Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:22:29 (2591): wrapper (7.7.26015): starting
16:22:29 (2591): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 16:22:29] Arguments: --nthreads 8
[2025-12-13 16:22:29] Threads: 8
[2025-12-13 16:22:29] Checking for CVMFS
[2025-12-13 16:22:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:22:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:22:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:22:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:22:29] 2.11.2.0 3643 90898 129824 153973 0 57 17144565 18432001 1833 130560 0 56014155 99.980 3468570 29304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 16:22:29] CVMFS is ok
[2025-12-13 16:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:22:29] Further information can be found at the LHC@home message board.
[2025-12-13 16:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:22:29] Checking for apptainer binary...
[2025-12-13 16:22:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:22:29] Running /usr/bin/apptainer --version
[2025-12-13 16:22:29] apptainer version 1.3.2-1.el7
[2025-12-13 16:22:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:22:30] c-206-15.aglt2.org
[2025-12-13 16:22:30] apptainer works
[2025-12-13 16:22:30] Set ATHENA_PROC_NUMBER=8
[2025-12-13 16:22:30] Set ATHENA_CORE_NUMBER=8
[2025-12-13 16:22:30] Starting ATLAS job with PandaID=6929275678
[2025-12-13 16:22:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:30:12]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:30:12] 2025-12-14 01:29:39,221 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2477.875
[2025-12-13 20:30:12] 2025-12-14 01:29:39,225 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929275678/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,226 | INFO     | extracted standard info from prmon json
[2025-12-13 20:30:12] 2025-12-14 01:29:39,226 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:30:12] 2025-12-14 01:29:39,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:30:12] 2025-12-14 01:29:39,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:30:12] 2025-12-14 01:29:39,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:30:12] 2025-12-14 01:29:39,234 | INFO     | fitting pss+swap vs Time
[2025-12-13 20:30:12] 2025-12-14 01:29:39,235 | INFO     | sum of square deviations: 4449281562.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,237 | INFO     | sum of deviations: -43738390190.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,237 | INFO     | mean x: 1765668368.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,237 | INFO     | mean y: 2508207.7942386833
[2025-12-13 20:30:12] 2025-12-14 01:29:39,238 | INFO     | intersect: 17359803076.543774
[2025-12-13 20:30:12] 2025-12-14 01:29:39,238 | INFO     | chi2: 2.4073768562487956
[2025-12-13 20:30:12] 2025-12-14 01:29:39,239 | INFO     | sum of square deviations: 4180243959.5
[2025-12-13 20:30:12] 2025-12-14 01:29:39,241 | INFO     | sum of deviations: -26554224515.999996
[2025-12-13 20:30:12] 2025-12-14 01:29:39,241 | INFO     | mean x: 1765668215.5
[2025-12-13 20:30:12] 2025-12-14 01:29:39,241 | INFO     | mean y: 2517797.0588235296
[2025-12-13 20:30:12] 2025-12-14 01:29:39,241 | INFO     | intersect: 11218597688.424805
[2025-12-13 20:30:12] 2025-12-14 01:29:39,242 | INFO     | chi2: 1.6350511894352846
[2025-12-13 20:30:12] 2025-12-14 01:29:39,242 | INFO     | current chi2=1.6350511894352846 (change=32.08162713738797 %)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,243 | INFO     | sum of square deviations: 3922276332.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,245 | INFO     | sum of deviations: -25661612980.000004
[2025-12-13 20:30:12] 2025-12-14 01:29:39,245 | INFO     | mean x: 1765668063.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,245 | INFO     | mean y: 2518324.8154506437
[2025-12-13 20:30:12] 2025-12-14 01:29:39,245 | INFO     | intersect: 11554455681.750317
[2025-12-13 20:30:12] 2025-12-14 01:29:39,246 | INFO     | chi2: 1.6336260874525907
[2025-12-13 20:30:12] 2025-12-14 01:29:39,246 | INFO     | current chi2=1.6336260874525907 (change=0.08715947194204102 %)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,246 | INFO     | right removable region: 232
[2025-12-13 20:30:12] 2025-12-14 01:29:39,247 | INFO     | sum of square deviations: 4180243959.5
[2025-12-13 20:30:12] 2025-12-14 01:29:39,249 | INFO     | sum of deviations: -78616092461.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,249 | INFO     | mean x: 1765668520.5
[2025-12-13 20:30:12] 2025-12-14 01:29:39,249 | INFO     | mean y: 2527782.831932773
[2025-12-13 20:30:12] 2025-12-14 01:29:39,250 | INFO     | intersect: 33208714074.33923
[2025-12-13 20:30:12] 2025-12-14 01:29:39,250 | INFO     | chi2: 1.033450138579695
[2025-12-13 20:30:12] 2025-12-14 01:29:39,250 | INFO     | current chi2=1.033450138579695 (change=57.071526383699236 %)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,251 | INFO     | sum of square deviations: 3922276332.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,253 | INFO     | sum of deviations: -77125210920.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,253 | INFO     | mean x: 1765668673.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,253 | INFO     | mean y: 2526870.7682403433
[2025-12-13 20:30:12] 2025-12-14 01:29:39,254 | INFO     | intersect: 34721541364.71224
[2025-12-13 20:30:12] 2025-12-14 01:29:39,254 | INFO     | chi2: 1.0167635842298606
[2025-12-13 20:30:12] 2025-12-14 01:29:39,254 | INFO     | current chi2=1.0167635842298606 (change=1.614645325101736 %)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,254 | INFO     | left removable region: 20
[2025-12-13 20:30:12] 2025-12-14 01:29:39,255 | INFO     | sum of square deviations: 2954447953.0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,257 | INFO     | sum of deviations: -45546410364.99999
[2025-12-13 20:30:12] 2025-12-14 01:29:39,257 | INFO     | mean x: 1765668642.5
[2025-12-13 20:30:12] 2025-12-14 01:29:39,257 | INFO     | mean y: 2529697.245283019
[2025-12-13 20:30:12] 2025-12-14 01:29:39,257 | INFO     | intersect: 27222460404.861126
[2025-12-13 20:30:12] 2025-12-14 01:29:39,258 | INFO     | chi2: 0.20896188852963957
[2025-12-13 20:30:12] 2025-12-14 01:29:39,258 | INFO     | current memory leak: -15.42 B/s (using 212 data points, chi2=0.21)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,259 | INFO     | could have reported an average CPU frequency of 2568 MHz (12 samples)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,259 | INFO     | ..............................
[2025-12-13 20:30:12] 2025-12-14 01:29:39,259 | INFO     | . Timing measurements:
[2025-12-13 20:30:12] 2025-12-14 01:29:39,259 | INFO     | . get job = 0 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . initial setup = 2 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . payload setup = 5 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . stage-in = 0 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . payload execution = 14782 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . stage-out = 2 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | . log creation = 0 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,260 | INFO     | ..............................
[2025-12-13 20:30:12] 2025-12-14 01:29:39,418 | INFO     | 
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | job summary report
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | --------------------------------------------------
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | PanDA job id: 6929275678
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | task id: 47898836
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | errors: (none)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:30:12] 2025-12-14 01:29:39,420 | INFO     | pilot state: finished 
[2025-12-13 20:30:12] 2025-12-14 01:29:39,420 | INFO     | transexitcode: 0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,420 | INFO     | exeerrorcode: 0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,420 | INFO     | exeerrordiag: 
[2025-12-13 20:30:12] 2025-12-14 01:29:39,420 | INFO     | exitcode: 0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | exitmsg: OK
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | cpuconsumptiontime: 113017 s
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | nevents: 400
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | neventsw: 0
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | pid: 12898
[2025-12-13 20:30:12] 2025-12-14 01:29:39,421 | INFO     | pgrp: 12898
[2025-12-13 20:30:12] 2025-12-14 01:29:39,422 | INFO     | corecount: 8
[2025-12-13 20:30:12] 2025-12-14 01:29:39,422 | INFO     | event service: False
[2025-12-13 20:30:12] 2025-12-14 01:29:39,422 | INFO     | sizes: {0: 2283824, 1: 2284023, 4: 2284285, 12: 2284313, 14791: 2315298, 14794: 2324324, 14797: 2324508, 14803: 2324702}
[2025-12-13 20:30:12] 2025-12-14 01:29:39,422 | INFO     | --------------------------------------------------
[2025-12-13 20:30:12] 2025-12-14 01:29:39,422 | INFO     | 
[2025-12-13 20:30:12] 2025-12-14 01:29:39,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 20:30:12] 2025-12-14 01:29:39,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | job 6929275678 has completed (purged errors)
[2025-12-13 20:30:12] 2025-12-14 01:29:39,441 | INFO     | overall cleanup function is called
[2025-12-13 20:30:12] 2025-12-14 01:29:40,449 | INFO     | --- collectZombieJob: --- 10, [12898]
[2025-12-13 20:30:12] 2025-12-14 01:29:40,449 | INFO     | zombie collector waiting for pid 12898
[2025-12-13 20:30:12] 2025-12-14 01:29:40,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:30:12] 2025-12-14 01:29:40,449 | INFO     | collected zombie processes
[2025-12-13 20:30:12] 2025-12-14 01:29:40,449 | INFO     | will attempt to kill all subprocesses of pid=12898
[2025-12-13 20:30:12] 2025-12-14 01:29:40,618 | INFO     | process IDs to be killed: [12898] (in reverse order)
[2025-12-13 20:30:12] 2025-12-14 01:29:40,667 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:30:12] 2025-12-14 01:29:40,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:30:12] 2025-12-14 01:29:40,670 | INFO     | did not find any defunct processes belonging to 12898
[2025-12-13 20:30:12] 2025-12-14 01:29:40,672 | INFO     | did not find any defunct processes belonging to 12898
[2025-12-13 20:30:12] 2025-12-14 01:29:40,673 | INFO     | ready for new job
[2025-12-13 20:30:12] 2025-12-14 01:29:40,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:30:12] 2025-12-14 01:29:40,674 | INFO     | ***************************************
[2025-12-13 20:30:12] 2025-12-14 01:29:40,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:30:12] 2025-12-14 01:29:40,674 | INFO     | ***************************************
[2025-12-13 20:30:12] 2025-12-14 01:29:40,674 | INFO     | 
[2025-12-13 20:30:12] 2025-12-14 01:29:40,675 | INFO     | architecture information:
[2025-12-13 20:30:12] 2025-12-14 01:29:40,679 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:30:12] 2025-12-14 01:29:40,701 | INFO     | cat /etc/os-release:
[2025-12-13 20:30:12] NAME="CentOS Linux"
[2025-12-13 20:30:12] VERSION="7 (Core)"
[2025-12-13 20:30:12] ID="centos"
[2025-12-13 20:30:12] ID_LIKE="rhel fedora"
[2025-12-13 20:30:12] VERSION_ID="7"
[2025-12-13 20:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:30:12] ANSI_COLOR="0;31"
[2025-12-13 20:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:30:12] HOME_URL="https://www.centos.org/"
[2025-12-13 20:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:30:12] 
[2025-12-13 20:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:30:12] 
[2025-12-13 20:30:12] 2025-12-14 01:29:40,701 | INFO     | ***************************************
[2025-12-13 20:30:12] 2025-12-14 01:29:41,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 20:30:12] 2025-12-14 01:29:41,218 | INFO     | sufficient remaining disk space (28092399616 B)
[2025-12-13 20:30:12] 2025-12-14 01:29:41,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:30:12] 2025-12-14 01:29:41,219 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:30:12] 2025-12-14 01:29:41,219 | INFO     | update_server=False
[2025-12-13 20:30:12] 2025-12-14 01:29:41,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:30:12] 2025-12-14 01:29:41,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:30:12] 2025-12-14 01:29:41,398 | INFO     | all payload control threads have been joined
[2025-12-13 20:30:12] 2025-12-14 01:29:41,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:30:12] 2025-12-14 01:29:41,588 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 20:30:12] 2025-12-14 01:29:41,588 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 20:30:12] 2025-12-14 01:29:41,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:30:12] 2025-12-14 01:29:41,588 | INFO     | will abort loop
[2025-12-13 20:30:12] 2025-12-14 01:29:41,950 | INFO     | all data control threads have been joined
[2025-12-13 20:30:12] 2025-12-14 01:29:42,216 | INFO     | all job control threads have been joined
[2025-12-13 20:30:12] 2025-12-14 01:29:42,225 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,225 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,403 | INFO     | [payload] control thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,569 | INFO     | [job] validate thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,593 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,609 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,666 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,807 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:42,955 | INFO     | [data] control thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:43,193 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:43,218 | INFO     | [job] control thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:43,434 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:43,516 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:43,700 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:44,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:30:12] 2025-12-14 01:29:48,486 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:29:51,659 | INFO     | job.realtimelogging is not enabled
[2025-12-13 20:30:12] 2025-12-14 01:29:52,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:30:12] 2025-12-14 01:30:05,252 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:30:12] 2025-12-14 01:30:06,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530561419072)>', '<ExcThread(monitor, started 140529819956992)>']
[2025-12-13 20:30:12] 2025-12-14 01:30:11,946 | INFO     | all workflow threads have been joined
[2025-12-13 20:30:12] 2025-12-14 01:30:11,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:30:12] 2025-12-14 01:30:11,946 | INFO     | traces error code: 0
[2025-12-13 20:30:12] 2025-12-14 01:30:11,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:30:12] 2025-12-14 01:30:12,084 | INFO     | PID=6411 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 20:30:12] 2025-12-14 01:30:12,085 | INFO     | .. there are 3 such processes running
[2025-12-13 20:30:12] 2025-12-14 01:30:12,086 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:30:12] 2025-12-14 01:30:12,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:30:12] 2025-12-14 01:30:12,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:30:12] 2025-12-14 01:30:12,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:30:12] 2025-12-14 01:30:12,086 | INFO     | [monitor] control thread has ended
[2025-12-13 20:30:12] 2025-12-14 01:30:12,202 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:30:12] 2025-12-14 01:30:12,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:30:12] 2025-12-14 01:30:12,207 [wrapper] pilotpid: 6411
[2025-12-13 20:30:12] 2025-12-14 01:30:12,209 [wrapper] Pilot exit status: 0
[2025-12-13 20:30:12] 2025-12-14 01:30:12,220 [wrapper] pandaids: 6929275678
[2025-12-13 20:30:12] 2025-12-14 01:30:12,261 [wrapper] cleanup supervisor_pilot 32441 6412
[2025-12-13 20:30:12] 2025-12-14 01:30:12,263 [wrapper] Test setup, not cleaning
[2025-12-13 20:30:12] 2025-12-14 01:30:12,265 [wrapper] apfmon messages muted
[2025-12-13 20:30:12] 2025-12-14 01:30:12,267 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:30:12] 2025-12-14 01:30:12,269 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:30:12]  *** Error codes and diagnostics ***
[2025-12-13 20:30:12]     "exeErrorCode": 0,
[2025-12-13 20:30:12]     "exeErrorDiag": "",
[2025-12-13 20:30:12]     "pilotErrorCode": 0,
[2025-12-13 20:30:12]     "pilotErrorDiag": "",
[2025-12-13 20:30:12]  *** Listing of results directory ***
[2025-12-13 20:30:12] total 412124
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 20:30:12] -rwx------ 1 boincer umatlas     36322 Dec 13 05:03 runpilot2-wrapper.sh
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:05 queuedata.json
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas       100 Dec 13 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:30:12] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 16:22 run_atlas
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas       105 Dec 13 16:22 job.xml
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas 214571630 Dec 13 16:22 EVNT.47898833._000034.pool.root.1
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:22 start_atlas.sh
[2025-12-13 20:30:12] drwxrwx--x 2 boincer umatlas      4096 Dec 13 16:22 shared
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 16:22 input.tar.gz
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas         0 Dec 13 16:22 boinc_lockfile
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas      2543 Dec 13 16:22 pandaJob.out
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas        57 Dec 13 16:22 setup.sh.local
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas    991736 Dec 13 16:22 agis_schedconf.cvmfs.json
[2025-12-13 20:30:12] drwx------ 5 boincer umatlas      4096 Dec 13 16:22 pilot3
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 20:21 init_data.xml
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas 198474012 Dec 13 20:28 HITS.47898836._000826.pool.root.1
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas      1055 Dec 13 20:29 memory_monitor_summary.json
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas       532 Dec 13 20:29 boinc_task_state.xml
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas   1516240 Dec 13 20:29 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas    458559 Dec 13 20:29 log.47898836._000826.job.log.tgz.1
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas      7854 Dec 13 20:29 heartbeat.json
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 20:29 boinc_mmap_file
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas        29 Dec 13 20:29 wrapper_checkpoint.txt
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas        95 Dec 13 20:30 pilot_heartbeat.json
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas       819 Dec 13 20:30 pilotlog.txt
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas   2067977 Dec 13 20:30 log.47898836._000826.job.log.1
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas       357 Dec 13 20:30 output.list
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas       620 Dec 13 20:30 runtime_log
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas   2549760 Dec 13 20:30 result.tar.gz
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 20:30 runtime_log.err
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas       663 Dec 13 20:30 6NeKDmdebo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyvSKDmkBrzFm.diag
[2025-12-13 20:30:12] -rw-r--r-- 1 boincer umatlas     21051 Dec 13 20:30 stderr.txt
[2025-12-13 20:30:12] HITS file was successfully produced:
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas 198474012 Dec 13 20:28 shared/HITS.pool.root.1
[2025-12-13 20:30:12]  *** Contents of shared directory: ***
[2025-12-13 20:30:12] total 406460
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas 214571630 Dec 13 16:22 ATLAS.root_0
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:22 start_atlas.sh
[2025-12-13 20:30:12] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 16:22 input.tar.gz
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas 198474012 Dec 13 20:28 HITS.pool.root.1
[2025-12-13 20:30:12] -rw------- 1 boincer umatlas   2549760 Dec 13 20:30 result.tar.gz
20:30:13 (2591): run_atlas exited; CPU time 113205.332064
20:30:13 (2591): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN