Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:48 (2940115): wrapper (7.7.26015): starting
13:04:48 (2940115): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 13:04:48] Arguments: --nthreads 12
[2025-12-13 13:04:48] Threads: 12
[2025-12-13 13:04:48] Checking for CVMFS
[2025-12-13 13:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 13:04:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 13:04:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 13:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 13:04:53] 2.11.5.0 3857663 18203 265120 153972 3 231 41879959 45568000 13721 130560 0 57232831 99.745 45536978 20832 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 13:04:53] CVMFS is ok
[2025-12-13 13:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 13:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 13:04:53] Further information can be found at the LHC@home message board.
[2025-12-13 13:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 13:04:53] Checking for apptainer binary...
[2025-12-13 13:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 13:04:53] Running /usr/bin/apptainer --version
[2025-12-13 13:04:53] apptainer version 1.4.1-1.el9
[2025-12-13 13:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 13:04:55] wns0075.triumf.lcg
[2025-12-13 13:04:55] apptainer works
[2025-12-13 13:04:55] Set ATHENA_PROC_NUMBER=12
[2025-12-13 13:04:55] Set ATHENA_CORE_NUMBER=12
[2025-12-13 13:04:55] Starting ATLAS job with PandaID=6929311401
[2025-12-13 13:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 13:14:26]  *** The last 200 lines of the pilot log: ***
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | WARNING  | wrong length of table data, x=[1765660190.0, 1765660251.0], y=[1449.0, 468291.0] (must be same and length>=4)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | could have reported an average CPU frequency of 1256 MHz (4 samples)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . Timing measurements:
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . get job = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . initial setup = 7 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . payload setup = 59 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-in = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . payload execution = 116 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-out = 2 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . log creation = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929311401/pilotlog.txt
[2025-12-13 13:14:26] 2025-12-13 21:13:48,175 | INFO     | time since job start (450s) is within the limit (174528.0s)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,217 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 13:14:26] - Log from pilotlog.txt -
[2025-12-13 13:14:26] 2025-12-13 21:13:48,145 | INFO     | extracted standard info from prmon json
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | WARNING  | wrong length of table data, x=[1765660190.0, 1765660251.0], y=[1449.0, 468291.0] (must be same and length>=4)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | could have reported an average CPU frequency of 1256 MHz (4 samples)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . Timing measurements:
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . get job = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . initial setup = 7 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . payload setup = 59 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-in = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . payload execution = 116 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-out = 2 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . log creation = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929311401/pilotlog.txt
[2025-12-13 13:14:26] 2025-12-13 21:13:48,175 | INFO     | time since job start (450s) is within the limit (174528.0s)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,217 | WARNING  | 
[2025-12-13 13:14:26] [begin log extracts]
[2025-12-13 13:14:26] - Log from pilotlog.txt -
[2025-12-13 13:14:26] 2025-12-13 21:13:48,145 | INFO     | extracted standard info from prmon json
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 13:14:26] 2025-12-13 21:13:48,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | WARNING  | wrong length of table data, x=[1765660190.0, 1765660251.0], y=[1449.0, 468291.0] (must be same and length>=4)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | could have reported an average CPU frequency of 1256 MHz (4 samples)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,147 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . Timing measurements:
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . get job = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . initial setup = 7 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,148 | INFO     | . payload setup = 59 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-in = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . payload execution = 116 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . stage-out = 2 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,158 | INFO     | . log creation = 0 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | ..............................
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 13:14:26] 2025-12-13 21:13:48,159 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929311401/pilotlog.txt
[2025-12-13 13:14:26] 2025-12-13 21:13:48,175 | INFO     | time since job start (450s) is within the limit (174528.0s)
[2025-12-13 13:14:26] [end log extracts]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,217 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,219 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 13:14:26] 2025-12-13 21:13:48,515 | INFO     | 
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | job summary report
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | --------------------------------------------------
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | PanDA job id: 6929311401
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | task id: 47886831
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 13:10:47,429 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | pilot state: failed 
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | transexitcode: 65
[2025-12-13 13:14:26] 2025-12-13 21:13:48,516 | INFO     | exeerrorcode: 65
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | exitcode: 65
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | cpuconsumptiontime: 33 s
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | nevents: 0
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | neventsw: 0
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | pid: 2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | pgrp: 2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | corecount: 12
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | event service: False
[2025-12-13 13:14:26] 2025-12-13 21:13:48,517 | INFO     | sizes: {0: 2283758, 1: 2283814, 3: 2283870, 4: 2284041, 5: 2284069, 6: 2284125, 18: 2284281, 29: 2284309, 40: 2284337, 41: 2284627, 51: 2284655, 180: 2308238, 181:
[2025-12-13 13:14:26] 2025-12-13 21:13:48,518 | INFO     | --------------------------------------------------
[2025-12-13 13:14:26] 2025-12-13 21:13:48,518 | INFO     | 
[2025-12-13 13:14:26] 2025-12-13 21:13:48,518 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 13:14:26] 2025-12-13 21:13:48,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | job 6929311401 has completed (purged errors)
[2025-12-13 13:14:26] 2025-12-13 21:13:48,711 | INFO     | overall cleanup function is called
[2025-12-13 13:14:26] 2025-12-13 21:13:49,723 | INFO     | --- collectZombieJob: --- 10, [2951750]
[2025-12-13 13:14:26] 2025-12-13 21:13:49,723 | INFO     | zombie collector waiting for pid 2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:49,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 13:14:26] 2025-12-13 21:13:49,724 | INFO     | collected zombie processes
[2025-12-13 13:14:26] 2025-12-13 21:13:49,724 | INFO     | will attempt to kill all subprocesses of pid=2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:50,988 | INFO     | process IDs to be killed: [2951750] (in reverse order)
[2025-12-13 13:14:26] 2025-12-13 21:13:51,151 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 13:14:26] 2025-12-13 21:13:51,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 13:14:26] 2025-12-13 21:13:51,208 | INFO     | did not find any defunct processes belonging to 2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:51,298 | INFO     | did not find any defunct processes belonging to 2951750
[2025-12-13 13:14:26] 2025-12-13 21:13:51,298 | INFO     | ready for new job
[2025-12-13 13:14:26] 2025-12-13 21:13:51,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 13:14:26] 2025-12-13 21:13:51,300 | INFO     | ***************************************
[2025-12-13 13:14:26] 2025-12-13 21:13:51,301 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 13:14:26] 2025-12-13 21:13:51,301 | INFO     | ***************************************
[2025-12-13 13:14:26] 2025-12-13 21:13:51,301 | INFO     | 
[2025-12-13 13:14:26] 2025-12-13 21:13:51,309 | INFO     | architecture information:
[2025-12-13 13:14:26] 2025-12-13 21:13:51,336 | INFO     | executing command: cat /etc/os-release
[2025-12-13 13:14:26] 2025-12-13 21:13:51,372 | INFO     | cat /etc/os-release:
[2025-12-13 13:14:26] NAME="CentOS Linux"
[2025-12-13 13:14:26] VERSION="7 (Core)"
[2025-12-13 13:14:26] ID="centos"
[2025-12-13 13:14:26] ID_LIKE="rhel fedora"
[2025-12-13 13:14:26] VERSION_ID="7"
[2025-12-13 13:14:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 13:14:26] ANSI_COLOR="0;31"
[2025-12-13 13:14:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 13:14:26] HOME_URL="https://www.centos.org/"
[2025-12-13 13:14:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 13:14:26] 
[2025-12-13 13:14:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 13:14:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 13:14:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 13:14:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 13:14:26] 
[2025-12-13 13:14:26] 2025-12-13 21:13:51,373 | INFO     | ***************************************
[2025-12-13 13:14:26] 2025-12-13 21:13:51,876 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 13:14:26] 2025-12-13 21:13:51,944 | INFO     | sufficient remaining disk space (2102931750912 B)
[2025-12-13 13:14:26] 2025-12-13 21:13:51,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 13:14:26] 2025-12-13 21:13:51,945 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 13:14:26] 2025-12-13 21:13:51,945 | INFO     | update_server=False
[2025-12-13 13:14:26] 2025-12-13 21:13:51,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 13:14:26] 2025-12-13 21:13:51,953 | INFO     | all job control threads have been joined
[2025-12-13 13:14:26] 2025-12-13 21:13:52,004 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 13:14:26] 2025-12-13 21:13:52,004 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 13:14:26] 2025-12-13 21:13:52,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 13:14:26] 2025-12-13 21:13:52,005 | INFO     | will abort loop
[2025-12-13 13:14:26] 2025-12-13 21:13:52,256 | INFO     | all data control threads have been joined
[2025-12-13 13:14:26] 2025-12-13 21:13:52,763 | INFO     | all payload control threads have been joined
[2025-12-13 13:14:26] 2025-12-13 21:13:52,951 | INFO     | [job] retrieve thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:52,959 | INFO     | [job] control thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,010 | INFO     | [job] job monitor thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,011 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,262 | INFO     | [data] control thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 13:14:26] 2025-12-13 21:13:53,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 13:14:26] 2025-12-13 21:13:53,420 | INFO     | [data] copytool_in thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,530 | INFO     | [job] validate thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,531 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,532 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,769 | INFO     | [payload] control thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:53,773 | INFO     | [payload] validate_post thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:54,142 | INFO     | [payload] failed_post thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:54,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 13:14:26] 2025-12-13 21:13:54,426 | INFO     | [job] queue monitor thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:55,272 | INFO     | [data] copytool_out thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:13:58,425 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 13:14:26] 2025-12-13 21:14:17,563 | INFO     | [monitor] cgroup control has ended
[2025-12-13 13:14:26] 2025-12-13 21:14:18,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249257101120)>', '<ExcThread(monitor, started 140248583493376)>']
[2025-12-13 13:14:26] 2025-12-13 21:14:23,122 | INFO     | PID=2944420 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 13:14:26] 2025-12-13 21:14:23,123 | INFO     | .. there are 42 such processes running
[2025-12-13 13:14:26] 2025-12-13 21:14:23,124 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 13:14:26] 2025-12-13 21:14:23,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 13:14:26] 2025-12-13 21:14:23,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 13:14:26] 2025-12-13 21:14:23,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 13:14:26] 2025-12-13 21:14:23,125 | INFO     | [monitor] control thread has ended
[2025-12-13 13:14:26] 2025-12-13 21:14:23,166 | INFO     | all workflow threads have been joined
[2025-12-13 13:14:26] 2025-12-13 21:14:23,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 13:14:26] 2025-12-13 21:14:23,167 | INFO     | traces error code: 0
[2025-12-13 13:14:26] 2025-12-13 21:14:23,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 13:14:26] 2025-12-13 21:14:24,586 [wrapper] ==== pilot stdout END ====
[2025-12-13 13:14:26] 2025-12-13 21:14:24,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 13:14:26] 2025-12-13 21:14:24,631 [wrapper] pilotpid: 2944420
[2025-12-13 13:14:26] 2025-12-13 21:14:24,641 [wrapper] Pilot exit status: 0
[2025-12-13 13:14:26] 2025-12-13 21:14:24,758 [wrapper] pandaids: 6929311401
[2025-12-13 13:14:26] 2025-12-13 21:14:25,269 [wrapper] cleanup supervisor_pilot 2944426 2944421
[2025-12-13 13:14:26] 2025-12-13 21:14:25,309 [wrapper] Test setup, not cleaning
[2025-12-13 13:14:26] 2025-12-13 21:14:25,343 [wrapper] apfmon messages muted
[2025-12-13 13:14:26] 2025-12-13 21:14:25,387 [wrapper] ==== wrapper stdout END ====
[2025-12-13 13:14:26] 2025-12-13 21:14:25,422 [wrapper] ==== wrapper stderr END ====
[2025-12-13 13:14:26]  *** Error codes and diagnostics ***
[2025-12-13 13:14:26]     "exeErrorCode": 65,
[2025-12-13 13:14:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 13:14:26]     "pilotErrorCode": 1305,
[2025-12-13 13:14:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 13:14:26]  *** Listing of results directory ***
[2025-12-13 13:14:26] total 191524
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc    579449 Dec 13 05:45 pilot3.tar.gz
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc      5112 Dec 13 05:45 queuedata.json
[2025-12-13 13:14:26] -rwx------. 1 boinc boinc     36322 Dec 13 05:45 runpilot2-wrapper.sh
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc       100 Dec 13 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 13:14:26] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 13:04 run_atlas
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc       105 Dec 13 13:04 job.xml
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc 191936390 Dec 13 13:04 EVNT.47886829._000217.pool.root.1
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc      6595 Dec 13 13:04 init_data.xml
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc     15847 Dec 13 13:04 start_atlas.sh
[2025-12-13 13:14:26] drwxrwx--x. 2 boinc boinc      4096 Dec 13 13:04 shared
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc    592412 Dec 13 13:04 input.tar.gz
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc         0 Dec 13 13:04 boinc_lockfile
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc      2537 Dec 13 13:04 pandaJob.out
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc    991736 Dec 13 13:06 agis_schedconf.cvmfs.json
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc   1516240 Dec 13 13:06 agis_ddmendpoints.agis.ALL.json
[2025-12-13 13:14:26] drwx------. 5 boinc boinc      4096 Dec 13 13:06 pilot3
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc       525 Dec 13 13:10 boinc_task_state.xml
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc       991 Dec 13 13:10 memory_monitor_summary.json
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc     23372 Dec 13 13:11 log.47886831._005412.job.log.tgz.1
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc      8416 Dec 13 13:13 heartbeat.json
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc        95 Dec 13 13:14 pilot_heartbeat.json
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc      5009 Dec 13 13:14 pilotlog.txt
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc      8192 Dec 13 13:14 boinc_mmap_file
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc        23 Dec 13 13:14 wrapper_checkpoint.txt
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc    107869 Dec 13 13:14 log.47886831._005412.job.log.1
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc       188 Dec 13 13:14 output.list
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc       620 Dec 13 13:14 runtime_log
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc    153600 Dec 13 13:14 result.tar.gz
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc      8636 Dec 13 13:14 runtime_log.err
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc       644 Dec 13 13:14 9cGLDmk7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBeTKDmDF2Cwn.diag
[2025-12-13 13:14:26] -rw-r--r--. 1 boinc boinc     21887 Dec 13 13:14 stderr.txt
[2025-12-13 13:14:26] No HITS result produced
[2025-12-13 13:14:26]  *** Contents of shared directory: ***
[2025-12-13 13:14:26] total 188192
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc 191936390 Dec 13 13:04 ATLAS.root_0
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc     15847 Dec 13 13:04 start_atlas.sh
[2025-12-13 13:14:26] -rw-r--r--. 2 boinc boinc    592412 Dec 13 13:04 input.tar.gz
[2025-12-13 13:14:26] -rw-------. 1 boinc boinc    153600 Dec 13 13:14 result.tar.gz
13:14:27 (2940115): run_atlas exited; CPU time 54.959388
13:14:27 (2940115): called boinc_finish(0)

</stderr_txt>
]]>

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