Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:11:49 (12887): wrapper (7.7.26015): starting
15:11:49 (12887): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 15:11:49] Arguments: --nthreads 8
[2025-12-13 15:11:49] Threads: 8
[2025-12-13 15:11:49] Checking for CVMFS
[2025-12-13 15:11:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:11:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:11:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:11:50] 2.11.2.0 31887 31331 101004 153971 1 59 20126506 20275200 1 130560 0 8421903 99.871 2122565 36153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:11:50] CVMFS is ok
[2025-12-13 15:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:11:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:11:50] Further information can be found at the LHC@home message board.
[2025-12-13 15:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:11:50] Checking for apptainer binary...
[2025-12-13 15:11:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:11:50] Running /usr/bin/apptainer --version
[2025-12-13 15:11:50] apptainer version 1.3.2-1.el7
[2025-12-13 15:11:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:11:52] c-204-12.aglt2.org
[2025-12-13 15:11:52] apptainer works
[2025-12-13 15:11:52] Set ATHENA_PROC_NUMBER=8
[2025-12-13 15:11:52] Set ATHENA_CORE_NUMBER=8
[2025-12-13 15:11:52] Starting ATLAS job with PandaID=6929311420
[2025-12-13 15:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:30:36]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:30:36] 2025-12-13 22:29:56,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:30:36] 2025-12-13 22:29:56,532 | INFO     | time since job start (8266s) is within the limit (174528.0s)
[2025-12-13 17:30:36] 2025-12-13 22:29:58,538 | INFO     | time since job start (8268s) is within the limit (174528.0s)
[2025-12-13 17:30:36] 2025-12-13 22:29:58,816 | INFO     | monitor loop #609: job 0:6929311420 is in state 'finished'
[2025-12-13 17:30:36] 2025-12-13 22:29:58,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:30:36] 2025-12-13 22:30:00,542 | INFO     | time since job start (8270s) is within the limit (174528.0s)
[2025-12-13 17:30:36] 2025-12-13 22:30:01,318 | INFO     | monitor loop #610: job 0:6929311420 is in state 'finished'
[2025-12-13 17:30:36] 2025-12-13 22:30:01,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:30:36] 2025-12-13 22:30:02,548 | INFO     | time since job start (8272s) is within the limit (174528.0s)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,158 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 17:30:36] 2025-12-13 22:30:03,161 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-12-13 17:30:36] 2025-12-13 22:30:03,163 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929311420/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,164 | INFO     | extracted standard info from prmon json
[2025-12-13 17:30:36] 2025-12-13 22:30:03,165 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 17:30:36] 2025-12-13 22:30:03,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:30:36] 2025-12-13 22:30:03,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:30:36] 2025-12-13 22:30:03,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:30:36] 2025-12-13 22:30:03,168 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:30:36] 2025-12-13 22:30:03,169 | INFO     | sum of square deviations: 762879420.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,169 | INFO     | sum of deviations: -11104402912.000004
[2025-12-13 17:30:36] 2025-12-13 22:30:03,169 | INFO     | mean x: 1765660850.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,170 | INFO     | mean y: 2557820.762962963
[2025-12-13 17:30:36] 2025-12-13 22:30:03,170 | INFO     | intersect: 25703355312.907135
[2025-12-13 17:30:36] 2025-12-13 22:30:03,170 | INFO     | chi2: 1.7287186561170267
[2025-12-13 17:30:36] 2025-12-13 22:30:03,170 | INFO     | sum of square deviations: 681212772.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,171 | INFO     | sum of deviations: -9649529884.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,171 | INFO     | mean x: 1765660697.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,171 | INFO     | mean y: 2560538.7615384613
[2025-12-13 17:30:36] 2025-12-13 22:30:03,171 | INFO     | intersect: 25013535602.96347
[2025-12-13 17:30:36] 2025-12-13 22:30:03,172 | INFO     | chi2: 1.7297822987023475
[2025-12-13 17:30:36] 2025-12-13 22:30:03,172 | INFO     | current chi2=1.7297822987023475 (change=-0.061527801620992265 %)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,172 | INFO     | right removable region: 129
[2025-12-13 17:30:36] 2025-12-13 22:30:03,172 | INFO     | sum of square deviations: 681212772.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | sum of deviations: -32580706980.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | mean x: 1765661002.5
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | mean y: 2597260.392307692
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | intersect: 84449756902.2036
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | chi2: 0.13188943916345225
[2025-12-13 17:30:36] 2025-12-13 22:30:03,173 | INFO     | current chi2=0.13188943916345225 (change=92.37068225666654 %)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,174 | INFO     | sum of square deviations: 605592750.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,174 | INFO     | sum of deviations: -31496690590.000004
[2025-12-13 17:30:36] 2025-12-13 22:30:03,174 | INFO     | mean x: 1765661155.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | mean y: 2594993.72
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | intersect: 91834082550.0308
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | chi2: 0.11047886133647561
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | current chi2=0.11047886133647561 (change=16.23373180049863 %)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | left removable region: 20
[2025-12-13 17:30:36] 2025-12-13 22:30:03,175 | INFO     | sum of square deviations: 401533110.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,176 | INFO     | sum of deviations: -23476543936.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,176 | INFO     | mean x: 1765661277.0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,176 | INFO     | mean y: 2586378.633027523
[2025-12-13 17:30:36] 2025-12-13 22:30:03,176 | INFO     | intersect: 103235977382.38953
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | chi2: 0.10132312611559065
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | current memory leak: -58.47 B/s (using 109 data points, chi2=0.10)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | could have reported an average CPU frequency of 1976 MHz (8 samples)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | ..............................
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | . Timing measurements:
[2025-12-13 17:30:36] 2025-12-13 22:30:03,177 | INFO     | . get job = 0 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . initial setup = 2 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . payload setup = 8 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . stage-in = 0 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . payload execution = 8232 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . stage-out = 0 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | . log creation = 0 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,178 | INFO     | ..............................
[2025-12-13 17:30:36] 2025-12-13 22:30:03,632 | INFO     | 
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | job summary report
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | --------------------------------------------------
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | PanDA job id: 6929311420
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | task id: 47886831
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | errors: (none)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:30:36] 2025-12-13 22:30:03,634 | INFO     | pilot state: finished 
[2025-12-13 17:30:36] 2025-12-13 22:30:03,634 | INFO     | transexitcode: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,634 | INFO     | exeerrorcode: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,634 | INFO     | exeerrordiag: 
[2025-12-13 17:30:36] 2025-12-13 22:30:03,634 | INFO     | exitcode: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | exitmsg: OK
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | cpuconsumptiontime: 61053 s
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | nevents: 400
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | neventsw: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | pid: 23110
[2025-12-13 17:30:36] 2025-12-13 22:30:03,635 | INFO     | pgrp: 23110
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | corecount: 8
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | event service: False
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | sizes: {0: 2283990, 6: 2284252, 11: 2284280, 8244: 2312068, 8245: 2321066, 8248: 2321122, 8255: 2321444}
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | --------------------------------------------------
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | 
[2025-12-13 17:30:36] 2025-12-13 22:30:03,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:30:36] 2025-12-13 22:30:03,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,666 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:30:36] 2025-12-13 22:30:03,671 | INFO     | job 6929311420 has completed (purged errors)
[2025-12-13 17:30:36] 2025-12-13 22:30:03,671 | INFO     | overall cleanup function is called
[2025-12-13 17:30:36] 2025-12-13 22:30:04,680 | INFO     | --- collectZombieJob: --- 10, [23110]
[2025-12-13 17:30:36] 2025-12-13 22:30:04,680 | INFO     | zombie collector waiting for pid 23110
[2025-12-13 17:30:36] 2025-12-13 22:30:04,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:30:36] 2025-12-13 22:30:04,681 | INFO     | collected zombie processes
[2025-12-13 17:30:36] 2025-12-13 22:30:04,681 | INFO     | will attempt to kill all subprocesses of pid=23110
[2025-12-13 17:30:36] 2025-12-13 22:30:04,774 | INFO     | process IDs to be killed: [23110] (in reverse order)
[2025-12-13 17:30:36] 2025-12-13 22:30:04,832 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:30:36] 2025-12-13 22:30:04,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:30:36] 2025-12-13 22:30:04,838 | INFO     | did not find any defunct processes belonging to 23110
[2025-12-13 17:30:36] 2025-12-13 22:30:04,841 | INFO     | did not find any defunct processes belonging to 23110
[2025-12-13 17:30:36] 2025-12-13 22:30:04,842 | INFO     | ready for new job
[2025-12-13 17:30:36] 2025-12-13 22:30:04,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:30:36] 2025-12-13 22:30:04,844 | INFO     | ***************************************
[2025-12-13 17:30:36] 2025-12-13 22:30:04,844 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:30:36] 2025-12-13 22:30:04,844 | INFO     | ***************************************
[2025-12-13 17:30:36] 2025-12-13 22:30:04,844 | INFO     | 
[2025-12-13 17:30:36] 2025-12-13 22:30:04,845 | INFO     | architecture information:
[2025-12-13 17:30:36] 2025-12-13 22:30:04,846 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:30:36] 2025-12-13 22:30:04,863 | INFO     | cat /etc/os-release:
[2025-12-13 17:30:36] NAME="CentOS Linux"
[2025-12-13 17:30:36] VERSION="7 (Core)"
[2025-12-13 17:30:36] ID="centos"
[2025-12-13 17:30:36] ID_LIKE="rhel fedora"
[2025-12-13 17:30:36] VERSION_ID="7"
[2025-12-13 17:30:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:30:36] ANSI_COLOR="0;31"
[2025-12-13 17:30:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:30:36] HOME_URL="https://www.centos.org/"
[2025-12-13 17:30:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:30:36] 
[2025-12-13 17:30:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:30:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:30:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:30:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:30:36] 
[2025-12-13 17:30:36] 2025-12-13 22:30:04,863 | INFO     | ***************************************
[2025-12-13 17:30:36] 2025-12-13 22:30:05,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:30:36] 2025-12-13 22:30:05,388 | INFO     | sufficient remaining disk space (18679332864 B)
[2025-12-13 17:30:36] 2025-12-13 22:30:05,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:30:36] 2025-12-13 22:30:05,391 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:30:36] 2025-12-13 22:30:05,392 | INFO     | update_server=False
[2025-12-13 17:30:36] 2025-12-13 22:30:05,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:30:36] 2025-12-13 22:30:05,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:30:36] 2025-12-13 22:30:05,393 | INFO     | aborting loop
[2025-12-13 17:30:36] 2025-12-13 22:30:05,459 | INFO     | all data control threads have been joined
[2025-12-13 17:30:36] 2025-12-13 22:30:06,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:30:36] 2025-12-13 22:30:06,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:30:36] 2025-12-13 22:30:06,398 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:06,399 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:06,421 | INFO     | all payload control threads have been joined
[2025-12-13 17:30:36] 2025-12-13 22:30:06,465 | INFO     | [data] control thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:06,495 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:06,513 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:06,657 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:07,059 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:07,061 | INFO     | all job control threads have been joined
[2025-12-13 17:30:36] 2025-12-13 22:30:07,426 | INFO     | [payload] control thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:07,505 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:07,515 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:07,723 | INFO     | [job] validate thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:08,012 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:08,067 | INFO     | [job] control thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:08,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:30:36] 2025-12-13 22:30:09,283 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:10,376 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:16,401 | INFO     | job.realtimelogging is not enabled
[2025-12-13 17:30:36] 2025-12-13 22:30:17,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:30:36] 2025-12-13 22:30:23,410 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:30:36] 2025-12-13 22:30:24,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726185281344)>', '<ExcThread(monitor, started 139725000136448)>']
[2025-12-13 17:30:36] 2025-12-13 22:30:29,887 | INFO     | all workflow threads have been joined
[2025-12-13 17:30:36] 2025-12-13 22:30:29,887 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:30:36] 2025-12-13 22:30:29,888 | INFO     | traces error code: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:29,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:30:36] 2025-12-13 22:30:35,764 | INFO     | PID=16695 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 17:30:36] 2025-12-13 22:30:35,765 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:30:36] 2025-12-13 22:30:35,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:30:36] 2025-12-13 22:30:35,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:30:36] 2025-12-13 22:30:35,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:30:36] 2025-12-13 22:30:35,766 | INFO     | [monitor] control thread has ended
[2025-12-13 17:30:36] 2025-12-13 22:30:35,881 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:30:36] 2025-12-13 22:30:35,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:30:36] 2025-12-13 22:30:35,891 [wrapper] pilotpid: 16695
[2025-12-13 17:30:36] 2025-12-13 22:30:35,895 [wrapper] Pilot exit status: 0
[2025-12-13 17:30:36] 2025-12-13 22:30:35,912 [wrapper] pandaids: 6929311420
[2025-12-13 17:30:36] 2025-12-13 22:30:35,953 [wrapper] cleanup supervisor_pilot 19623 16696
[2025-12-13 17:30:36] 2025-12-13 22:30:35,958 [wrapper] Test setup, not cleaning
[2025-12-13 17:30:36] 2025-12-13 22:30:35,963 [wrapper] apfmon messages muted
[2025-12-13 17:30:36] 2025-12-13 22:30:35,967 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:30:36] 2025-12-13 22:30:35,971 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:30:36]  *** Error codes and diagnostics ***
[2025-12-13 17:30:36]     "exeErrorCode": 0,
[2025-12-13 17:30:36]     "exeErrorDiag": "",
[2025-12-13 17:30:36]     "pilotErrorCode": 0,
[2025-12-13 17:30:36]     "pilotErrorDiag": "",
[2025-12-13 17:30:36]  *** Listing of results directory ***
[2025-12-13 17:30:36] total 336272
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 17:30:36] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:30:36] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:11 run_atlas
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:11 job.xml
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas 191936390 Dec 13 15:11 EVNT.47886829._000217.pool.root.1
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:11 start_atlas.sh
[2025-12-13 17:30:36] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:11 shared
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas    592411 Dec 13 15:11 input.tar.gz
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:11 boinc_lockfile
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 15:11 pandaJob.out
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas        57 Dec 13 15:11 setup.sh.local
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas    991736 Dec 13 15:12 agis_schedconf.cvmfs.json
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas   1516240 Dec 13 15:12 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:30:36] drwx------ 5 boincer umatlas      4096 Dec 13 15:12 pilot3
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas 145394309 Dec 13 17:29 HITS.47886831._005431.pool.root.1
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas       529 Dec 13 17:29 boinc_task_state.xml
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas      1049 Dec 13 17:29 memory_monitor_summary.json
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas    390524 Dec 13 17:29 log.47886831._005431.job.log.tgz.1
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 17:29 init_data.xml
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas      7850 Dec 13 17:30 heartbeat.json
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:30 boinc_mmap_file
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas        27 Dec 13 17:30 wrapper_checkpoint.txt
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas        95 Dec 13 17:30 pilot_heartbeat.json
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas       745 Dec 13 17:30 pilotlog.txt
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas   1156980 Dec 13 17:30 log.47886831._005431.job.log.1
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas       357 Dec 13 17:30 output.list
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:30 runtime_log
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas   1566720 Dec 13 17:30 result.tar.gz
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas      9342 Dec 13 17:30 runtime_log.err
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas       661 Dec 13 17:30 NKVLDmk7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOeTKDmgz6jRo.diag
[2025-12-13 17:30:36] -rw-r--r-- 1 boincer umatlas     21265 Dec 13 17:30 stderr.txt
[2025-12-13 17:30:36] HITS file was successfully produced:
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas 145394309 Dec 13 17:29 shared/HITS.pool.root.1
[2025-12-13 17:30:36]  *** Contents of shared directory: ***
[2025-12-13 17:30:36] total 331560
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas 191936390 Dec 13 15:11 ATLAS.root_0
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:11 start_atlas.sh
[2025-12-13 17:30:36] -rw-r--r-- 2 boincer umatlas    592411 Dec 13 15:11 input.tar.gz
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas 145394309 Dec 13 17:29 HITS.pool.root.1
[2025-12-13 17:30:36] -rw------- 1 boincer umatlas   1566720 Dec 13 17:30 result.tar.gz
17:30:37 (12887): run_atlas exited; CPU time 61008.007317
17:30:37 (12887): called boinc_finish(0)

</stderr_txt>
]]>

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