Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:28 (29191): wrapper (7.7.26015): starting
15:12:28 (29191): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 15:12:28] Arguments: --nthreads 12
[2025-12-13 15:12:28] Threads: 12
[2025-12-13 15:12:28] Checking for CVMFS
[2025-12-13 15:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:12:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:12:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:12:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:12:28] 2.11.2.0 2998 128339 100980 153971 4 59 13565472 20275201 1 130560 0 53049379 99.955 5701282 35305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:12:28] CVMFS is ok
[2025-12-13 15:12:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:12:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:12:28] Further information can be found at the LHC@home message board.
[2025-12-13 15:12:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:12:28] Checking for apptainer binary...
[2025-12-13 15:12:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:12:28] Running /usr/bin/apptainer --version
[2025-12-13 15:12:28] apptainer version 1.3.2-1.el7
[2025-12-13 15:12:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:12:30] c-205-12.aglt2.org
[2025-12-13 15:12:30] apptainer works
[2025-12-13 15:12:30] Set ATHENA_PROC_NUMBER=12
[2025-12-13 15:12:30] Set ATHENA_CORE_NUMBER=12
[2025-12-13 15:12:30] Starting ATLAS job with PandaID=6929311538
[2025-12-13 15:12:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:26:57]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:26:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 16:26:57]  replicas=None
[2025-12-13 16:26:57]  scope=mc23_13p6TeV
[2025-12-13 16:26:57]  status=None
[2025-12-13 16:26:57]  status_code=0
[2025-12-13 16:26:57]  storage_token=
[2025-12-13 16:26:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929311538/log.47886831._005549.job.log.tgz.1
[2025-12-13 16:26:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/e1/log.47886831._005549.job.log.tgz.1
[2025-12-13 16:26:57]  workdir=None
[2025-12-13 16:26:57] ]
[2025-12-13 16:26:57] 2025-12-13 21:26:11,327 | INFO     | transferring file log.47886831._005549.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929311538/log.47886831._005549.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 16:26:57] 2025-12-13 21:26:11,328 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929311538/log.47886831._005549.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._005549.job
[2025-12-13 16:26:57] 2025-12-13 21:26:11,350 | INFO     | adding to output.list: log.47886831._005549.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/e1/log.47886831._005549.job.log.tg
[2025-12-13 16:26:57] 2025-12-13 21:26:11,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 16:26:57] 2025-12-13 21:26:11,351 | INFO     | summary of transferred files:
[2025-12-13 16:26:57] 2025-12-13 21:26:11,351 | INFO     |  -- lfn=log.47886831._005549.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 16:26:57] 2025-12-13 21:26:11,351 | INFO     | stage-out finished correctly
[2025-12-13 16:26:57] 2025-12-13 21:26:11,656 | INFO     | time since job start (4406s) is within the limit (174528.0s)
[2025-12-13 16:26:57] 2025-12-13 21:26:13,367 | INFO     | monitor loop #330: job 0:6929311538 is in state 'finished'
[2025-12-13 16:26:57] 2025-12-13 21:26:13,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:26:57] 2025-12-13 21:26:13,662 | INFO     | time since job start (4408s) is within the limit (174528.0s)
[2025-12-13 16:26:57] 2025-12-13 21:26:13,671 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 16:26:57] 2025-12-13 21:26:15,667 | INFO     | time since job start (4410s) is within the limit (174528.0s)
[2025-12-13 16:26:57] 2025-12-13 21:26:15,791 | INFO     | job 6929311538 has state=finished
[2025-12-13 16:26:57] 2025-12-13 21:26:15,792 | INFO     | preparing for final server update for job 6929311538 in state='finished'
[2025-12-13 16:26:57] 2025-12-13 21:26:15,792 | INFO     | this job has now completed (state=finished)
[2025-12-13 16:26:57] 2025-12-13 21:26:15,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 16:26:57] 2025-12-13 21:26:15,792 | INFO     | log transfer has been attempted: DONE
[2025-12-13 16:26:57] 2025-12-13 21:26:15,793 | INFO     | job 6929311538 has finished - writing final server update
[2025-12-13 16:26:57] 2025-12-13 21:26:15,793 | INFO     | total number of processed events: 400 (read)
[2025-12-13 16:26:57] 2025-12-13 21:26:15,795 | INFO     | executing command: lscpu
[2025-12-13 16:26:57] 2025-12-13 21:26:15,826 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 16:26:57] 2025-12-13 21:26:15,870 | INFO     | monitor loop #331: job 0:6929311538 is in state 'finished'
[2025-12-13 16:26:57] 2025-12-13 21:26:15,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:26:57] 2025-12-13 21:26:17,673 | INFO     | time since job start (4412s) is within the limit (174528.0s)
[2025-12-13 16:26:57] 2025-12-13 21:26:18,374 | INFO     | monitor loop #332: job 0:6929311538 is in state 'finished'
[2025-12-13 16:26:57] 2025-12-13 21:26:18,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:26:57] 2025-12-13 21:26:19,679 | INFO     | time since job start (4414s) is within the limit (174528.0s)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,683 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 16:26:57] 2025-12-13 21:26:20,695 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-13 16:26:57] 2025-12-13 21:26:20,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929311538/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,698 | INFO     | extracted standard info from prmon json
[2025-12-13 16:26:57] 2025-12-13 21:26:20,698 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:26:57] 2025-12-13 21:26:20,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:26:57] 2025-12-13 21:26:20,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:26:57] 2025-12-13 21:26:20,699 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:26:57] 2025-12-13 21:26:20,701 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:26:57] 2025-12-13 21:26:20,701 | INFO     | sum of square deviations: 85136480.0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,701 | INFO     | sum of deviations: 852698259.9999995
[2025-12-13 16:26:57] 2025-12-13 21:26:20,701 | INFO     | mean x: 1765659051.0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,702 | INFO     | mean y: 2708928.1692307694
[2025-12-13 16:26:57] 2025-12-13 21:26:20,702 | INFO     | intersect: -17681536421.661423
[2025-12-13 16:26:57] 2025-12-13 21:26:20,702 | INFO     | chi2: 0.0040246483179823805
[2025-12-13 16:26:57] 2025-12-13 21:26:20,702 | INFO     | current memory leak: 10.02 B/s (using 65 data points, chi2=0.00)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,703 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,703 | INFO     | ..............................
[2025-12-13 16:26:57] 2025-12-13 21:26:20,703 | INFO     | . Timing measurements:
[2025-12-13 16:26:57] 2025-12-13 21:26:20,703 | INFO     | . get job = 0 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,703 | INFO     | . initial setup = 2 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,704 | INFO     | . payload setup = 7 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,704 | INFO     | . stage-in = 0 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,704 | INFO     | . payload execution = 4378 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,704 | INFO     | . stage-out = 0 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,704 | INFO     | . log creation = 0 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,705 | INFO     | ..............................
[2025-12-13 16:26:57] 2025-12-13 21:26:20,787 | INFO     | 
[2025-12-13 16:26:57] 2025-12-13 21:26:20,787 | INFO     | job summary report
[2025-12-13 16:26:57] 2025-12-13 21:26:20,787 | INFO     | --------------------------------------------------
[2025-12-13 16:26:57] 2025-12-13 21:26:20,787 | INFO     | PanDA job id: 6929311538
[2025-12-13 16:26:57] 2025-12-13 21:26:20,787 | INFO     | task id: 47886831
[2025-12-13 16:26:57] 2025-12-13 21:26:20,788 | INFO     | errors: (none)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:26:57] 2025-12-13 21:26:20,788 | INFO     | pilot state: finished 
[2025-12-13 16:26:57] 2025-12-13 21:26:20,789 | INFO     | transexitcode: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,789 | INFO     | exeerrorcode: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,789 | INFO     | exeerrordiag: 
[2025-12-13 16:26:57] 2025-12-13 21:26:20,789 | INFO     | exitcode: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | exitmsg: OK
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | cpuconsumptiontime: 47266 s
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | nevents: 400
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | neventsw: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | pid: 7110
[2025-12-13 16:26:57] 2025-12-13 21:26:20,790 | INFO     | pgrp: 7110
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | corecount: 12
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | event service: False
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | sizes: {0: 2283763, 1: 2284018, 6: 2284280, 12: 2284308, 4389: 2310346, 4391: 2319344, 4393: 2319528, 4400: 2319722}
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | --------------------------------------------------
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | 
[2025-12-13 16:26:57] 2025-12-13 21:26:20,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 16:26:57] 2025-12-13 21:26:20,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:26:57] 2025-12-13 21:26:20,846 | INFO     | job 6929311538 has completed (purged errors)
[2025-12-13 16:26:57] 2025-12-13 21:26:20,846 | INFO     | overall cleanup function is called
[2025-12-13 16:26:57] 2025-12-13 21:26:20,918 | INFO     | PID=406 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-13 16:26:57] 2025-12-13 21:26:21,854 | INFO     | --- collectZombieJob: --- 10, [7110]
[2025-12-13 16:26:57] 2025-12-13 21:26:21,855 | INFO     | zombie collector waiting for pid 7110
[2025-12-13 16:26:57] 2025-12-13 21:26:21,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:26:57] 2025-12-13 21:26:21,855 | INFO     | collected zombie processes
[2025-12-13 16:26:57] 2025-12-13 21:26:21,855 | INFO     | will attempt to kill all subprocesses of pid=7110
[2025-12-13 16:26:57] 2025-12-13 21:26:21,946 | INFO     | process IDs to be killed: [7110] (in reverse order)
[2025-12-13 16:26:57] 2025-12-13 21:26:21,997 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:26:57] 2025-12-13 21:26:21,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:26:57] 2025-12-13 21:26:22,001 | INFO     | did not find any defunct processes belonging to 7110
[2025-12-13 16:26:57] 2025-12-13 21:26:22,003 | INFO     | did not find any defunct processes belonging to 7110
[2025-12-13 16:26:57] 2025-12-13 21:26:22,003 | INFO     | ready for new job
[2025-12-13 16:26:57] 2025-12-13 21:26:22,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:26:57] 2025-12-13 21:26:22,005 | INFO     | ***************************************
[2025-12-13 16:26:57] 2025-12-13 21:26:22,005 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:26:57] 2025-12-13 21:26:22,005 | INFO     | ***************************************
[2025-12-13 16:26:57] 2025-12-13 21:26:22,005 | INFO     | 
[2025-12-13 16:26:57] 2025-12-13 21:26:22,005 | INFO     | architecture information:
[2025-12-13 16:26:57] 2025-12-13 21:26:22,006 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:26:57] 2025-12-13 21:26:22,021 | INFO     | cat /etc/os-release:
[2025-12-13 16:26:57] NAME="CentOS Linux"
[2025-12-13 16:26:57] VERSION="7 (Core)"
[2025-12-13 16:26:57] ID="centos"
[2025-12-13 16:26:57] ID_LIKE="rhel fedora"
[2025-12-13 16:26:57] VERSION_ID="7"
[2025-12-13 16:26:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:26:57] ANSI_COLOR="0;31"
[2025-12-13 16:26:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:26:57] HOME_URL="https://www.centos.org/"
[2025-12-13 16:26:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:26:57] 
[2025-12-13 16:26:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:26:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:26:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:26:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:26:57] 
[2025-12-13 16:26:57] 2025-12-13 21:26:22,022 | INFO     | ***************************************
[2025-12-13 16:26:57] 2025-12-13 21:26:22,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 16:26:57] 2025-12-13 21:26:22,542 | INFO     | sufficient remaining disk space (29468131328 B)
[2025-12-13 16:26:57] 2025-12-13 21:26:22,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:26:57] 2025-12-13 21:26:22,543 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:26:57] 2025-12-13 21:26:22,543 | INFO     | update_server=False
[2025-12-13 16:26:57] 2025-12-13 21:26:22,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:26:57] 2025-12-13 21:26:22,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:26:57] 2025-12-13 21:26:22,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:26:57] 2025-12-13 21:26:22,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:26:57] 2025-12-13 21:26:22,545 | INFO     | aborting loop
[2025-12-13 16:26:57] 2025-12-13 21:26:22,560 | INFO     | all data control threads have been joined
[2025-12-13 16:26:57] 2025-12-13 21:26:22,777 | INFO     | all payload control threads have been joined
[2025-12-13 16:26:57] 2025-12-13 21:26:23,450 | INFO     | all job control threads have been joined
[2025-12-13 16:26:57] 2025-12-13 21:26:23,549 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:23,549 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:23,550 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:23,566 | INFO     | [data] control thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:23,783 | INFO     | [payload] control thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:23,999 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,076 | INFO     | [job] validate thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:26:57] 2025-12-13 21:26:24,400 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,455 | INFO     | [job] control thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,550 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,590 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,617 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,631 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:24,870 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:28,267 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:26:57] 2025-12-13 21:26:51,865 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:26:57] 2025-12-13 21:26:52,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880030959424)>', '<ExcThread(monitor, started 139879736391424)>']
[2025-12-13 16:26:57] 2025-12-13 21:26:53,106 | INFO     | PID=406 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-13 16:26:57] 2025-12-13 21:26:53,107 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:26:57] 2025-12-13 21:26:53,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:26:57] 2025-12-13 21:26:53,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:26:57] 2025-12-13 21:26:53,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:26:57] 2025-12-13 21:26:53,107 | INFO     | [monitor] control thread has ended
[2025-12-13 16:26:57] 2025-12-13 21:26:57,522 | INFO     | all workflow threads have been joined
[2025-12-13 16:26:57] 2025-12-13 21:26:57,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:26:57] 2025-12-13 21:26:57,522 | INFO     | traces error code: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:57,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:26:57] 2025-12-13 21:26:57,610 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:26:57] 2025-12-13 21:26:57,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:26:57] 2025-12-13 21:26:57,618 [wrapper] pilotpid: 406
[2025-12-13 16:26:57] 2025-12-13 21:26:57,622 [wrapper] Pilot exit status: 0
[2025-12-13 16:26:57] 2025-12-13 21:26:57,637 [wrapper] pandaids: 6929311538
[2025-12-13 16:26:57] 2025-12-13 21:26:57,678 [wrapper] cleanup supervisor_pilot 30002 407
[2025-12-13 16:26:57] 2025-12-13 21:26:57,682 [wrapper] Test setup, not cleaning
[2025-12-13 16:26:57] 2025-12-13 21:26:57,686 [wrapper] apfmon messages muted
[2025-12-13 16:26:57] 2025-12-13 21:26:57,690 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:26:57] 2025-12-13 21:26:57,694 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:26:57]  *** Error codes and diagnostics ***
[2025-12-13 16:26:57]     "exeErrorCode": 0,
[2025-12-13 16:26:57]     "exeErrorDiag": "",
[2025-12-13 16:26:57]     "pilotErrorCode": 0,
[2025-12-13 16:26:57]     "pilotErrorDiag": "",
[2025-12-13 16:26:57]  *** Listing of results directory ***
[2025-12-13 16:26:57] total 328952
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 16:26:57] -rwx------ 1 boincer umatlas     36322 Dec 13 08:46 runpilot2-wrapper.sh
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:47 queuedata.json
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:26:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:12 run_atlas
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:12 job.xml
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas 190115532 Dec 13 15:12 EVNT.47886829._000222.pool.root.1
[2025-12-13 16:26:57] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:12 shared
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 15:12 input.tar.gz
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:12 start_atlas.sh
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:12 boinc_lockfile
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 15:12 pandaJob.out
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas        57 Dec 13 15:12 setup.sh.local
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas    991736 Dec 13 15:12 agis_schedconf.cvmfs.json
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas   1516240 Dec 13 15:12 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:26:57] drwx------ 5 boincer umatlas      4096 Dec 13 15:12 pilot3
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 16:19 init_data.xml
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas 140769326 Dec 13 16:25 HITS.47886831._005549.pool.root.1
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas       529 Dec 13 16:26 boinc_task_state.xml
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas      1044 Dec 13 16:26 memory_monitor_summary.json
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas    384091 Dec 13 16:26 log.47886831._005549.job.log.tgz.1
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas      7843 Dec 13 16:26 heartbeat.json
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 16:26 boinc_mmap_file
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas        27 Dec 13 16:26 wrapper_checkpoint.txt
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas        95 Dec 13 16:26 pilot_heartbeat.json
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas      4744 Dec 13 16:26 pilotlog.txt
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas    640683 Dec 13 16:26 log.47886831._005549.job.log.1
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas       357 Dec 13 16:26 output.list
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas       620 Dec 13 16:26 runtime_log
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas   1044480 Dec 13 16:26 result.tar.gz
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas      9344 Dec 13 16:26 runtime_log.err
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas       659 Dec 13 16:26 oplNDmn7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfXPKDmtnkgnm.diag
[2025-12-13 16:26:57] -rw-r--r-- 1 boincer umatlas     22027 Dec 13 16:26 stderr.txt
[2025-12-13 16:26:57] HITS file was successfully produced:
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas 140769326 Dec 13 16:25 shared/HITS.pool.root.1
[2025-12-13 16:26:57]  *** Contents of shared directory: ***
[2025-12-13 16:26:57] total 324748
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas 190115532 Dec 13 15:12 ATLAS.root_0
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 15:12 input.tar.gz
[2025-12-13 16:26:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:12 start_atlas.sh
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas 140769326 Dec 13 16:25 HITS.pool.root.1
[2025-12-13 16:26:57] -rw------- 1 boincer umatlas   1044480 Dec 13 16:26 result.tar.gz
16:26:59 (29191): run_atlas exited; CPU time 47230.523699
16:26:59 (29191): called boinc_finish(0)

</stderr_txt>
]]>

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