17:03,656 | INFO     | 
[2025-12-13 21:17:35] 2025-12-14 02:17:03,656 | INFO     | job summary report
[2025-12-13 21:17:35] 2025-12-14 02:17:03,656 | INFO     | --------------------------------------------------
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | PanDA job id: 6929263608
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | task id: 47898763
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | errors: (none)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | pilot state: finished 
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | transexitcode: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | exeerrorcode: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | exeerrordiag: 
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | exitcode: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,657 | INFO     | exitmsg: OK
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | cpuconsumptiontime: 117795 s
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | nevents: 400
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | neventsw: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | pid: 15815
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | pgrp: 15815
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | corecount: 8
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | event service: False
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | sizes: {0: 2283835, 1: 2283977, 4: 2284239, 11: 2284267, 15347: 2315420, 15348: 2315419, 15350: 2324601, 15351: 2324657, 15355: 2324851}
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | --------------------------------------------------
[2025-12-13 21:17:35] 2025-12-14 02:17:03,658 | INFO     | 
[2025-12-13 21:17:35] 2025-12-14 02:17:03,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 21:17:35] 2025-12-14 02:17:03,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:17:35] 2025-12-14 02:17:03,677 | INFO     | job 6929263608 has completed (purged errors)
[2025-12-13 21:17:35] 2025-12-14 02:17:03,678 | INFO     | overall cleanup function is called
[2025-12-13 21:17:35] 2025-12-14 02:17:04,684 | INFO     | --- collectZombieJob: --- 10, [15815]
[2025-12-13 21:17:35] 2025-12-14 02:17:04,684 | INFO     | zombie collector waiting for pid 15815
[2025-12-13 21:17:35] 2025-12-14 02:17:04,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:17:35] 2025-12-14 02:17:04,684 | INFO     | collected zombie processes
[2025-12-13 21:17:35] 2025-12-14 02:17:04,684 | INFO     | will attempt to kill all subprocesses of pid=15815
[2025-12-13 21:17:35] 2025-12-14 02:17:04,852 | INFO     | process IDs to be killed: [15815] (in reverse order)
[2025-12-13 21:17:35] 2025-12-14 02:17:04,914 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:17:35] 2025-12-14 02:17:04,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:17:35] 2025-12-14 02:17:04,920 | INFO     | did not find any defunct processes belonging to 15815
[2025-12-13 21:17:35] 2025-12-14 02:17:04,925 | INFO     | did not find any defunct processes belonging to 15815
[2025-12-13 21:17:35] 2025-12-14 02:17:04,925 | INFO     | ready for new job
[2025-12-13 21:17:35] 2025-12-14 02:17:04,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:17:35] 2025-12-14 02:17:04,927 | INFO     | ***************************************
[2025-12-13 21:17:35] 2025-12-14 02:17:04,928 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:17:35] 2025-12-14 02:17:04,928 | INFO     | ***************************************
[2025-12-13 21:17:35] 2025-12-14 02:17:04,928 | INFO     | 
[2025-12-13 21:17:35] 2025-12-14 02:17:04,929 | INFO     | architecture information:
[2025-12-13 21:17:35] 2025-12-14 02:17:04,930 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:17:35] 2025-12-14 02:17:04,942 | INFO     | cat /etc/os-release:
[2025-12-13 21:17:35] NAME="CentOS Linux"
[2025-12-13 21:17:35] VERSION="7 (Core)"
[2025-12-13 21:17:35] ID="centos"
[2025-12-13 21:17:35] ID_LIKE="rhel fedora"
[2025-12-13 21:17:35] VERSION_ID="7"
[2025-12-13 21:17:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:17:35] ANSI_COLOR="0;31"
[2025-12-13 21:17:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:17:35] HOME_URL="https://www.centos.org/"
[2025-12-13 21:17:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:17:35] 
[2025-12-13 21:17:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:17:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:17:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:17:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:17:35] 
[2025-12-13 21:17:35] 2025-12-14 02:17:04,942 | INFO     | ***************************************
[2025-12-13 21:17:35] 2025-12-14 02:17:05,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 21:17:35] 2025-12-14 02:17:05,459 | INFO     | sufficient remaining disk space (28088205312 B)
[2025-12-13 21:17:35] 2025-12-14 02:17:05,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:17:35] 2025-12-14 02:17:05,459 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:17:35] 2025-12-14 02:17:05,459 | INFO     | update_server=False
[2025-12-13 21:17:35] 2025-12-14 02:17:05,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:17:35] 2025-12-14 02:17:05,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:17:35] 2025-12-14 02:17:05,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:17:35] 2025-12-14 02:17:05,462 | INFO     | all job control threads have been joined
[2025-12-13 21:17:35] 2025-12-14 02:17:05,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:17:35] 2025-12-14 02:17:05,581 | INFO     | all payload control threads have been joined
[2025-12-13 21:17:35] 2025-12-14 02:17:05,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 21:17:35] 2025-12-14 02:17:05,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 21:17:35] 2025-12-14 02:17:05,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:17:35] 2025-12-14 02:17:05,583 | INFO     | will abort loop
[2025-12-13 21:17:35] 2025-12-14 02:17:06,137 | INFO     | all data control threads have been joined
[2025-12-13 21:17:35] 2025-12-14 02:17:06,465 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,466 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,467 | INFO     | [job] control thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,586 | INFO     | [payload] control thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,588 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,709 | INFO     | [job] validate thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:06,709 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,100 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,122 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,138 | INFO     | [data] control thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,221 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,345 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,466 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:07,892 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:09,474 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:16,256 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:17:35] 2025-12-14 02:17:17,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:17:35] 2025-12-14 02:17:18,331 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:17:35] 2025-12-14 02:17:18,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755904620352)>', '<ExcThread(monitor, started 139755308164864)>']
[2025-12-13 21:17:35] 2025-12-14 02:17:23,832 | INFO     | all workflow threads have been joined
[2025-12-13 21:17:35] 2025-12-14 02:17:23,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:17:35] 2025-12-14 02:17:23,832 | INFO     | traces error code: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:23,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:17:35] 2025-12-14 02:17:35,363 | INFO     | PID=9319 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 21:17:35] 2025-12-14 02:17:35,363 | INFO     | .. there are 3 such processes running
[2025-12-13 21:17:35] 2025-12-14 02:17:35,364 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:17:35] 2025-12-14 02:17:35,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:17:35] 2025-12-14 02:17:35,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:17:35] 2025-12-14 02:17:35,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:17:35] 2025-12-14 02:17:35,365 | INFO     | [monitor] control thread has ended
[2025-12-13 21:17:35] 2025-12-14 02:17:35,460 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:17:35] 2025-12-14 02:17:35,463 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:17:35] 2025-12-14 02:17:35,465 [wrapper] pilotpid: 9319
[2025-12-13 21:17:35] 2025-12-14 02:17:35,467 [wrapper] Pilot exit status: 0
[2025-12-13 21:17:35] 2025-12-14 02:17:35,476 [wrapper] pandaids: 6929263608
[2025-12-13 21:17:35] 2025-12-14 02:17:35,514 [wrapper] cleanup supervisor_pilot  9692 9320
[2025-12-13 21:17:35] 2025-12-14 02:17:35,516 [wrapper] Test setup, not cleaning
[2025-12-13 21:17:35] 2025-12-14 02:17:35,518 [wrapper] apfmon messages muted
[2025-12-13 21:17:35] 2025-12-14 02:17:35,520 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:17:35] 2025-12-14 02:17:35,523 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:17:35]  *** Error codes and diagnostics ***
[2025-12-13 21:17:35]     "exeErrorCode": 0,
[2025-12-13 21:17:35]     "exeErrorDiag": "",
[2025-12-13 21:17:35]     "pilotErrorCode": 0,
[2025-12-13 21:17:35]     "pilotErrorDiag": "",
[2025-12-13 21:17:35]  *** Listing of results directory ***
[2025-12-13 21:17:35] total 439024
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 21:17:35] -rwx------ 1 boincer umatlas     36322 Dec 13 05:05 runpilot2-wrapper.sh
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:07 queuedata.json
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas       100 Dec 13 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:17:35] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 17:00 run_atlas
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas       105 Dec 13 17:00 job.xml
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas 223682685 Dec 13 17:00 EVNT.47898761._000088.pool.root.1
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:00 start_atlas.sh
[2025-12-13 21:17:35] drwxrwx--x 2 boincer umatlas      4096 Dec 13 17:00 shared
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 17:00 input.tar.gz
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas         0 Dec 13 17:00 boinc_lockfile
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas      2503 Dec 13 17:00 pandaJob.out
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas        57 Dec 13 17:00 setup.sh.local
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas    991736 Dec 13 17:00 agis_schedconf.cvmfs.json
[2025-12-13 21:17:35] drwx------ 5 boincer umatlas      4096 Dec 13 17:00 pilot3
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas      5954 Dec 13 21:09 init_data.xml
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas 216732034 Dec 13 21:16 HITS.47898763._001553.pool.root.1
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas       532 Dec 13 21:16 boinc_task_state.xml
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas      1055 Dec 13 21:16 memory_monitor_summary.json
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas   1516240 Dec 13 21:16 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas    467726 Dec 13 21:16 log.47898763._001553.job.log.tgz.1
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas      7852 Dec 13 21:17 heartbeat.json
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 21:17 boinc_mmap_file
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas        29 Dec 13 21:17 wrapper_checkpoint.txt
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas        95 Dec 13 21:17 pilot_heartbeat.json
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas       819 Dec 13 21:17 pilotlog.txt
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas   2141073 Dec 13 21:17 log.47898763._001553.job.log.1
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas       357 Dec 13 21:17 output.list
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas       620 Dec 13 21:17 runtime_log
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas   2631680 Dec 13 21:17 result.tar.gz
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 21:17 runtime_log.err
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas       663 Dec 13 21:17 BUwMDmYgbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvsOKDmH4IpPo.diag
[2025-12-13 21:17:35] -rw-r--r-- 1 boincer umatlas     21076 Dec 13 21:17 stderr.txt
[2025-12-13 21:17:35] HITS file was successfully produced:
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas 216732034 Dec 13 21:16 shared/HITS.pool.root.1
[2025-12-13 21:17:35]  *** Contents of shared directory: ***
[2025-12-13 21:17:35] total 433276
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas 223682685 Dec 13 17:00 ATLAS.root_0
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 17:00 start_atlas.sh
[2025-12-13 21:17:35] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 17:00 input.tar.gz
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas 216732034 Dec 13 21:16 HITS.pool.root.1
[2025-12-13 21:17:35] -rw------- 1 boincer umatlas   2631680 Dec 13 21:17 result.tar.gz
21:17:36 (5655): run_atlas exited; CPU time 118008.908179
21:17:36 (5655): called boinc_finish(0)

</stderr_txt>
]]>

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