Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:57 (5676): wrapper (7.7.26015): starting
16:00:57 (5676): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 16:00:57] Arguments: --nthreads 8
[2025-12-13 16:00:57] Threads: 8
[2025-12-13 16:00:57] Checking for CVMFS
[2025-12-13 16:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:00:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:00:58] 2.11.2.0 3643 90876 130896 153972 1 57 17138969 18432001 1833 130560 0 55936537 99.980 3467231 29302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 16:00:58] CVMFS is ok
[2025-12-13 16:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:00:58] Further information can be found at the LHC@home message board.
[2025-12-13 16:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:00:58] Checking for apptainer binary...
[2025-12-13 16:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:00:58] Running /usr/bin/apptainer --version
[2025-12-13 16:00:58] apptainer version 1.3.2-1.el7
[2025-12-13 16:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:00:58] c-206-15.aglt2.org
[2025-12-13 16:00:58] apptainer works
[2025-12-13 16:00:58] Set ATHENA_PROC_NUMBER=8
[2025-12-13 16:00:58] Set ATHENA_CORE_NUMBER=8
[2025-12-13 16:00:58] Starting ATLAS job with PandaID=6929400754
[2025-12-13 16:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:57:33]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:57:33] 2025-12-13 23:56:59,061 | INFO     | extracted standard info from prmon json
[2025-12-13 18:57:33] 2025-12-13 23:56:59,061 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:57:33] 2025-12-13 23:56:59,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:57:33] 2025-12-13 23:56:59,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:57:33] 2025-12-13 23:56:59,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:57:33] 2025-12-13 23:56:59,067 | INFO     | fitting pss+swap vs Time
[2025-12-13 18:57:33] 2025-12-13 23:56:59,068 | INFO     | sum of square deviations: 1605470102.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,069 | INFO     | sum of deviations: 15367743724.999996
[2025-12-13 18:57:33] 2025-12-13 23:56:59,069 | INFO     | mean x: 1765664941.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,069 | INFO     | mean y: 2448280.612716763
[2025-12-13 18:57:33] 2025-12-13 23:56:59,070 | INFO     | intersect: -16898698793.819218
[2025-12-13 18:57:33] 2025-12-13 23:56:59,070 | INFO     | chi2: 2.3442522142914015
[2025-12-13 18:57:33] 2025-12-13 23:56:59,071 | INFO     | sum of square deviations: 1470248962.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,072 | INFO     | sum of deviations: 26493589021.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,072 | INFO     | mean x: 1765664788.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,072 | INFO     | mean y: 2460512.113095238
[2025-12-13 18:57:33] 2025-12-13 23:56:59,072 | INFO     | intersect: -31814461971.966656
[2025-12-13 18:57:33] 2025-12-13 23:56:59,073 | INFO     | chi2: 1.4938252357514024
[2025-12-13 18:57:33] 2025-12-13 23:56:59,073 | INFO     | current chi2=1.4938252357514024 (change=36.277111027366914 %)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,073 | INFO     | sum of square deviations: 1342841922.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,075 | INFO     | sum of deviations: 25447901797.999996
[2025-12-13 18:57:33] 2025-12-13 23:56:59,075 | INFO     | mean x: 1765664636.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,075 | INFO     | mean y: 2459260.2208588957
[2025-12-13 18:57:33] 2025-12-13 23:56:59,075 | INFO     | intersect: -33458262757.012535
[2025-12-13 18:57:33] 2025-12-13 23:56:59,076 | INFO     | chi2: 1.4951448365788873
[2025-12-13 18:57:33] 2025-12-13 23:56:59,076 | INFO     | current chi2=1.4951448365788873 (change=-0.08833702871682839 %)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,076 | INFO     | right removable region: 162
[2025-12-13 18:57:33] 2025-12-13 23:56:59,077 | INFO     | sum of square deviations: 1470248962.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,078 | INFO     | sum of deviations: -10761993564.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,078 | INFO     | mean x: 1765665093.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,078 | INFO     | mean y: 2477380.261904762
[2025-12-13 18:57:33] 2025-12-13 23:56:59,079 | INFO     | intersect: 12926871046.609182
[2025-12-13 18:57:33] 2025-12-13 23:56:59,079 | INFO     | chi2: 0.9251612560555307
[2025-12-13 18:57:33] 2025-12-13 23:56:59,079 | INFO     | current chi2=0.9251612560555307 (change=60.5349095794635 %)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,080 | INFO     | sum of square deviations: 1342841922.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,081 | INFO     | sum of deviations: -9698241099.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,081 | INFO     | mean x: 1765665246.0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,081 | INFO     | mean y: 2476043.7484662575
[2025-12-13 18:57:33] 2025-12-13 23:56:59,081 | INFO     | intersect: 12754421730.943914
[2025-12-13 18:57:33] 2025-12-13 23:56:59,082 | INFO     | chi2: 0.9096200289432598
[2025-12-13 18:57:33] 2025-12-13 23:56:59,082 | INFO     | current chi2=0.9096200289432598 (change=1.6798398128485916 %)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,082 | INFO     | left removable region: 20
[2025-12-13 18:57:33] 2025-12-13 23:56:59,083 | INFO     | sum of square deviations: 887813855.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,084 | INFO     | sum of deviations: 3254158978.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,084 | INFO     | mean x: 1765665215.5
[2025-12-13 18:57:33] 2025-12-13 23:56:59,084 | INFO     | mean y: 2486584.415492958
[2025-12-13 18:57:33] 2025-12-13 23:56:59,084 | INFO     | intersect: -6469315222.291569
[2025-12-13 18:57:33] 2025-12-13 23:56:59,085 | INFO     | chi2: 0.0001847752828603523
[2025-12-13 18:57:33] 2025-12-13 23:56:59,085 | INFO     | current memory leak: 3.67 B/s (using 142 data points, chi2=0.00)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,085 | INFO     | could have reported an average CPU frequency of 2542 MHz (9 samples)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | ..............................
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | . Timing measurements:
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | . get job = 0 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | . initial setup = 2 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | . payload setup = 5 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,086 | INFO     | . stage-in = 0 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,087 | INFO     | . payload execution = 10519 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,087 | INFO     | . stage-out = 0 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,087 | INFO     | . log creation = 0 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,087 | INFO     | ..............................
[2025-12-13 18:57:33] 2025-12-13 23:56:59,336 | INFO     | 
[2025-12-13 18:57:33] 2025-12-13 23:56:59,336 | INFO     | job summary report
[2025-12-13 18:57:33] 2025-12-13 23:56:59,347 | INFO     | --------------------------------------------------
[2025-12-13 18:57:33] 2025-12-13 23:56:59,347 | INFO     | PanDA job id: 6929400754
[2025-12-13 18:57:33] 2025-12-13 23:56:59,347 | INFO     | task id: 47899042
[2025-12-13 18:57:33] 2025-12-13 23:56:59,347 | INFO     | errors: (none)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | pilot state: finished 
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | transexitcode: 0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | exeerrorcode: 0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | exeerrordiag: 
[2025-12-13 18:57:33] 2025-12-13 23:56:59,348 | INFO     | exitcode: 0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,349 | INFO     | exitmsg: OK
[2025-12-13 18:57:33] 2025-12-13 23:56:59,349 | INFO     | cpuconsumptiontime: 79508 s
[2025-12-13 18:57:33] 2025-12-13 23:56:59,349 | INFO     | nevents: 400
[2025-12-13 18:57:33] 2025-12-13 23:56:59,349 | INFO     | neventsw: 0
[2025-12-13 18:57:33] 2025-12-13 23:56:59,349 | INFO     | pid: 15879
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | pgrp: 15879
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | corecount: 8
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | event service: False
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | sizes: {0: 2283705, 1: 2283960, 2: 2283960, 4: 2284250, 12: 2284278, 10527: 2313075, 10529: 2322073, 10530: 2322129, 10533: 2322387}
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | --------------------------------------------------
[2025-12-13 18:57:33] 2025-12-13 23:56:59,350 | INFO     | 
[2025-12-13 18:57:33] 2025-12-13 23:56:59,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 18:57:33] 2025-12-13 23:56:59,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,369 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:57:33] 2025-12-13 23:56:59,373 | INFO     | job 6929400754 has completed (purged errors)
[2025-12-13 18:57:33] 2025-12-13 23:56:59,373 | INFO     | overall cleanup function is called
[2025-12-13 18:57:33] 2025-12-13 23:57:00,112 | WARNING  | process 15879 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 18:57:33] 2025-12-13 23:57:00,243 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:57:33] 2025-12-13 23:57:00,381 | INFO     | --- collectZombieJob: --- 10, [15879]
[2025-12-13 18:57:33] 2025-12-13 23:57:00,381 | INFO     | zombie collector waiting for pid 15879
[2025-12-13 18:57:33] 2025-12-13 23:57:00,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:57:33] 2025-12-13 23:57:00,382 | INFO     | collected zombie processes
[2025-12-13 18:57:33] 2025-12-13 23:57:00,382 | INFO     | will attempt to kill all subprocesses of pid=15879
[2025-12-13 18:57:33] 2025-12-13 23:57:00,464 | INFO     | number of running child processes to parent process 15879: 1
[2025-12-13 18:57:33] 2025-12-13 23:57:00,464 | INFO     | maximum number of monitored processes: 6
[2025-12-13 18:57:33] 2025-12-13 23:57:00,464 | INFO     | aborting job monitoring since job object (job id=6929400754) has expired
[2025-12-13 18:57:33] 2025-12-13 23:57:00,563 | INFO     | process IDs to be killed: [15879] (in reverse order)
[2025-12-13 18:57:33] 2025-12-13 23:57:00,621 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:57:33] 2025-12-13 23:57:00,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:57:33] 2025-12-13 23:57:00,627 | INFO     | did not find any defunct processes belonging to 15879
[2025-12-13 18:57:33] 2025-12-13 23:57:00,632 | INFO     | did not find any defunct processes belonging to 15879
[2025-12-13 18:57:33] 2025-12-13 23:57:00,633 | INFO     | ready for new job
[2025-12-13 18:57:33] 2025-12-13 23:57:00,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:57:33] 2025-12-13 23:57:00,635 | INFO     | ***************************************
[2025-12-13 18:57:33] 2025-12-13 23:57:00,635 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:57:33] 2025-12-13 23:57:00,635 | INFO     | ***************************************
[2025-12-13 18:57:33] 2025-12-13 23:57:00,635 | INFO     | 
[2025-12-13 18:57:33] 2025-12-13 23:57:00,636 | INFO     | architecture information:
[2025-12-13 18:57:33] 2025-12-13 23:57:00,637 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:57:33] 2025-12-13 23:57:00,654 | INFO     | cat /etc/os-release:
[2025-12-13 18:57:33] NAME="CentOS Linux"
[2025-12-13 18:57:33] VERSION="7 (Core)"
[2025-12-13 18:57:33] ID="centos"
[2025-12-13 18:57:33] ID_LIKE="rhel fedora"
[2025-12-13 18:57:33] VERSION_ID="7"
[2025-12-13 18:57:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:57:33] ANSI_COLOR="0;31"
[2025-12-13 18:57:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:57:33] HOME_URL="https://www.centos.org/"
[2025-12-13 18:57:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:57:33] 
[2025-12-13 18:57:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:57:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:57:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:57:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:57:33] 
[2025-12-13 18:57:33] 2025-12-13 23:57:00,654 | INFO     | ***************************************
[2025-12-13 18:57:33] 2025-12-13 23:57:01,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 18:57:33] 2025-12-13 23:57:01,171 | INFO     | sufficient remaining disk space (28158459904 B)
[2025-12-13 18:57:33] 2025-12-13 23:57:01,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:57:33] 2025-12-13 23:57:01,172 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:57:33] 2025-12-13 23:57:01,172 | INFO     | update_server=False
[2025-12-13 18:57:33] 2025-12-13 23:57:01,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:57:33] 2025-12-13 23:57:01,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:57:33] 2025-12-13 23:57:01,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:57:33] 2025-12-13 23:57:01,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:57:33] 2025-12-13 23:57:01,174 | INFO     | will abort loop
[2025-12-13 18:57:33] 2025-12-13 23:57:01,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:57:33] 2025-12-13 23:57:01,455 | INFO     | all payload control threads have been joined
[2025-12-13 18:57:33] 2025-12-13 23:57:01,573 | INFO     | all data control threads have been joined
[2025-12-13 18:57:33] 2025-12-13 23:57:01,922 | INFO     | all job control threads have been joined
[2025-12-13 18:57:33] 2025-12-13 23:57:02,178 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,179 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,179 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,404 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,458 | INFO     | [payload] control thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,579 | INFO     | [data] control thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,818 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,853 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,870 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:02,927 | INFO     | [job] control thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:03,178 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:03,267 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:03,284 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:03,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:03,657 | INFO     | [job] validate thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:05,439 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:57:33] 2025-12-13 23:57:26,517 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:57:33] 2025-12-13 23:57:27,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970548483904)>', '<ExcThread(monitor, started 139969897166592)>']
[2025-12-13 18:57:33] 2025-12-13 23:57:31,647 | INFO     | PID=9425 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 18:57:33] 2025-12-13 23:57:31,648 | INFO     | .. there are 3 such processes running
[2025-12-13 18:57:33] 2025-12-13 23:57:31,648 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:57:33] 2025-12-13 23:57:31,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:57:33] 2025-12-13 23:57:31,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:57:33] 2025-12-13 23:57:31,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:57:33] 2025-12-13 23:57:31,649 | INFO     | [monitor] control thread has ended
[2025-12-13 18:57:33] 2025-12-13 23:57:32,988 | INFO     | all workflow threads have been joined
[2025-12-13 18:57:33] 2025-12-13 23:57:32,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:57:33] 2025-12-13 23:57:32,988 | INFO     | traces error code: 0
[2025-12-13 18:57:33] 2025-12-13 23:57:32,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:57:33] 2025-12-13 23:57:33,080 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:57:33] 2025-12-13 23:57:33,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:57:33] 2025-12-13 23:57:33,085 [wrapper] pilotpid: 9425
[2025-12-13 18:57:33] 2025-12-13 23:57:33,088 [wrapper] Pilot exit status: 0
[2025-12-13 18:57:33] 2025-12-13 23:57:33,098 [wrapper] pandaids: 6929400754
[2025-12-13 18:57:33] 2025-12-13 23:57:33,135 [wrapper] cleanup supervisor_pilot  4344 9426
[2025-12-13 18:57:33] 2025-12-13 23:57:33,137 [wrapper] Test setup, not cleaning
[2025-12-13 18:57:33] 2025-12-13 23:57:33,139 [wrapper] apfmon messages muted
[2025-12-13 18:57:33] 2025-12-13 23:57:33,142 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:57:33] 2025-12-13 23:57:33,144 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:57:33]  *** Error codes and diagnostics ***
[2025-12-13 18:57:33]     "exeErrorCode": 0,
[2025-12-13 18:57:33]     "exeErrorDiag": "",
[2025-12-13 18:57:33]     "pilotErrorCode": 0,
[2025-12-13 18:57:33]     "pilotErrorDiag": "",
[2025-12-13 18:57:33]  *** Listing of results directory ***
[2025-12-13 18:57:33] total 372952
[2025-12-13 18:57:33] -rwx------ 1 boincer umatlas     36322 Dec 13 08:47 runpilot2-wrapper.sh
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:51 queuedata.json
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas       100 Dec 13 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:57:33] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 16:00 run_atlas
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas       105 Dec 13 16:00 job.xml
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas 194962910 Dec 13 16:00 EVNT.47899040._000024.pool.root.1
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:00 start_atlas.sh
[2025-12-13 18:57:33] drwxrwx--x 2 boincer umatlas      4096 Dec 13 16:00 shared
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 16:00 input.tar.gz
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas         0 Dec 13 16:00 boinc_lockfile
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas      2491 Dec 13 16:00 pandaJob.out
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas        57 Dec 13 16:00 setup.sh.local
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas    991736 Dec 13 16:01 agis_schedconf.cvmfs.json
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas   1516240 Dec 13 16:01 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:57:33] drwx------ 5 boincer umatlas      4096 Dec 13 16:01 pilot3
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas 179209134 Dec 13 18:56 HITS.47899042._000595.pool.root.1
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas       530 Dec 13 18:56 boinc_task_state.xml
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas        95 Dec 13 18:56 pilot_heartbeat.json
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas      1054 Dec 13 18:56 memory_monitor_summary.json
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas    420644 Dec 13 18:56 log.47899042._000595.job.log.tgz.1
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas      7847 Dec 13 18:56 heartbeat.json
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 18:57 init_data.xml
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 18:57 boinc_mmap_file
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas        28 Dec 13 18:57 wrapper_checkpoint.txt
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas      4822 Dec 13 18:57 pilotlog.txt
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas   1483842 Dec 13 18:57 log.47899042._000595.job.log.1
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas       357 Dec 13 18:57 output.list
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas       620 Dec 13 18:57 runtime_log
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas   1925120 Dec 13 18:57 result.tar.gz
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas       662 Dec 13 18:57 YhULDmb9eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmifPKDmZYUXin.diag
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 18:57 runtime_log.err
[2025-12-13 18:57:33] -rw-r--r-- 1 boincer umatlas     21069 Dec 13 18:57 stderr.txt
[2025-12-13 18:57:33] HITS file was successfully produced:
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas 179209134 Dec 13 18:56 shared/HITS.pool.root.1
[2025-12-13 18:57:33]  *** Contents of shared directory: ***
[2025-12-13 18:57:33] total 367888
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas 194962910 Dec 13 16:00 ATLAS.root_0
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 16:00 start_atlas.sh
[2025-12-13 18:57:33] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 16:00 input.tar.gz
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas 179209134 Dec 13 18:56 HITS.pool.root.1
[2025-12-13 18:57:33] -rw------- 1 boincer umatlas   1925120 Dec 13 18:57 result.tar.gz
18:57:34 (5676): run_atlas exited; CPU time 79644.786289
18:57:34 (5676): called boinc_finish(0)

</stderr_txt>
]]>

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