Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:33 (10814): wrapper (7.7.26015): starting
15:21:33 (10814): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 15:21:33] Arguments: --nthreads 8
[2025-12-13 15:21:33] Threads: 8
[2025-12-13 15:21:33] Checking for CVMFS
[2025-12-13 15:21:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:21:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:21:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:21:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:21:33] 2.11.2.0 11495 142654 137316 153972 2 56 15651024 18432001 1833 130560 0 99093814 99.977 5799816 26409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:21:33] CVMFS is ok
[2025-12-13 15:21:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:21:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:21:33] Further information can be found at the LHC@home message board.
[2025-12-13 15:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:21:33] Checking for apptainer binary...
[2025-12-13 15:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:21:33] Running /usr/bin/apptainer --version
[2025-12-13 15:21:33] apptainer version 1.3.2-1.el7
[2025-12-13 15:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:21:34] c-206-31.aglt2.org
[2025-12-13 15:21:34] apptainer works
[2025-12-13 15:21:34] Set ATHENA_PROC_NUMBER=8
[2025-12-13 15:21:34] Set ATHENA_CORE_NUMBER=8
[2025-12-13 15:21:34] Starting ATLAS job with PandaID=6929312888
[2025-12-13 15:21:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:37:10]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:37:10] 2025-12-13 23:36:18,340 | INFO     | job 6929312888 has finished - writing final server update
[2025-12-13 18:37:10] 2025-12-13 23:36:18,340 | INFO     | total number of processed events: 400 (read)
[2025-12-13 18:37:10] 2025-12-13 23:36:18,340 | INFO     | executing command: lscpu
[2025-12-13 18:37:10] 2025-12-13 23:36:18,367 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 18:37:10] 2025-12-13 23:36:18,491 | INFO     | time since job start (11673s) is within the limit (174528.0s)
[2025-12-13 18:37:10] 2025-12-13 23:36:20,248 | INFO     | monitor loop #843: job 0:6929312888 is in state 'finished'
[2025-12-13 18:37:10] 2025-12-13 23:36:20,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 18:37:10] 2025-12-13 23:36:20,496 | INFO     | time since job start (11675s) is within the limit (174528.0s)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,710 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 18:37:10] 2025-12-13 23:36:21,717 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2489.0416666666665
[2025-12-13 18:37:10] 2025-12-13 23:36:21,721 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929312888/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,722 | INFO     | extracted standard info from prmon json
[2025-12-13 18:37:10] 2025-12-13 23:36:21,722 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:37:10] 2025-12-13 23:36:21,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:37:10] 2025-12-13 23:36:21,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:37:10] 2025-12-13 23:36:21,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:37:10] 2025-12-13 23:36:21,729 | INFO     | fitting pss+swap vs Time
[2025-12-13 18:37:10] 2025-12-13 23:36:21,730 | INFO     | sum of square deviations: 2160561440.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,731 | INFO     | sum of deviations: -19639377792.99999
[2025-12-13 18:37:10] 2025-12-13 23:36:21,731 | INFO     | mean x: 1765663126.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,732 | INFO     | mean y: 2521304.890052356
[2025-12-13 18:37:10] 2025-12-13 23:36:21,732 | INFO     | intersect: 16052296397.924824
[2025-12-13 18:37:10] 2025-12-13 23:36:21,732 | INFO     | chi2: 1.6304747973137579
[2025-12-13 18:37:10] 2025-12-13 23:36:21,733 | INFO     | sum of square deviations: 1995283922.5
[2025-12-13 18:37:10] 2025-12-13 23:36:21,734 | INFO     | sum of deviations: -18705051864.5
[2025-12-13 18:37:10] 2025-12-13 23:36:21,735 | INFO     | mean x: 1765662973.5
[2025-12-13 18:37:10] 2025-12-13 23:36:21,735 | INFO     | mean y: 2522167.1774193547
[2025-12-13 18:37:10] 2025-12-13 23:36:21,735 | INFO     | intersect: 16554962209.476608
[2025-12-13 18:37:10] 2025-12-13 23:36:21,735 | INFO     | chi2: 1.6288946738585912
[2025-12-13 18:37:10] 2025-12-13 23:36:21,736 | INFO     | current chi2=1.6288946738585912 (change=0.09691186013852886 %)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,736 | INFO     | right removable region: 185
[2025-12-13 18:37:10] 2025-12-13 23:36:21,736 | INFO     | sum of square deviations: 1995283922.5
[2025-12-13 18:37:10] 2025-12-13 23:36:21,738 | INFO     | sum of deviations: -47639180187.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,738 | INFO     | mean x: 1765663278.5
[2025-12-13 18:37:10] 2025-12-13 23:36:21,738 | INFO     | mean y: 2546826.935483871
[2025-12-13 18:37:10] 2025-12-13 23:36:21,738 | INFO     | intersect: 42159329691.52084
[2025-12-13 18:37:10] 2025-12-13 23:36:21,739 | INFO     | chi2: 0.2127124763631777
[2025-12-13 18:37:10] 2025-12-13 23:36:21,739 | INFO     | current chi2=0.2127124763631777 (change=86.95395496369363 %)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,739 | INFO     | sum of square deviations: 1838657730.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,741 | INFO     | sum of deviations: -46694509421.00001
[2025-12-13 18:37:10] 2025-12-13 23:36:21,741 | INFO     | mean x: 1765663431.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,741 | INFO     | mean y: 2545852.5303867403
[2025-12-13 18:37:10] 2025-12-13 23:36:21,741 | INFO     | intersect: 44843293735.03307
[2025-12-13 18:37:10] 2025-12-13 23:36:21,742 | INFO     | chi2: 0.19036326695397648
[2025-12-13 18:37:10] 2025-12-13 23:36:21,742 | INFO     | current chi2=0.19036326695397648 (change=10.506769415369396 %)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,742 | INFO     | left removable region: 20
[2025-12-13 18:37:10] 2025-12-13 23:36:21,743 | INFO     | sum of square deviations: 1392881930.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,744 | INFO     | sum of deviations: -34981507984.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,744 | INFO     | mean x: 1765663553.0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,744 | INFO     | mean y: 2536611.6424242426
[2025-12-13 18:37:10] 2025-12-13 23:36:21,744 | INFO     | intersect: 44346261909.54137
[2025-12-13 18:37:10] 2025-12-13 23:36:21,745 | INFO     | chi2: 0.17956196373126215
[2025-12-13 18:37:10] 2025-12-13 23:36:21,745 | INFO     | current memory leak: -25.11 B/s (using 165 data points, chi2=0.18)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | could have reported an average CPU frequency of 2561 MHz (10 samples)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | ..............................
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | . Timing measurements:
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | . get job = 0 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | . initial setup = 2 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,746 | INFO     | . payload setup = 5 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,747 | INFO     | . stage-in = 0 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,747 | INFO     | . payload execution = 11642 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,747 | INFO     | . stage-out = 2 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,747 | INFO     | . log creation = 0 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,747 | INFO     | ..............................
[2025-12-13 18:37:10] 2025-12-13 23:36:21,847 | INFO     | 
[2025-12-13 18:37:10] 2025-12-13 23:36:21,847 | INFO     | job summary report
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | --------------------------------------------------
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | PanDA job id: 6929312888
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | task id: 47886831
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | errors: (none)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:37:10] 2025-12-13 23:36:21,848 | INFO     | pilot state: finished 
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | transexitcode: 0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | exeerrorcode: 0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | exeerrordiag: 
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | exitcode: 0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | exitmsg: OK
[2025-12-13 18:37:10] 2025-12-13 23:36:21,849 | INFO     | cpuconsumptiontime: 88568 s
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | nevents: 400
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | neventsw: 0
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | pid: 20950
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | pgrp: 20950
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | corecount: 8
[2025-12-13 18:37:10] 2025-12-13 23:36:21,850 | INFO     | event service: False
[2025-12-13 18:37:10] 2025-12-13 23:36:21,851 | INFO     | sizes: {0: 2283990, 1: 2283990, 4: 2284280, 12: 2284308, 11651: 2313768, 11654: 2322766, 11657: 2322950, 11661: 2323144}
[2025-12-13 18:37:10] 2025-12-13 23:36:21,851 | INFO     | --------------------------------------------------
[2025-12-13 18:37:10] 2025-12-13 23:36:21,851 | INFO     | 
[2025-12-13 18:37:10] 2025-12-13 23:36:21,851 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 18:37:10] 2025-12-13 23:36:21,871 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:37:10] 2025-12-13 23:36:21,875 | INFO     | job 6929312888 has completed (purged errors)
[2025-12-13 18:37:10] 2025-12-13 23:36:21,875 | INFO     | overall cleanup function is called
[2025-12-13 18:37:10] 2025-12-13 23:36:22,885 | INFO     | --- collectZombieJob: --- 10, [20950]
[2025-12-13 18:37:10] 2025-12-13 23:36:22,885 | INFO     | zombie collector waiting for pid 20950
[2025-12-13 18:37:10] 2025-12-13 23:36:22,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:37:10] 2025-12-13 23:36:22,885 | INFO     | collected zombie processes
[2025-12-13 18:37:10] 2025-12-13 23:36:22,885 | INFO     | will attempt to kill all subprocesses of pid=20950
[2025-12-13 18:37:10] 2025-12-13 23:36:23,041 | INFO     | process IDs to be killed: [20950] (in reverse order)
[2025-12-13 18:37:10] 2025-12-13 23:36:23,085 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:37:10] 2025-12-13 23:36:23,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:37:10] 2025-12-13 23:36:23,090 | INFO     | did not find any defunct processes belonging to 20950
[2025-12-13 18:37:10] 2025-12-13 23:36:23,095 | INFO     | did not find any defunct processes belonging to 20950
[2025-12-13 18:37:10] 2025-12-13 23:36:23,095 | INFO     | ready for new job
[2025-12-13 18:37:10] 2025-12-13 23:36:23,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:37:10] 2025-12-13 23:36:23,098 | INFO     | ***************************************
[2025-12-13 18:37:10] 2025-12-13 23:36:23,098 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:37:10] 2025-12-13 23:36:23,098 | INFO     | ***************************************
[2025-12-13 18:37:10] 2025-12-13 23:36:23,098 | INFO     | 
[2025-12-13 18:37:10] 2025-12-13 23:36:23,099 | INFO     | architecture information:
[2025-12-13 18:37:10] 2025-12-13 23:36:23,100 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:37:10] 2025-12-13 23:36:23,114 | INFO     | cat /etc/os-release:
[2025-12-13 18:37:10] NAME="CentOS Linux"
[2025-12-13 18:37:10] VERSION="7 (Core)"
[2025-12-13 18:37:10] ID="centos"
[2025-12-13 18:37:10] ID_LIKE="rhel fedora"
[2025-12-13 18:37:10] VERSION_ID="7"
[2025-12-13 18:37:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:37:10] ANSI_COLOR="0;31"
[2025-12-13 18:37:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:37:10] HOME_URL="https://www.centos.org/"
[2025-12-13 18:37:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:37:10] 
[2025-12-13 18:37:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:37:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:37:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:37:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:37:10] 
[2025-12-13 18:37:10] 2025-12-13 23:36:23,115 | INFO     | ***************************************
[2025-12-13 18:37:10] 2025-12-13 23:36:23,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 18:37:10] 2025-12-13 23:36:23,657 | INFO     | sufficient remaining disk space (28384952320 B)
[2025-12-13 18:37:10] 2025-12-13 23:36:23,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:37:10] 2025-12-13 23:36:23,657 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:37:10] 2025-12-13 23:36:23,658 | INFO     | update_server=False
[2025-12-13 18:37:10] 2025-12-13 23:36:23,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:37:10] 2025-12-13 23:36:23,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:37:10] 2025-12-13 23:36:23,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:37:10] 2025-12-13 23:36:23,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:37:10] 2025-12-13 23:36:23,757 | INFO     | aborting loop
[2025-12-13 18:37:10] 2025-12-13 23:36:23,973 | INFO     | all data control threads have been joined
[2025-12-13 18:37:10] 2025-12-13 23:36:24,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:37:10] 2025-12-13 23:36:24,379 | INFO     | all job control threads have been joined
[2025-12-13 18:37:10] 2025-12-13 23:36:24,635 | INFO     | all payload control threads have been joined
[2025-12-13 18:37:10] 2025-12-13 23:36:24,664 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,664 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,762 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,892 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,977 | INFO     | [data] control thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:24,984 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,240 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,384 | INFO     | [job] control thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,408 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,640 | INFO     | [payload] control thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,665 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:25,985 | INFO     | [job] validate thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:26,063 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:26,130 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:28,363 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:37:10] 2025-12-13 23:36:42,702 [wrapper] supervise_pilot (15 min periods counter: 14)
[2025-12-13 18:37:10] 2025-12-13 23:36:53,713 | INFO     | PID=14525 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 18:37:10] 2025-12-13 23:36:53,713 | INFO     | .. there are 3 such processes running
[2025-12-13 18:37:10] 2025-12-13 23:36:53,714 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:37:10] 2025-12-13 23:36:53,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:37:10] 2025-12-13 23:36:53,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:37:10] 2025-12-13 23:37:03,559 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:37:10] 2025-12-13 23:37:04,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070657058624)>', '<ExcThread(monitor, started 140070438463232)>']
[2025-12-13 18:37:10] 2025-12-13 23:37:05,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:37:10] 2025-12-13 23:37:05,775 | INFO     | [monitor] control thread has ended
[2025-12-13 18:37:10] 2025-12-13 23:37:09,846 | INFO     | all workflow threads have been joined
[2025-12-13 18:37:10] 2025-12-13 23:37:09,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:37:10] 2025-12-13 23:37:09,847 | INFO     | traces error code: 0
[2025-12-13 18:37:10] 2025-12-13 23:37:09,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:37:10] 2025-12-13 23:37:09,967 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:37:10] 2025-12-13 23:37:09,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:37:10] 2025-12-13 23:37:09,971 [wrapper] pilotpid: 14525
[2025-12-13 18:37:10] 2025-12-13 23:37:09,973 [wrapper] Pilot exit status: 0
[2025-12-13 18:37:10] 2025-12-13 23:37:09,982 [wrapper] pandaids: 6929312888
[2025-12-13 18:37:10] 2025-12-13 23:37:10,021 [wrapper] cleanup supervisor_pilot 20262 14526
[2025-12-13 18:37:10] 2025-12-13 23:37:10,023 [wrapper] Test setup, not cleaning
[2025-12-13 18:37:10] 2025-12-13 23:37:10,025 [wrapper] apfmon messages muted
[2025-12-13 18:37:10] 2025-12-13 23:37:10,027 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:37:10] 2025-12-13 23:37:10,031 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:37:10]  *** Error codes and diagnostics ***
[2025-12-13 18:37:10]     "exeErrorCode": 0,
[2025-12-13 18:37:10]     "exeErrorDiag": "",
[2025-12-13 18:37:10]     "pilotErrorCode": 0,
[2025-12-13 18:37:10]     "pilotErrorDiag": "",
[2025-12-13 18:37:10]  *** Listing of results directory ***
[2025-12-13 18:37:10] total 351592
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 18:37:10] -rwx------ 1 boincer umatlas     36322 Dec 13 08:46 runpilot2-wrapper.sh
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:47 queuedata.json
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:37:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:21 run_atlas
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:21 job.xml
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas 196220237 Dec 13 15:21 EVNT.47886829._000229.pool.root.1
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:21 start_atlas.sh
[2025-12-13 18:37:10] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:21 shared
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas    592412 Dec 13 15:21 input.tar.gz
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:21 boinc_lockfile
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 15:21 pandaJob.out
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas        57 Dec 13 15:21 setup.sh.local
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas    991736 Dec 13 15:21 agis_schedconf.cvmfs.json
[2025-12-13 18:37:10] drwx------ 5 boincer umatlas      4096 Dec 13 15:21 pilot3
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 18:27 init_data.xml
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas 155767746 Dec 13 18:35 HITS.47886831._005717.pool.root.1
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas       530 Dec 13 18:36 boinc_task_state.xml
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas      1053 Dec 13 18:36 memory_monitor_summary.json
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas   1516240 Dec 13 18:36 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas    420901 Dec 13 18:36 log.47886831._005717.job.log.tgz.1
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas      7857 Dec 13 18:36 heartbeat.json
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas        95 Dec 13 18:36 pilot_heartbeat.json
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas        28 Dec 13 18:37 wrapper_checkpoint.txt
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas      4821 Dec 13 18:37 pilotlog.txt
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 18:37 boinc_mmap_file
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas   1634910 Dec 13 18:37 log.47886831._005717.job.log.1
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas       357 Dec 13 18:37 output.list
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas       620 Dec 13 18:37 runtime_log
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas   2078720 Dec 13 18:37 result.tar.gz
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 18:37 runtime_log.err
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas       662 Dec 13 18:37 GELMDmt7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1fTKDmEjpKNn.diag
[2025-12-13 18:37:10] -rw-r--r-- 1 boincer umatlas     21312 Dec 13 18:37 stderr.txt
[2025-12-13 18:37:10] HITS file was successfully produced:
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas 155767746 Dec 13 18:35 shared/HITS.pool.root.1
[2025-12-13 18:37:10]  *** Contents of shared directory: ***
[2025-12-13 18:37:10] total 346380
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas 196220237 Dec 13 15:21 ATLAS.root_0
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:21 start_atlas.sh
[2025-12-13 18:37:10] -rw-r--r-- 2 boincer umatlas    592412 Dec 13 15:21 input.tar.gz
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas 155767746 Dec 13 18:35 HITS.pool.root.1
[2025-12-13 18:37:10] -rw------- 1 boincer umatlas   2078720 Dec 13 18:37 result.tar.gz
18:37:12 (10814): run_atlas exited; CPU time 88703.475810
18:37:12 (10814): called boinc_finish(0)

</stderr_txt>
]]>

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