Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:10:48 (30655): wrapper (7.7.26015): starting
16:10:48 (30655): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 16:10:48] Arguments: --nthreads 12
[2025-12-13 16:10:48] Threads: 12
[2025-12-13 16:10:48] Checking for CVMFS
[2025-12-13 16:10:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:10:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:10:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:10:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:10:48] 2.11.2.0 2925 312684 95912 153972 1 57 15977138 20275201 1 130560 1 138245621 99.966 18171951 15169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 16:10:48] CVMFS is ok
[2025-12-13 16:10:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:10:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:10:48] Further information can be found at the LHC@home message board.
[2025-12-13 16:10:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:10:48] Checking for apptainer binary...
[2025-12-13 16:10:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:10:48] Running /usr/bin/apptainer --version
[2025-12-13 16:10:48] apptainer version 1.3.2-1.el7
[2025-12-13 16:10:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:10:50] c-205-9.aglt2.org
[2025-12-13 16:10:50] apptainer works
[2025-12-13 16:10:50] Set ATHENA_PROC_NUMBER=12
[2025-12-13 16:10:50] Set ATHENA_CORE_NUMBER=12
[2025-12-13 16:10:50] Starting ATLAS job with PandaID=6929310321
[2025-12-13 16:10:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:33:20]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:33:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 17:33:20]  replicas=None
[2025-12-13 17:33:20]  scope=mc23_13p6TeV
[2025-12-13 17:33:20]  status=None
[2025-12-13 17:33:20]  status_code=0
[2025-12-13 17:33:20]  storage_token=
[2025-12-13 17:33:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929310321/log.47886831._005062.job.log.tgz.1
[2025-12-13 17:33:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/2f/log.47886831._005062.job.log.tgz.1
[2025-12-13 17:33:20]  workdir=None
[2025-12-13 17:33:20] ]
[2025-12-13 17:33:20] 2025-12-13 22:32:18,325 | INFO     | transferring file log.47886831._005062.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929310321/log.47886831._005062.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 17:33:20] 2025-12-13 22:32:18,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929310321/log.47886831._005062.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._005062.job
[2025-12-13 17:33:20] 2025-12-13 22:32:18,348 | INFO     | adding to output.list: log.47886831._005062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/2f/log.47886831._005062.job.log.tg
[2025-12-13 17:33:20] 2025-12-13 22:32:18,349 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 17:33:20] 2025-12-13 22:32:18,350 | INFO     | summary of transferred files:
[2025-12-13 17:33:20] 2025-12-13 22:32:18,350 | INFO     |  -- lfn=log.47886831._005062.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 17:33:20] 2025-12-13 22:32:18,350 | INFO     | stage-out finished correctly
[2025-12-13 17:33:20] 2025-12-13 22:32:18,777 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 17:33:20] 2025-12-13 22:32:19,461 | INFO     | time since job start (4874s) is within the limit (174528.0s)
[2025-12-13 17:33:20] 2025-12-13 22:32:20,289 | INFO     | monitor loop #363: job 0:6929310321 is in state 'finished'
[2025-12-13 17:33:20] 2025-12-13 22:32:20,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,443 | INFO     | job 6929310321 has state=finished
[2025-12-13 17:33:20] 2025-12-13 22:32:21,443 | INFO     | preparing for final server update for job 6929310321 in state='finished'
[2025-12-13 17:33:20] 2025-12-13 22:32:21,466 | INFO     | time since job start (4876s) is within the limit (174528.0s)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,503 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,503 | INFO     | this job has now completed (state=finished)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,503 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,503 | INFO     | log transfer has been attempted: DONE
[2025-12-13 17:33:20] 2025-12-13 22:32:21,504 | INFO     | job 6929310321 has finished - writing final server update
[2025-12-13 17:33:20] 2025-12-13 22:32:21,504 | INFO     | total number of processed events: 400 (read)
[2025-12-13 17:33:20] 2025-12-13 22:32:21,505 | INFO     | executing command: lscpu
[2025-12-13 17:33:20] 2025-12-13 22:32:21,533 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 17:33:20] 2025-12-13 22:32:22,792 | INFO     | monitor loop #364: job 0:6929310321 is in state 'finished'
[2025-12-13 17:33:20] 2025-12-13 22:32:22,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:33:20] 2025-12-13 22:32:23,471 | INFO     | time since job start (4878s) is within the limit (174528.0s)
[2025-12-13 17:33:20] 2025-12-13 22:32:25,295 | INFO     | monitor loop #365: job 0:6929310321 is in state 'finished'
[2025-12-13 17:33:20] 2025-12-13 22:32:25,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:33:20] 2025-12-13 22:32:25,476 | INFO     | time since job start (4880s) is within the limit (174528.0s)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,481 | INFO     | time since job start (4882s) is within the limit (174528.0s)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,631 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 17:33:20] 2025-12-13 22:32:27,635 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-13 17:33:20] 2025-12-13 22:32:27,647 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310321/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,648 | INFO     | extracted standard info from prmon json
[2025-12-13 17:33:20] 2025-12-13 22:32:27,648 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 17:33:20] 2025-12-13 22:32:27,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:33:20] 2025-12-13 22:32:27,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:33:20] 2025-12-13 22:32:27,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:33:20] 2025-12-13 22:32:27,650 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:33:20] 2025-12-13 22:32:27,650 | INFO     | sum of square deviations: 120605052.0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,650 | INFO     | sum of deviations: 1350366882.0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,650 | INFO     | mean x: 1765662796.0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,651 | INFO     | mean y: 2649814.506849315
[2025-12-13 17:33:20] 2025-12-13 22:32:27,651 | INFO     | intersect: -19766775470.413403
[2025-12-13 17:33:20] 2025-12-13 22:32:27,651 | INFO     | chi2: 0.0020848444004649353
[2025-12-13 17:33:20] 2025-12-13 22:32:27,651 | INFO     | current memory leak: 11.20 B/s (using 73 data points, chi2=0.00)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,651 | INFO     | could have reported an average CPU frequency of 2026 MHz (6 samples)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | ..............................
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . Timing measurements:
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . get job = 0 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . initial setup = 2 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . payload setup = 7 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . stage-in = 0 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . payload execution = 4843 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . stage-out = 0 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | . log creation = 0 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,652 | INFO     | ..............................
[2025-12-13 17:33:20] 2025-12-13 22:32:27,733 | INFO     | 
[2025-12-13 17:33:20] 2025-12-13 22:32:27,733 | INFO     | job summary report
[2025-12-13 17:33:20] 2025-12-13 22:32:27,733 | INFO     | --------------------------------------------------
[2025-12-13 17:33:20] 2025-12-13 22:32:27,733 | INFO     | PanDA job id: 6929310321
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | task id: 47886831
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | errors: (none)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | pilot state: finished 
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | transexitcode: 0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,734 | INFO     | exeerrorcode: 0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | exeerrordiag: 
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | exitcode: 0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | exitmsg: OK
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | cpuconsumptiontime: 52264 s
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | nevents: 400
[2025-12-13 17:33:20] 2025-12-13 22:32:27,735 | INFO     | neventsw: 0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | pid: 8461
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | pgrp: 8461
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | corecount: 12
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | event service: False
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | sizes: {0: 2283990, 5: 2284252, 11: 2284308, 4854: 2310513, 4857: 2319567, 4866: 2319705}
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | --------------------------------------------------
[2025-12-13 17:33:20] 2025-12-13 22:32:27,736 | INFO     | 
[2025-12-13 17:33:20] 2025-12-13 22:32:27,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:33:20] 2025-12-13 22:32:27,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:33:20] 2025-12-13 22:32:27,766 | INFO     | job 6929310321 has completed (purged errors)
[2025-12-13 17:33:20] 2025-12-13 22:32:27,766 | INFO     | overall cleanup function is called
[2025-12-13 17:33:20] 2025-12-13 22:32:28,774 | INFO     | --- collectZombieJob: --- 10, [8461]
[2025-12-13 17:33:20] 2025-12-13 22:32:28,774 | INFO     | zombie collector waiting for pid 8461
[2025-12-13 17:33:20] 2025-12-13 22:32:28,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:33:20] 2025-12-13 22:32:28,775 | INFO     | collected zombie processes
[2025-12-13 17:33:20] 2025-12-13 22:32:28,775 | INFO     | will attempt to kill all subprocesses of pid=8461
[2025-12-13 17:33:20] 2025-12-13 22:32:28,863 | INFO     | process IDs to be killed: [8461] (in reverse order)
[2025-12-13 17:33:20] 2025-12-13 22:32:28,915 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:33:20] 2025-12-13 22:32:28,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:33:20] 2025-12-13 22:32:28,919 | INFO     | did not find any defunct processes belonging to 8461
[2025-12-13 17:33:20] 2025-12-13 22:32:28,921 | INFO     | did not find any defunct processes belonging to 8461
[2025-12-13 17:33:20] 2025-12-13 22:32:28,922 | INFO     | ready for new job
[2025-12-13 17:33:20] 2025-12-13 22:32:28,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:33:20] 2025-12-13 22:32:28,923 | INFO     | ***************************************
[2025-12-13 17:33:20] 2025-12-13 22:32:28,923 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:33:20] 2025-12-13 22:32:28,923 | INFO     | ***************************************
[2025-12-13 17:33:20] 2025-12-13 22:32:28,923 | INFO     | 
[2025-12-13 17:33:20] 2025-12-13 22:32:28,924 | INFO     | architecture information:
[2025-12-13 17:33:20] 2025-12-13 22:32:28,924 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:33:20] 2025-12-13 22:32:28,938 | INFO     | cat /etc/os-release:
[2025-12-13 17:33:20] NAME="CentOS Linux"
[2025-12-13 17:33:20] VERSION="7 (Core)"
[2025-12-13 17:33:20] ID="centos"
[2025-12-13 17:33:20] ID_LIKE="rhel fedora"
[2025-12-13 17:33:20] VERSION_ID="7"
[2025-12-13 17:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:33:20] ANSI_COLOR="0;31"
[2025-12-13 17:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:33:20] HOME_URL="https://www.centos.org/"
[2025-12-13 17:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:33:20] 
[2025-12-13 17:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:33:20] 
[2025-12-13 17:33:20] 2025-12-13 22:32:28,939 | INFO     | ***************************************
[2025-12-13 17:33:20] 2025-12-13 22:32:29,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:33:20] 2025-12-13 22:32:29,459 | INFO     | sufficient remaining disk space (29444014080 B)
[2025-12-13 17:33:20] 2025-12-13 22:32:29,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:33:20] 2025-12-13 22:32:29,460 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:33:20] 2025-12-13 22:32:29,460 | INFO     | update_server=False
[2025-12-13 17:33:20] 2025-12-13 22:32:29,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:33:20] 2025-12-13 22:32:29,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:33:20] 2025-12-13 22:32:29,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:33:20] 2025-12-13 22:32:29,462 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-13 17:33:20] 2025-12-13 22:32:29,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:33:20] 2025-12-13 22:32:29,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:33:20] 2025-12-13 22:32:29,462 | INFO     | aborting loop
[2025-12-13 17:33:20] 2025-12-13 22:32:29,463 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:33:20] 2025-12-13 22:32:29,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:33:20] 2025-12-13 22:32:29,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:33:20] 2025-12-13 22:32:29,632 | INFO     | all job control threads have been joined
[2025-12-13 17:33:20] 2025-12-13 22:32:29,724 | INFO     | all data control threads have been joined
[2025-12-13 17:33:20] 2025-12-13 22:32:30,466 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,468 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,469 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,545 | INFO     | all payload control threads have been joined
[2025-12-13 17:33:20] 2025-12-13 22:32:30,568 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,638 | INFO     | [job] control thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,729 | INFO     | [data] control thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:30,964 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,311 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,327 | INFO     | [job] validate thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,468 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,512 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,549 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,551 | INFO     | [payload] control thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:31,777 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:32:33,467 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:33:20] 2025-12-13 22:33:13,245 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:33:20] 2025-12-13 22:33:15,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771308894016)>', '<ExcThread(monitor, started 139770575447808)>']
[2025-12-13 17:33:20] 2025-12-13 22:33:15,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:33:20] 2025-12-13 22:33:15,658 | INFO     | [monitor] control thread has ended
[2025-12-13 17:33:20] 2025-12-13 22:33:20,040 | INFO     | all workflow threads have been joined
[2025-12-13 17:33:20] 2025-12-13 22:33:20,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:33:20] 2025-12-13 22:33:20,040 | INFO     | traces error code: 0
[2025-12-13 17:33:20] 2025-12-13 22:33:20,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:33:20] 2025-12-13 22:33:20,126 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:33:20] 2025-12-13 22:33:20,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:33:20] 2025-12-13 22:33:20,134 [wrapper] pilotpid: 2022
[2025-12-13 17:33:20] 2025-12-13 22:33:20,139 [wrapper] Pilot exit status: 0
[2025-12-13 17:33:20] 2025-12-13 22:33:20,155 [wrapper] pandaids: 6929310321
[2025-12-13 17:33:20] 2025-12-13 22:33:20,205 [wrapper] cleanup supervisor_pilot  4688 2023
[2025-12-13 17:33:20] 2025-12-13 22:33:20,210 [wrapper] Test setup, not cleaning
[2025-12-13 17:33:20] 2025-12-13 22:33:20,214 [wrapper] apfmon messages muted
[2025-12-13 17:33:20] 2025-12-13 22:33:20,218 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:33:20] 2025-12-13 22:33:20,222 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:33:20]  *** Error codes and diagnostics ***
[2025-12-13 17:33:20]     "exeErrorCode": 0,
[2025-12-13 17:33:20]     "exeErrorDiag": "",
[2025-12-13 17:33:20]     "pilotErrorCode": 0,
[2025-12-13 17:33:20]     "pilotErrorDiag": "",
[2025-12-13 17:33:20]  *** Listing of results directory ***
[2025-12-13 17:33:20] total 345728
[2025-12-13 17:33:20] -rwx------ 1 boincer umatlas     36322 Dec 13 08:48 runpilot2-wrapper.sh
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:52 queuedata.json
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas       100 Dec 13 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:33:20] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 16:10 run_atlas
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas       105 Dec 13 16:10 job.xml
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas 194444544 Dec 13 16:10 EVNT.47886829._000203.pool.root.1
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:10 start_atlas.sh
[2025-12-13 17:33:20] drwxrwx--x 2 boincer umatlas      4096 Dec 13 16:10 shared
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas    592404 Dec 13 16:10 input.tar.gz
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas         0 Dec 13 16:10 boinc_lockfile
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 16:10 pandaJob.out
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas        57 Dec 13 16:10 setup.sh.local
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas    991736 Dec 13 16:11 agis_schedconf.cvmfs.json
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas   1516240 Dec 13 16:11 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:33:20] drwx------ 5 boincer umatlas      4096 Dec 13 16:11 pilot3
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 17:27 init_data.xml
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas 153503779 Dec 13 17:31 HITS.47886831._005062.pool.root.1
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas       529 Dec 13 17:31 boinc_task_state.xml
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas        95 Dec 13 17:32 pilot_heartbeat.json
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas      1058 Dec 13 17:32 memory_monitor_summary.json
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas    376496 Dec 13 17:32 log.47886831._005062.job.log.tgz.1
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas      7843 Dec 13 17:32 heartbeat.json
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:33 boinc_mmap_file
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas        27 Dec 13 17:33 wrapper_checkpoint.txt
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas      4552 Dec 13 17:33 pilotlog.txt
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas    702333 Dec 13 17:33 log.47886831._005062.job.log.1
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas       357 Dec 13 17:33 output.list
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:33 runtime_log
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas   1095680 Dec 13 17:33 result.tar.gz
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 17:33 runtime_log.err
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas       658 Dec 13 17:33 FBKKDml9eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAhPKDmLbOl8m.diag
[2025-12-13 17:33:20] -rw-r--r-- 1 boincer umatlas     21828 Dec 13 17:33 stderr.txt
[2025-12-13 17:33:20] HITS file was successfully produced:
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas 153503779 Dec 13 17:31 shared/HITS.pool.root.1
[2025-12-13 17:33:20]  *** Contents of shared directory: ***
[2025-12-13 17:33:20] total 341472
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas 194444544 Dec 13 16:10 ATLAS.root_0
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:10 start_atlas.sh
[2025-12-13 17:33:20] -rw-r--r-- 2 boincer umatlas    592404 Dec 13 16:10 input.tar.gz
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas 153503779 Dec 13 17:31 HITS.pool.root.1
[2025-12-13 17:33:20] -rw------- 1 boincer umatlas   1095680 Dec 13 17:33 result.tar.gz
17:33:22 (30655): run_atlas exited; CPU time 52252.804230
17:33:22 (30655): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN