Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:49:09 (2972280): wrapper (7.7.26015): starting
16:49:09 (2972280): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 16:49:09] Arguments: --nthreads 9
[2025-12-13 16:49:09] Threads: 9
[2025-12-13 16:49:09] Checking for CVMFS
[2025-12-13 16:49:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:49:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:49:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:49:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:49:10] 2.13.3.0 13172 55092 362304 153973 1 343 29645493 32935937 36937 16776704 0 282116840 99.465 369881065 34200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 16:49:10] CVMFS is ok
[2025-12-13 16:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:49:10] Further information can be found at the LHC@home message board.
[2025-12-13 16:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:49:10] Checking for apptainer binary...
[2025-12-13 16:49:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:49:10] Running /usr/bin/apptainer --version
[2025-12-13 16:49:10] apptainer version 1.4.5-2.el9
[2025-12-13 16:49:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:49:11] c6-6-8-3.aglt2.org
[2025-12-13 16:49:11] apptainer works
[2025-12-13 16:49:11] Set ATHENA_PROC_NUMBER=9
[2025-12-13 16:49:11] Set ATHENA_CORE_NUMBER=9
[2025-12-13 16:49:11] Starting ATLAS job with PandaID=6929310143
[2025-12-13 16:49:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:53:55]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:53:55] 2025-12-14 02:53:15,837 | INFO     | chi2: 1.9327894253619136
[2025-12-13 21:53:55] 2025-12-14 02:53:15,837 | INFO     | current chi2=1.9327894253619136 (change=-0.022127543450038853 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,837 | INFO     | right removable region: 290
[2025-12-13 21:53:55] 2025-12-14 02:53:15,838 | INFO     | sum of square deviations: 7640830879.69759
[2025-12-13 21:53:55] 2025-12-14 02:53:15,840 | INFO     | sum of deviations: 11263515077.731945
[2025-12-13 21:53:55] 2025-12-14 02:53:15,860 | INFO     | mean x: 1765671865.4398625
[2025-12-13 21:53:55] 2025-12-14 02:53:15,861 | INFO     | mean y: 2531953.2989690723
[2025-12-13 21:53:55] 2025-12-14 02:53:15,861 | INFO     | intersect: -2600283367.6829944
[2025-12-13 21:53:55] 2025-12-14 02:53:15,861 | INFO     | chi2: 0.050772597957489556
[2025-12-13 21:53:55] 2025-12-14 02:53:15,861 | INFO     | current chi2=0.050772597957489556 (change=97.3725108374569 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,862 | INFO     | sum of square deviations: 7253649696.213302
[2025-12-13 21:53:55] 2025-12-14 02:53:15,864 | INFO     | sum of deviations: 4733680231.248254
[2025-12-13 21:53:55] 2025-12-14 02:53:15,864 | INFO     | mean x: 1765672017.9475524
[2025-12-13 21:53:55] 2025-12-14 02:53:15,887 | INFO     | mean y: 2534499.2832167833
[2025-12-13 21:53:55] 2025-12-14 02:53:15,888 | INFO     | intersect: -1149730508.8532834
[2025-12-13 21:53:55] 2025-12-14 02:53:15,888 | INFO     | chi2: 0.013689460621635542
[2025-12-13 21:53:55] 2025-12-14 02:53:15,888 | INFO     | current chi2=0.013689460621635542 (change=73.03769912838153 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,889 | INFO     | sum of square deviations: 6879823059.395035
[2025-12-13 21:53:55] 2025-12-14 02:53:15,908 | INFO     | sum of deviations: 7421513561.583628
[2025-12-13 21:53:55] 2025-12-14 02:53:15,909 | INFO     | mean x: 1765672170.44484
[2025-12-13 21:53:55] 2025-12-14 02:53:15,909 | INFO     | mean y: 2533402.747330961
[2025-12-13 21:53:55] 2025-12-14 02:53:15,909 | INFO     | intersect: -1902160925.1645634
[2025-12-13 21:53:55] 2025-12-14 02:53:15,909 | INFO     | chi2: 0.009912187226368292
[2025-12-13 21:53:55] 2025-12-14 02:53:15,909 | INFO     | current chi2=0.009912187226368292 (change=27.592565548546517 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,910 | INFO     | sum of square deviations: 6519067287.072493
[2025-12-13 21:53:55] 2025-12-14 02:53:15,912 | INFO     | sum of deviations: 10333389305.69566
[2025-12-13 21:53:55] 2025-12-14 02:53:15,930 | INFO     | mean x: 1765672322.942029
[2025-12-13 21:53:55] 2025-12-14 02:53:15,931 | INFO     | mean y: 2532171.5434782607
[2025-12-13 21:53:55] 2025-12-14 02:53:15,931 | INFO     | intersect: -2796239293.115755
[2025-12-13 21:53:55] 2025-12-14 02:53:15,931 | INFO     | chi2: 0.004926221195551258
[2025-12-13 21:53:55] 2025-12-14 02:53:15,932 | INFO     | current chi2=0.004926221195551258 (change=50.30137059511367 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,932 | INFO     | sum of square deviations: 6171114562.974177
[2025-12-13 21:53:55] 2025-12-14 02:53:15,934 | INFO     | sum of deviations: 11612871604.217716
[2025-12-13 21:53:55] 2025-12-14 02:53:15,957 | INFO     | mean x: 1765672475.4464946
[2025-12-13 21:53:55] 2025-12-14 02:53:15,957 | INFO     | mean y: 2531618.808118081
[2025-12-13 21:53:55] 2025-12-14 02:53:15,957 | INFO     | intersect: -3320130364.407312
[2025-12-13 21:53:55] 2025-12-14 02:53:15,957 | INFO     | chi2: 0.0012531568405550466
[2025-12-13 21:53:55] 2025-12-14 02:53:15,957 | INFO     | current chi2=0.0012531568405550466 (change=74.56149874701647 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,958 | INFO     | sum of square deviations: 5835750439.458646
[2025-12-13 21:53:55] 2025-12-14 02:53:15,960 | INFO     | sum of deviations: 10505217747.894745
[2025-12-13 21:53:55] 2025-12-14 02:53:15,960 | INFO     | mean x: 1765672627.9548872
[2025-12-13 21:53:55] 2025-12-14 02:53:15,975 | INFO     | mean y: 2532122.6578947366
[2025-12-13 21:53:55] 2025-12-14 02:53:15,976 | INFO     | intersect: -3175940915.316004
[2025-12-13 21:53:55] 2025-12-14 02:53:15,976 | INFO     | chi2: 0.001137315452862752
[2025-12-13 21:53:55] 2025-12-14 02:53:15,976 | INFO     | current chi2=0.001137315452862752 (change=9.243965634899011 %)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,977 | INFO     | left removable region: 60
[2025-12-13 21:53:55] 2025-12-14 02:53:15,977 | INFO     | sum of square deviations: 3772396758.9608893
[2025-12-13 21:53:55] 2025-12-14 02:53:15,979 | INFO     | sum of deviations: 4913207736.71739
[2025-12-13 21:53:55] 2025-12-14 02:53:15,979 | INFO     | mean x: 1765673359.9869566
[2025-12-13 21:53:55] 2025-12-14 02:53:15,979 | INFO     | mean y: 2534205.2391304346
[2025-12-13 21:53:55] 2025-12-14 02:53:15,979 | INFO     | intersect: -2297096657.3409963
[2025-12-13 21:53:55] 2025-12-14 02:53:15,998 | INFO     | chi2: 0.00029265395689218694
[2025-12-13 21:53:55] 2025-12-14 02:53:15,998 | INFO     | current memory leak: 1.30 B/s (using 230 data points, chi2=0.00)
[2025-12-13 21:53:55] 2025-12-14 02:53:15,999 | INFO     | could have reported an average CPU frequency of 2704 MHz (13 samples)
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | ..............................
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | . Timing measurements:
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | . get job = 0 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | . initial setup = 4 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | . payload setup = 30 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,000 | INFO     | . stage-in = 0 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,001 | INFO     | . payload execution = 18059 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,001 | INFO     | . stage-out = 5 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,001 | INFO     | . log creation = 0 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,001 | INFO     | ..............................
[2025-12-13 21:53:55] 2025-12-14 02:53:16,159 | INFO     | 
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | job summary report
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | --------------------------------------------------
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | PanDA job id: 6929310143
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | task id: 47886831
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | errors: (none)
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | pilot state: finished 
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | transexitcode: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | exeerrorcode: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | exeerrordiag: 
[2025-12-13 21:53:55] 2025-12-14 02:53:16,160 | INFO     | exitcode: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | exitmsg: OK
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | cpuconsumptiontime: 48531 s
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | nevents: 400
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | neventsw: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | pid: 2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | pgrp: 2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | corecount: 9
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | event service: False
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | sizes: {0: 2283162, 1: 2283847, 2: 2284046, 13: 2284046, 24: 2284364, 35: 2284392, 18095: 2316643, 18096: 2316642, 18103: 2325696, 18106: 2325752, 18135: 2325946}
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | --------------------------------------------------
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | 
[2025-12-13 21:53:55] 2025-12-14 02:53:16,161 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 21:53:55] 2025-12-14 02:53:16,331 | INFO     | time since job start (18192s) is within the limit (174528.0s)
[2025-12-13 21:53:55] 2025-12-14 02:53:16,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | job 6929310143 has completed (purged errors)
[2025-12-13 21:53:55] 2025-12-14 02:53:16,344 | INFO     | overall cleanup function is called
[2025-12-13 21:53:55] 2025-12-14 02:53:17,386 | INFO     | --- collectZombieJob: --- 10, [2997492]
[2025-12-13 21:53:55] 2025-12-14 02:53:17,386 | INFO     | zombie collector waiting for pid 2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:17,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:53:55] 2025-12-14 02:53:17,387 | INFO     | collected zombie processes
[2025-12-13 21:53:55] 2025-12-14 02:53:17,387 | INFO     | will attempt to kill all subprocesses of pid=2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:19,728 | INFO     | process IDs to be killed: [2997492] (in reverse order)
[2025-12-13 21:53:55] 2025-12-14 02:53:20,054 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:53:55] 2025-12-14 02:53:20,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:53:55] 2025-12-14 02:53:20,096 | INFO     | did not find any defunct processes belonging to 2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:20,136 | INFO     | did not find any defunct processes belonging to 2997492
[2025-12-13 21:53:55] 2025-12-14 02:53:20,137 | INFO     | ready for new job
[2025-12-13 21:53:55] 2025-12-14 02:53:20,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:53:55] 2025-12-14 02:53:20,143 | INFO     | ***************************************
[2025-12-13 21:53:55] 2025-12-14 02:53:20,143 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:53:55] 2025-12-14 02:53:20,144 | INFO     | ***************************************
[2025-12-13 21:53:55] 2025-12-14 02:53:20,144 | INFO     | 
[2025-12-13 21:53:55] 2025-12-14 02:53:20,154 | INFO     | architecture information:
[2025-12-13 21:53:55] 2025-12-14 02:53:20,157 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:53:55] 2025-12-14 02:53:20,212 | INFO     | cat /etc/os-release:
[2025-12-13 21:53:55] NAME="CentOS Linux"
[2025-12-13 21:53:55] VERSION="7 (Core)"
[2025-12-13 21:53:55] ID="centos"
[2025-12-13 21:53:55] ID_LIKE="rhel fedora"
[2025-12-13 21:53:55] VERSION_ID="7"
[2025-12-13 21:53:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:53:55] ANSI_COLOR="0;31"
[2025-12-13 21:53:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:53:55] HOME_URL="https://www.centos.org/"
[2025-12-13 21:53:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:53:55] 
[2025-12-13 21:53:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:53:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:53:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:53:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:53:55] 
[2025-12-13 21:53:55] 2025-12-14 02:53:20,212 | INFO     | ***************************************
[2025-12-13 21:53:55] 2025-12-14 02:53:20,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 21:53:55] 2025-12-14 02:53:20,857 | INFO     | sufficient remaining disk space (94723112960 B)
[2025-12-13 21:53:55] 2025-12-14 02:53:20,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:53:55] 2025-12-14 02:53:20,858 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:53:55] 2025-12-14 02:53:20,858 | INFO     | update_server=False
[2025-12-13 21:53:55] 2025-12-14 02:53:20,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:53:55] 2025-12-14 02:53:20,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:53:55] 2025-12-14 02:53:21,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:53:55] 2025-12-14 02:53:21,429 | INFO     | all job control threads have been joined
[2025-12-13 21:53:55] 2025-12-14 02:53:21,695 | INFO     | all data control threads have been joined
[2025-12-13 21:53:55] 2025-12-14 02:53:21,747 | INFO     | all payload control threads have been joined
[2025-12-13 21:53:55] 2025-12-14 02:53:21,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:53:55] 2025-12-14 02:53:21,772 | INFO     | aborting loop
[2025-12-13 21:53:55] 2025-12-14 02:53:21,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:53:55] 2025-12-14 02:53:21,865 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,147 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,183 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,438 | INFO     | [job] control thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,565 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,776 | INFO     | [data] control thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,778 | INFO     | [payload] control thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,797 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,910 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:22,911 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:23,081 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:23,199 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:23,353 | INFO     | [job] validate thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:23,845 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:24,896 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:53:55] 2025-12-14 02:53:35,531 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:53:55] 2025-12-14 02:53:36,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919108093760)>', '<ExcThread(monitor, started 139918609209088)>']
[2025-12-13 21:53:55] 2025-12-14 02:53:41,443 | INFO     | all workflow threads have been joined
[2025-12-13 21:53:55] 2025-12-14 02:53:41,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:53:55] 2025-12-14 02:53:41,444 | INFO     | traces error code: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:41,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:53:55] 2025-12-14 02:53:52,126 | INFO     | PID=2981146 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 21:53:55] 2025-12-14 02:53:52,127 | INFO     | .. there are 43 such processes running
[2025-12-13 21:53:55] 2025-12-14 02:53:52,128 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:53:55] 2025-12-14 02:53:52,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:53:55] 2025-12-14 02:53:52,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:53:55] 2025-12-14 02:53:52,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:53:55] 2025-12-14 02:53:52,128 | INFO     | [monitor] control thread has ended
[2025-12-13 21:53:55] 2025-12-14 02:53:53,472 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:53:55] 2025-12-14 02:53:53,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:53:55] 2025-12-14 02:53:53,496 [wrapper] pilotpid: 2981146
[2025-12-13 21:53:55] 2025-12-14 02:53:53,520 [wrapper] Pilot exit status: 0
[2025-12-13 21:53:55] 2025-12-14 02:53:53,628 [wrapper] pandaids: 6929310143
[2025-12-13 21:53:55] 2025-12-14 02:53:54,682 [wrapper] cleanup supervisor_pilot   46718 2981147
[2025-12-13 21:53:55] 2025-12-14 02:53:54,704 [wrapper] Test setup, not cleaning
[2025-12-13 21:53:55] 2025-12-14 02:53:54,726 [wrapper] apfmon messages muted
[2025-12-13 21:53:55] 2025-12-14 02:53:54,831 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:53:55] 2025-12-14 02:53:54,848 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:54:15]  *** Error codes and diagnostics ***
[2025-12-13 21:54:15]     "exeErrorCode": 0,
[2025-12-13 21:54:15]     "exeErrorDiag": "",
[2025-12-13 21:54:15]     "pilotErrorCode": 0,
[2025-12-13 21:54:15]     "pilotErrorDiag": "",
[2025-12-13 21:54:15]  *** Listing of results directory ***
[2025-12-13 21:54:15] total 338064
[2025-12-13 21:54:15] -rwx------. 1 boincer umatlas     36322 Dec 13 08:48 runpilot2-wrapper.sh
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:52 queuedata.json
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas       100 Dec 13 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:54:15] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 16:49 run_atlas
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas       105 Dec 13 16:49 job.xml
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas 188851883 Dec 13 16:49 EVNT.47886829._000197.pool.root.1
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 16:49 start_atlas.sh
[2025-12-13 21:54:15] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 16:49 shared
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas    592413 Dec 13 16:49 input.tar.gz
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas         0 Dec 13 16:49 boinc_lockfile
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas      2538 Dec 13 16:49 pandaJob.out
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas        57 Dec 13 16:49 setup.sh.local
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas    991736 Dec 13 16:50 agis_schedconf.cvmfs.json
[2025-12-13 21:54:15] drwx------. 5 boincer umatlas      4096 Dec 13 16:50 pilot3
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas      6879 Dec 13 21:46 init_data.xml
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas 147930922 Dec 13 21:51 HITS.47886831._004916.pool.root.1
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas       531 Dec 13 21:51 boinc_task_state.xml
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas      1042 Dec 13 21:52 memory_monitor_summary.json
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas   1516240 Dec 13 21:52 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas    505057 Dec 13 21:52 log.47886831._004916.job.log.tgz.1
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas      7817 Dec 13 21:53 heartbeat.json
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas       823 Dec 13 21:53 pilotlog.txt
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas        95 Dec 13 21:53 pilot_heartbeat.json
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas   2233941 Dec 13 21:53 log.47886831._004916.job.log.1
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas       357 Dec 13 21:53 output.list
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas       620 Dec 13 21:53 runtime_log
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas   2754560 Dec 13 21:53 result.tar.gz
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 21:53 runtime_log.err
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas       655 Dec 13 21:53 ggPNDmk9eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMgPKDmwpHzkn.diag
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas        28 Dec 13 21:53 wrapper_checkpoint.txt
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 21:54 boinc_mmap_file
[2025-12-13 21:54:15] -rw-r--r--. 1 boincer umatlas     21140 Dec 13 21:54 stderr.txt
[2025-12-13 21:54:15] HITS file was successfully produced:
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas 147930922 Dec 13 21:51 shared/HITS.pool.root.1
[2025-12-13 21:54:15]  *** Contents of shared directory: ***
[2025-12-13 21:54:15] total 332188
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas 188851883 Dec 13 16:49 ATLAS.root_0
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 16:49 start_atlas.sh
[2025-12-13 21:54:15] -rw-r--r--. 2 boincer umatlas    592413 Dec 13 16:49 input.tar.gz
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas 147930922 Dec 13 21:51 HITS.pool.root.1
[2025-12-13 21:54:15] -rw-------. 1 boincer umatlas   2754560 Dec 13 21:53 result.tar.gz
21:54:16 (2972280): run_atlas exited; CPU time 49521.133287
21:54:16 (2972280): called boinc_finish(0)

</stderr_txt>
]]>

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