Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:28 (1732365): wrapper (7.7.26015): starting
11:46:28 (1732365): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 11:46:28] Arguments: --nthreads 4
[2025-12-15 11:46:28] Threads: 4
[2025-12-15 11:46:28] Checking for CVMFS
[2025-12-15 11:46:28] No cvmfs_config command found, will try listing directly
[2025-12-15 11:46:28] CVMFS is ok
[2025-12-15 11:46:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 11:46:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 11:46:28] Further information can be found at the LHC@home message board.
[2025-12-15 11:46:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 11:46:28] Checking for apptainer binary...
[2025-12-15 11:46:28] which: no apptainer in ((null))
[2025-12-15 11:46:28] apptainer is not installed, using version from CVMFS
[2025-12-15 11:46:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 11:46:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-12-15 11:46:29] apptainer works
[2025-12-15 11:46:29] Set ATHENA_PROC_NUMBER=4
[2025-12-15 11:46:29] Set ATHENA_CORE_NUMBER=4
[2025-12-15 11:46:29] Starting ATLAS job with PandaID=6929312882
[2025-12-15 11:46:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 17:06:21]  *** The last 200 lines of the pilot log: ***
[2025-12-15 17:06:21] 2025-12-15 15:03:06,597 | INFO     | PID=1736353 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 17:06:21] 2025-12-15 15:03:06,598 | INFO     | .. there are 3 such processes running
[2025-12-15 17:06:21] 2025-12-15 15:03:06,622 | WARNING  | process 1743140 can no longer be monitored (due to stat problems) - aborting
[2025-12-15 17:06:21] 2025-12-15 15:03:06,623 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6929312882/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,911 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 17:06:21] 2025-12-15 15:03:06,932 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2480.758775
[2025-12-15 17:06:21] 2025-12-15 15:03:06,943 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6929312882/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,944 | INFO     | extracted standard info from prmon json
[2025-12-15 17:06:21] 2025-12-15 15:03:06,944 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 17:06:21] 2025-12-15 15:03:06,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 17:06:21] 2025-12-15 15:03:06,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 17:06:21] 2025-12-15 15:03:06,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 17:06:21] 2025-12-15 15:03:06,950 | INFO     | fitting pss+swap vs Time
[2025-12-15 17:06:21] 2025-12-15 15:03:06,951 | INFO     | sum of square deviations: 4962187923.0
[2025-12-15 17:06:21] 2025-12-15 15:03:06,953 | INFO     | sum of deviations: -13352086473.500002
[2025-12-15 17:06:21] 2025-12-15 15:03:06,954 | INFO     | mean x: 1765803282.5
[2025-12-15 17:06:21] 2025-12-15 15:03:06,954 | INFO     | mean y: 2349574.035714286
[2025-12-15 17:06:21] 2025-12-15 15:03:06,954 | INFO     | intersect: 4753712982.472705
[2025-12-15 17:06:21] 2025-12-15 15:03:06,954 | INFO     | chi2: 1.5750352092074147
[2025-12-15 17:06:21] 2025-12-15 15:03:06,955 | INFO     | sum of square deviations: 4672638308.0
[2025-12-15 17:06:21] 2025-12-15 15:03:06,957 | INFO     | sum of deviations: -12897318693.999996
[2025-12-15 17:06:21] 2025-12-15 15:03:06,958 | INFO     | mean x: 1765803130.0
[2025-12-15 17:06:21] 2025-12-15 15:03:06,958 | INFO     | mean y: 2349813.5829959516
[2025-12-15 17:06:21] 2025-12-15 15:03:06,958 | INFO     | intersect: 4876282743.397239
[2025-12-15 17:06:21] 2025-12-15 15:03:06,958 | INFO     | chi2: 1.574524243985277
[2025-12-15 17:06:21] 2025-12-15 15:03:06,959 | INFO     | current chi2=1.574524243985277 (change=0.032441511094530334 %)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,959 | INFO     | right removable region: 246
[2025-12-15 17:06:21] 2025-12-15 15:03:06,959 | INFO     | sum of square deviations: 4672638308.0
[2025-12-15 17:06:21] 2025-12-15 15:03:06,961 | INFO     | sum of deviations: -40044018092.99997
[2025-12-15 17:06:21] 2025-12-15 15:03:06,962 | INFO     | mean x: 1765803435.0
[2025-12-15 17:06:21] 2025-12-15 15:03:06,962 | INFO     | mean y: 2363442.165991903
[2025-12-15 17:06:21] 2025-12-15 15:03:06,962 | INFO     | intersect: 15135112873.843487
[2025-12-15 17:06:21] 2025-12-15 15:03:06,962 | INFO     | chi2: 0.32891877848687295
[2025-12-15 17:06:21] 2025-12-15 15:03:06,963 | INFO     | current chi2=0.32891877848687295 (change=79.11673487906403 %)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,963 | INFO     | sum of square deviations: 4394577280.5
[2025-12-15 17:06:21] 2025-12-15 15:03:06,965 | INFO     | sum of deviations: -30296839835.500004
[2025-12-15 17:06:21] 2025-12-15 15:03:06,965 | INFO     | mean x: 1765803587.5
[2025-12-15 17:06:21] 2025-12-15 15:03:06,966 | INFO     | mean y: 2358082.838842975
[2025-12-15 17:06:21] 2025-12-15 15:03:06,966 | INFO     | intersect: 12176058772.738182
[2025-12-15 17:06:21] 2025-12-15 15:03:06,966 | INFO     | chi2: 0.2932052623852331
[2025-12-15 17:06:21] 2025-12-15 15:03:06,966 | INFO     | current chi2=0.2932052623852331 (change=10.857852587782602 %)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,967 | INFO     | left removable region: 20
[2025-12-15 17:06:21] 2025-12-15 15:03:06,967 | INFO     | sum of square deviations: 3579276412.5
[2025-12-15 17:06:21] 2025-12-15 15:03:06,969 | INFO     | sum of deviations: -3136984840.9999986
[2025-12-15 17:06:21] 2025-12-15 15:03:06,969 | INFO     | mean x: 1765803709.5
[2025-12-15 17:06:21] 2025-12-15 15:03:06,969 | INFO     | mean y: 2342450.407079646
[2025-12-15 17:06:21] 2025-12-15 15:03:06,969 | INFO     | intersect: 1549945605.4855826
[2025-12-15 17:06:21] 2025-12-15 15:03:06,970 | INFO     | chi2: 0.09127562091831545
[2025-12-15 17:06:21] 2025-12-15 15:03:06,970 | INFO     | current memory leak: -0.88 B/s (using 226 data points, chi2=0.09)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,971 | INFO     | could have reported an average CPU frequency of 2502 MHz (12 samples)
[2025-12-15 17:06:21] 2025-12-15 15:03:06,971 | INFO     | ..............................
[2025-12-15 17:06:21] 2025-12-15 15:03:06,971 | INFO     | . Timing measurements:
[2025-12-15 17:06:21] 2025-12-15 15:03:06,971 | INFO     | . get job = 0 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . initial setup = 1 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . payload setup = 5 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . stage-in = 0 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . payload execution = 15354 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . stage-out = 1 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | . log creation = 0 s
[2025-12-15 17:06:21] 2025-12-15 15:03:06,972 | INFO     | ..............................
[2025-12-15 17:06:21] 2025-12-15 15:03:07,105 | INFO     | 
[2025-12-15 17:06:21] 2025-12-15 15:03:07,105 | INFO     | job summary report
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | --------------------------------------------------
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | PanDA job id: 6929312882
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | task id: 47886831
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | errors: (none)
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 17:06:21] 2025-12-15 15:03:07,106 | INFO     | pilot state: finished 
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | transexitcode: 0
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | exeerrorcode: 0
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | exeerrordiag: 
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | exitcode: 0
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | exitmsg: OK
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | cpuconsumptiontime: 58580 s
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | nevents: 400
[2025-12-15 17:06:21] 2025-12-15 15:03:07,107 | INFO     | neventsw: 0
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | pid: 1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | pgrp: 1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | corecount: 4
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | event service: False
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | sizes: {0: 2283160, 1: 2284027, 5: 2284289, 12: 2284345, 15363: 2315507, 15364: 2315506, 15366: 2324766, 15370: 2324904}
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | --------------------------------------------------
[2025-12-15 17:06:21] 2025-12-15 15:03:07,108 | INFO     | 
[2025-12-15 17:06:21] 2025-12-15 15:03:07,109 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-12-15 17:06:21] 2025-12-15 15:03:07,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 17:06:21] 2025-12-15 15:03:07,134 | INFO     | job 6929312882 has completed (purged errors)
[2025-12-15 17:06:21] 2025-12-15 15:03:07,134 | INFO     | overall cleanup function is called
[2025-12-15 17:06:21] 2025-12-15 15:03:07,194 | INFO     | number of running child processes to parent process 1743140: 1
[2025-12-15 17:06:21] 2025-12-15 15:03:07,194 | INFO     | maximum number of monitored processes: 6
[2025-12-15 17:06:21] 2025-12-15 15:03:07,194 | INFO     | aborting job monitoring since job object (job id=6929312882) has expired
[2025-12-15 17:06:21] 2025-12-15 15:03:08,165 | INFO     | --- collectZombieJob: --- 10, [1743140]
[2025-12-15 17:06:21] 2025-12-15 15:03:08,166 | INFO     | zombie collector waiting for pid 1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:08,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 17:06:21] 2025-12-15 15:03:08,166 | INFO     | collected zombie processes
[2025-12-15 17:06:21] 2025-12-15 15:03:08,166 | INFO     | will attempt to kill all subprocesses of pid=1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:08,575 | INFO     | process IDs to be killed: [1743140] (in reverse order)
[2025-12-15 17:06:21] 2025-12-15 15:03:08,665 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 17:06:21] 2025-12-15 15:03:08,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 17:06:21] 2025-12-15 15:03:08,675 | INFO     | did not find any defunct processes belonging to 1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:08,684 | INFO     | did not find any defunct processes belonging to 1743140
[2025-12-15 17:06:21] 2025-12-15 15:03:08,685 | INFO     | ready for new job
[2025-12-15 17:06:21] 2025-12-15 15:03:08,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 17:06:21] 2025-12-15 15:03:08,687 | INFO     | ***************************************
[2025-12-15 17:06:21] 2025-12-15 15:03:08,687 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 17:06:21] 2025-12-15 15:03:08,687 | INFO     | ***************************************
[2025-12-15 17:06:21] 2025-12-15 15:03:08,688 | INFO     | 
[2025-12-15 17:06:21] 2025-12-15 15:03:08,690 | INFO     | architecture information:
[2025-12-15 17:06:21] 2025-12-15 15:03:08,690 | INFO     | executing command: cat /etc/os-release
[2025-12-15 17:06:21] 2025-12-15 15:03:08,705 | INFO     | cat /etc/os-release:
[2025-12-15 17:06:21] NAME="CentOS Linux"
[2025-12-15 17:06:21] VERSION="7 (Core)"
[2025-12-15 17:06:21] ID="centos"
[2025-12-15 17:06:21] ID_LIKE="rhel fedora"
[2025-12-15 17:06:21] VERSION_ID="7"
[2025-12-15 17:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 17:06:21] ANSI_COLOR="0;31"
[2025-12-15 17:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 17:06:21] HOME_URL="https://www.centos.org/"
[2025-12-15 17:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 17:06:21] 
[2025-12-15 17:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 17:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 17:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 17:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 17:06:21] 
[2025-12-15 17:06:21] 2025-12-15 15:03:08,705 | INFO     | ***************************************
[2025-12-15 17:06:21] 2025-12-15 15:03:09,207 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-12-15 17:06:21] 2025-12-15 15:03:09,222 | INFO     | sufficient remaining disk space (1672276344832 B)
[2025-12-15 17:06:21] 2025-12-15 15:03:09,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 17:06:21] 2025-12-15 15:03:09,223 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 17:06:21] 2025-12-15 15:03:09,223 | INFO     | update_server=False
[2025-12-15 17:06:21] 2025-12-15 15:03:09,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 17:06:21] 2025-12-15 15:03:09,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 17:06:21] 2025-12-15 15:03:09,696 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 17:06:21] 2025-12-15 15:03:09,697 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 17:06:21] 2025-12-15 15:03:09,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:06:21] 2025-12-15 15:03:09,697 | INFO     | will abort loop
[2025-12-15 17:06:21] 2025-12-15 15:03:09,937 | INFO     | all data control threads have been joined
[2025-12-15 17:06:21] 2025-12-15 15:03:10,228 | INFO     | [job] retrieve thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:10,503 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:10,628 | INFO     | all payload control threads have been joined
[2025-12-15 17:06:21] 2025-12-15 15:03:10,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 17:06:21] 2025-12-15 15:03:10,701 | INFO     | [job] job monitor thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:10,728 | INFO     | all job control threads have been joined
[2025-12-15 17:06:21] 2025-12-15 15:03:10,894 | INFO     | [job] validate thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:10,942 | INFO     | [data] control thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:10,968 | INFO     | [payload] failed_post thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,252 | INFO     | [payload] validate_post thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,374 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,451 | INFO     | [data] copytool_in thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,632 | INFO     | [payload] control thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,653 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:11,733 | INFO     | [job] control thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:12,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:06:21] 2025-12-15 15:03:12,706 | INFO     | [data] copytool_out thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:13,103 | INFO     | [job] queue monitor thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:13,229 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 17:06:21] 2025-12-15 15:03:39,141 | INFO     | PID=1736353 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 17:06:21] 2025-12-15 15:03:39,142 | INFO     | .. there are 3 such processes running
[2025-12-15 17:06:21] 2025-12-15 15:03:39,142 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 17:06:21] 2025-12-15 15:03:39,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 17:06:21] 2025-12-15 15:03:39,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 17:06:21] 2025-12-15 15:04:06,229 | INFO     | [monitor] cgroup control has ended
[2025-12-15 17:06:21] 2025-12-15 15:04:07,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23073220007744)>', '<ExcThread(monitor, started 23072983713536)>']
[2025-12-15 17:06:21] 2025-12-15 15:04:07,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 17:06:21] 2025-12-15 15:04:07,266 | INFO     | [monitor] control thread has ended
[2025-12-15 17:06:21] 2025-12-15 15:04:12,257 | INFO     | all workflow threads have been joined
[2025-12-15 17:06:21] 2025-12-15 15:04:12,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 17:06:21] 2025-12-15 15:04:12,258 | INFO     | traces error code: 0
[2025-12-15 17:06:21] 2025-12-15 15:04:12,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 17:06:21] 2025-12-15 15:04:12,400 [wrapper] ==== pilot stdout END ====
[2025-12-15 17:06:21] 2025-12-15 15:04:12,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 17:06:21] 2025-12-15 15:04:12,406 [wrapper] pilotpid: 1736353
[2025-12-15 17:06:21] 2025-12-15 15:04:12,409 [wrapper] Pilot exit status: 0
[2025-12-15 17:06:21] 2025-12-15 15:04:12,419 [wrapper] pandaids: 6929312882
[2025-12-15 17:06:21] 2025-12-15 15:04:12,479 [wrapper] cleanup supervisor_pilot 1936432 1736354
[2025-12-15 17:06:21] 2025-12-15 15:04:12,482 [wrapper] Test setup, not cleaning
[2025-12-15 17:06:21] 2025-12-15 15:04:12,485 [wrapper] apfmon messages muted
[2025-12-15 17:06:21] 2025-12-15 15:04:12,488 [wrapper] ==== wrapper stdout END ====
[2025-12-15 17:06:21] 2025-12-15 15:04:12,490 [wrapper] ==== wrapper stderr END ====
[2025-12-15 17:06:21]  *** Error codes and diagnostics ***
[2025-12-15 17:06:21]     "exeErrorCode": 0,
[2025-12-15 17:06:21]     "exeErrorDiag": "",
[2025-12-15 17:06:21]     "pilotErrorCode": 0,
[2025-12-15 17:06:21]     "pilotErrorDiag": "",
[2025-12-15 17:06:21]  *** Listing of results directory ***
[2025-12-15 17:06:21] total 343972
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc    579449 Dec 13 14:45 pilot3.tar.gz
[2025-12-15 17:06:21] -rwx------ 1 boinc boinc     36322 Dec 13 14:46 runpilot2-wrapper.sh
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc      5112 Dec 13 14:47 queuedata.json
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc       100 Dec 15 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 17:06:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 11:46 run_atlas
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc       105 Dec 15 11:46 job.xml
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc 196220237 Dec 15 11:46 EVNT.47886829._000229.pool.root.1
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc      6424 Dec 15 11:46 init_data.xml
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:46 start_atlas.sh
[2025-12-15 17:06:21] drwxrwx--x 2 boinc boinc      4096 Dec 15 11:46 shared
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc    592408 Dec 15 11:46 input.tar.gz
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc         0 Dec 15 11:46 boinc_lockfile
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc      2537 Dec 15 11:46 pandaJob.out
[2025-12-15 17:06:21] -rw------- 1 boinc boinc    990996 Dec 15 11:46 agis_schedconf.cvmfs.json
[2025-12-15 17:06:21] drwx------ 5 boinc boinc      4096 Dec 15 11:46 pilot3
[2025-12-15 17:06:21] -rw------- 1 boinc boinc 146941084 Dec 15 16:02 HITS.47886831._005711.pool.root.1
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc       528 Dec 15 16:02 boinc_task_state.xml
[2025-12-15 17:06:21] -rw------- 1 boinc boinc      1031 Dec 15 16:02 memory_monitor_summary.json
[2025-12-15 17:06:21] -rw------- 1 boinc boinc   1516240 Dec 15 16:03 agis_ddmendpoints.agis.ALL.json
[2025-12-15 17:06:21] -rw------- 1 boinc boinc    407178 Dec 15 16:03 log.47886831._005711.job.log.tgz.1
[2025-12-15 17:06:21] -rw------- 1 boinc boinc      7820 Dec 15 16:03 heartbeat.json
[2025-12-15 17:06:21] -rw------- 1 boinc boinc        95 Dec 15 16:03 pilot_heartbeat.json
[2025-12-15 17:06:21] -rw------- 1 boinc boinc      5020 Dec 15 16:04 pilotlog.txt
[2025-12-15 17:06:21] -rw------- 1 boinc boinc   2168756 Dec 15 16:04 log.47886831._005711.job.log.1
[2025-12-15 17:06:21] -rw------- 1 boinc boinc       357 Dec 15 16:04 output.list
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc       620 Dec 15 16:04 runtime_log
[2025-12-15 17:06:21] -rw------- 1 boinc boinc   2590720 Dec 15 16:04 result.tar.gz
[2025-12-15 17:06:21] -rw------- 1 boinc boinc       666 Dec 15 16:04 acGMDmt7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxfTKDmaHECXn.diag
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc      9206 Dec 15 16:04 runtime_log.err
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc        27 Dec 15 17:06 wrapper_checkpoint.txt
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc      8192 Dec 15 17:06 boinc_mmap_file
[2025-12-15 17:06:21] -rw-r--r-- 1 boinc boinc     21218 Dec 15 17:06 stderr.txt
[2025-12-15 17:06:21] HITS file was successfully produced:
[2025-12-15 17:06:21] -rw------- 1 boinc boinc 146941084 Dec 15 16:02 shared/HITS.pool.root.1
[2025-12-15 17:06:21]  *** Contents of shared directory: ***
[2025-12-15 17:06:21] total 338260
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc 196220237 Dec 15 11:46 ATLAS.root_0
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc     15847 Dec 15 11:46 start_atlas.sh
[2025-12-15 17:06:21] -rw-r--r-- 2 boinc boinc    592408 Dec 15 11:46 input.tar.gz
[2025-12-15 17:06:21] -rw------- 1 boinc boinc 146941084 Dec 15 16:02 HITS.pool.root.1
[2025-12-15 17:06:21] -rw------- 1 boinc boinc   2590720 Dec 15 16:04 result.tar.gz
17:06:23 (1732365): run_atlas exited; CPU time 59237.456801
17:06:23 (1732365): called boinc_finish(0)

</stderr_txt>
]]>

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