Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:24 (27367): wrapper (7.7.26015): starting
15:01:24 (27367): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 15:01:24] Arguments: --nthreads 12
[2025-12-13 15:01:24] Threads: 12
[2025-12-13 15:01:24] Checking for CVMFS
[2025-12-13 15:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:01:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:01:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:01:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:01:25] 2.11.2.0 2945 312615 93324 153971 0 59 14203895 20275200 1 130560 2 137579954 99.963 18438276 15436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:01:25] CVMFS is ok
[2025-12-13 15:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:01:25] Further information can be found at the LHC@home message board.
[2025-12-13 15:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:01:25] Checking for apptainer binary...
[2025-12-13 15:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:01:25] Running /usr/bin/apptainer --version
[2025-12-13 15:01:25] apptainer version 1.3.2-1.el7
[2025-12-13 15:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:01:26] c-205-2.aglt2.org
[2025-12-13 15:01:26] apptainer works
[2025-12-13 15:01:26] Set ATHENA_PROC_NUMBER=12
[2025-12-13 15:01:26] Set ATHENA_CORE_NUMBER=12
[2025-12-13 15:01:26] Starting ATLAS job with PandaID=6929310448
[2025-12-13 15:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:17:55]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:17:55]  scope=mc23_13p6TeV
[2025-12-13 16:17:55]  status=None
[2025-12-13 16:17:55]  status_code=0
[2025-12-13 16:17:55]  storage_token=
[2025-12-13 16:17:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929310448/log.47886831._005189.job.log.tgz.1
[2025-12-13 16:17:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7a/log.47886831._005189.job.log.tgz.1
[2025-12-13 16:17:55]  workdir=None
[2025-12-13 16:17:55] ]
[2025-12-13 16:17:55] 2025-12-13 21:16:57,256 | INFO     | transferring file log.47886831._005189.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929310448/log.47886831._005189.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 16:17:55] 2025-12-13 21:16:57,256 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929310448/log.47886831._005189.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._005189.job
[2025-12-13 16:17:55] 2025-12-13 21:16:57,280 | INFO     | adding to output.list: log.47886831._005189.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7a/log.47886831._005189.job.log.tg
[2025-12-13 16:17:55] 2025-12-13 21:16:57,281 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 16:17:55] 2025-12-13 21:16:57,281 | INFO     | summary of transferred files:
[2025-12-13 16:17:55] 2025-12-13 21:16:57,281 | INFO     |  -- lfn=log.47886831._005189.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 16:17:55] 2025-12-13 21:16:57,281 | INFO     | stage-out finished correctly
[2025-12-13 16:17:55] 2025-12-13 21:16:58,543 | INFO     | time since job start (4515s) is within the limit (174528.0s)
[2025-12-13 16:17:55] 2025-12-13 21:16:59,558 | INFO     | monitor loop #338: job 0:6929310448 is in state 'finished'
[2025-12-13 16:17:55] 2025-12-13 21:16:59,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:17:55] 2025-12-13 21:16:59,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 16:17:55] 2025-12-13 21:17:00,548 | INFO     | time since job start (4517s) is within the limit (174528.0s)
[2025-12-13 16:17:55] 2025-12-13 21:17:01,604 | INFO     | job 6929310448 has state=finished
[2025-12-13 16:17:55] 2025-12-13 21:17:01,605 | INFO     | preparing for final server update for job 6929310448 in state='finished'
[2025-12-13 16:17:55] 2025-12-13 21:17:01,605 | INFO     | this job has now completed (state=finished)
[2025-12-13 16:17:55] 2025-12-13 21:17:01,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 16:17:55] 2025-12-13 21:17:01,606 | INFO     | log transfer has been attempted: DONE
[2025-12-13 16:17:55] 2025-12-13 21:17:01,606 | INFO     | job 6929310448 has finished - writing final server update
[2025-12-13 16:17:55] 2025-12-13 21:17:01,606 | INFO     | total number of processed events: 400 (read)
[2025-12-13 16:17:55] 2025-12-13 21:17:01,607 | INFO     | executing command: lscpu
[2025-12-13 16:17:55] 2025-12-13 21:17:01,629 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 16:17:55] 2025-12-13 21:17:02,061 | INFO     | monitor loop #339: job 0:6929310448 is in state 'finished'
[2025-12-13 16:17:55] 2025-12-13 21:17:02,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:17:55] 2025-12-13 21:17:02,554 | INFO     | time since job start (4519s) is within the limit (174528.0s)
[2025-12-13 16:17:55] 2025-12-13 21:17:04,560 | INFO     | time since job start (4521s) is within the limit (174528.0s)
[2025-12-13 16:17:55] 2025-12-13 21:17:04,571 | INFO     | monitor loop #340: job 0:6929310448 is in state 'finished'
[2025-12-13 16:17:55] 2025-12-13 21:17:04,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:17:55] 2025-12-13 21:17:06,566 | INFO     | time since job start (4523s) is within the limit (174528.0s)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,074 | INFO     | monitor loop #341: job 0:6929310448 is in state 'finished'
[2025-12-13 16:17:55] 2025-12-13 21:17:07,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,659 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 16:17:55] 2025-12-13 21:17:07,663 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-12-13 16:17:55] 2025-12-13 21:17:07,665 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310448/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,666 | INFO     | extracted standard info from prmon json
[2025-12-13 16:17:55] 2025-12-13 21:17:07,667 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:17:55] 2025-12-13 21:17:07,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:17:55] 2025-12-13 21:17:07,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:17:55] 2025-12-13 21:17:07,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:17:55] 2025-12-13 21:17:07,670 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:17:55] 2025-12-13 21:17:07,670 | INFO     | sum of square deviations: 93240818.0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,670 | INFO     | sum of deviations: -1804357063.9999998
[2025-12-13 16:17:55] 2025-12-13 21:17:07,670 | INFO     | mean x: 1765658450.0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,670 | INFO     | mean y: 2666387.686567164
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | intersect: 34170945529.862156
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | chi2: 0.050492439182581846
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | current memory leak: -19.35 B/s (using 67 data points, chi2=0.05)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | ..............................
[2025-12-13 16:17:55] 2025-12-13 21:17:07,671 | INFO     | . Timing measurements:
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . get job = 0 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . initial setup = 2 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . payload setup = 7 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . stage-in = 0 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . payload execution = 4486 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . stage-out = 0 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | . log creation = 0 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,672 | INFO     | ..............................
[2025-12-13 16:17:55] 2025-12-13 21:17:07,905 | INFO     | 
[2025-12-13 16:17:55] 2025-12-13 21:17:07,906 | INFO     | job summary report
[2025-12-13 16:17:55] 2025-12-13 21:17:07,906 | INFO     | --------------------------------------------------
[2025-12-13 16:17:55] 2025-12-13 21:17:07,906 | INFO     | PanDA job id: 6929310448
[2025-12-13 16:17:55] 2025-12-13 21:17:07,906 | INFO     | task id: 47886831
[2025-12-13 16:17:55] 2025-12-13 21:17:07,906 | INFO     | errors: (none)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | pilot state: finished 
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | transexitcode: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | exeerrorcode: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | exeerrordiag: 
[2025-12-13 16:17:55] 2025-12-13 21:17:07,907 | INFO     | exitcode: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | exitmsg: OK
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | cpuconsumptiontime: 48793 s
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | nevents: 400
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | neventsw: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | pid: 5554
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | pgrp: 5554
[2025-12-13 16:17:55] 2025-12-13 21:17:07,908 | INFO     | corecount: 12
[2025-12-13 16:17:55] 2025-12-13 21:17:07,909 | INFO     | event service: False
[2025-12-13 16:17:55] 2025-12-13 21:17:07,909 | INFO     | sizes: {0: 2283990, 5: 2284252, 11: 2284308, 4496: 2310429, 4497: 2319427, 4500: 2319483, 4508: 2319805}
[2025-12-13 16:17:55] 2025-12-13 21:17:07,909 | INFO     | --------------------------------------------------
[2025-12-13 16:17:55] 2025-12-13 21:17:07,909 | INFO     | 
[2025-12-13 16:17:55] 2025-12-13 21:17:07,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 16:17:55] 2025-12-13 21:17:07,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:17:55] 2025-12-13 21:17:07,936 | INFO     | job 6929310448 has completed (purged errors)
[2025-12-13 16:17:55] 2025-12-13 21:17:07,937 | INFO     | overall cleanup function is called
[2025-12-13 16:17:55] 2025-12-13 21:17:08,945 | INFO     | --- collectZombieJob: --- 10, [5554]
[2025-12-13 16:17:55] 2025-12-13 21:17:08,945 | INFO     | zombie collector waiting for pid 5554
[2025-12-13 16:17:55] 2025-12-13 21:17:08,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:17:55] 2025-12-13 21:17:08,945 | INFO     | collected zombie processes
[2025-12-13 16:17:55] 2025-12-13 21:17:08,946 | INFO     | will attempt to kill all subprocesses of pid=5554
[2025-12-13 16:17:55] 2025-12-13 21:17:09,034 | INFO     | process IDs to be killed: [5554] (in reverse order)
[2025-12-13 16:17:55] 2025-12-13 21:17:09,086 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:17:55] 2025-12-13 21:17:09,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:17:55] 2025-12-13 21:17:09,090 | INFO     | did not find any defunct processes belonging to 5554
[2025-12-13 16:17:55] 2025-12-13 21:17:09,092 | INFO     | did not find any defunct processes belonging to 5554
[2025-12-13 16:17:55] 2025-12-13 21:17:09,092 | INFO     | ready for new job
[2025-12-13 16:17:55] 2025-12-13 21:17:09,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:17:55] 2025-12-13 21:17:09,093 | INFO     | ***************************************
[2025-12-13 16:17:55] 2025-12-13 21:17:09,093 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:17:55] 2025-12-13 21:17:09,094 | INFO     | ***************************************
[2025-12-13 16:17:55] 2025-12-13 21:17:09,094 | INFO     | 
[2025-12-13 16:17:55] 2025-12-13 21:17:09,094 | INFO     | architecture information:
[2025-12-13 16:17:55] 2025-12-13 21:17:09,095 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:17:55] 2025-12-13 21:17:09,110 | INFO     | cat /etc/os-release:
[2025-12-13 16:17:55] NAME="CentOS Linux"
[2025-12-13 16:17:55] VERSION="7 (Core)"
[2025-12-13 16:17:55] ID="centos"
[2025-12-13 16:17:55] ID_LIKE="rhel fedora"
[2025-12-13 16:17:55] VERSION_ID="7"
[2025-12-13 16:17:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:17:55] ANSI_COLOR="0;31"
[2025-12-13 16:17:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:17:55] HOME_URL="https://www.centos.org/"
[2025-12-13 16:17:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:17:55] 
[2025-12-13 16:17:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:17:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:17:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:17:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:17:55] 
[2025-12-13 16:17:55] 2025-12-13 21:17:09,110 | INFO     | ***************************************
[2025-12-13 16:17:55] 2025-12-13 21:17:09,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 16:17:55] 2025-12-13 21:17:09,630 | INFO     | sufficient remaining disk space (29523705856 B)
[2025-12-13 16:17:55] 2025-12-13 21:17:09,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:17:55] 2025-12-13 21:17:09,630 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:17:55] 2025-12-13 21:17:09,631 | INFO     | update_server=False
[2025-12-13 16:17:55] 2025-12-13 21:17:09,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:17:55] 2025-12-13 21:17:09,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:17:55] 2025-12-13 21:17:09,878 | INFO     | all job control threads have been joined
[2025-12-13 16:17:55] 2025-12-13 21:17:10,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:17:55] 2025-12-13 21:17:10,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:17:55] 2025-12-13 21:17:10,549 | INFO     | all payload control threads have been joined
[2025-12-13 16:17:55] 2025-12-13 21:17:10,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:17:55] 2025-12-13 21:17:10,587 | INFO     | aborting loop
[2025-12-13 16:17:55] 2025-12-13 21:17:10,636 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:10,637 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:10,662 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:10,671 | INFO     | all data control threads have been joined
[2025-12-13 16:17:55] 2025-12-13 21:17:10,883 | INFO     | [job] control thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:10,990 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,516 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,555 | INFO     | [payload] control thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,592 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,614 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,676 | INFO     | [data] control thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:11,867 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:12,037 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:12,115 | INFO     | [job] validate thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:12,385 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:14,491 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:20,496 | INFO     | job.realtimelogging is not enabled
[2025-12-13 16:17:55] 2025-12-13 21:17:21,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:17:55] 2025-12-13 21:17:39,766 | INFO     | PID=31407 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:17:55] 2025-12-13 21:17:39,766 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:17:55] 2025-12-13 21:17:39,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:17:55] 2025-12-13 21:17:39,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:17:55] 2025-12-13 21:17:50,129 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:17:55] 2025-12-13 21:17:50,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883633325888)>', '<ExcThread(monitor, started 139883007940352)>']
[2025-12-13 16:17:55] 2025-12-13 21:17:50,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:17:55] 2025-12-13 21:17:50,819 | INFO     | [monitor] control thread has ended
[2025-12-13 16:17:55] 2025-12-13 21:17:55,464 | INFO     | all workflow threads have been joined
[2025-12-13 16:17:55] 2025-12-13 21:17:55,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:17:55] 2025-12-13 21:17:55,465 | INFO     | traces error code: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:55,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:17:55] 2025-12-13 21:17:55,552 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:17:55] 2025-12-13 21:17:55,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:17:55] 2025-12-13 21:17:55,560 [wrapper] pilotpid: 31407
[2025-12-13 16:17:55] 2025-12-13 21:17:55,564 [wrapper] Pilot exit status: 0
[2025-12-13 16:17:55] 2025-12-13 21:17:55,580 [wrapper] pandaids: 6929310448
[2025-12-13 16:17:55] 2025-12-13 21:17:55,627 [wrapper] cleanup supervisor_pilot   971 31408
[2025-12-13 16:17:55] 2025-12-13 21:17:55,631 [wrapper] Test setup, not cleaning
[2025-12-13 16:17:55] 2025-12-13 21:17:55,635 [wrapper] apfmon messages muted
[2025-12-13 16:17:55] 2025-12-13 21:17:55,639 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:17:55] 2025-12-13 21:17:55,643 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:17:55]  *** Error codes and diagnostics ***
[2025-12-13 16:17:55]     "exeErrorCode": 0,
[2025-12-13 16:17:55]     "exeErrorDiag": "",
[2025-12-13 16:17:55]     "pilotErrorCode": 0,
[2025-12-13 16:17:55]     "pilotErrorDiag": "",
[2025-12-13 16:17:55]  *** Listing of results directory ***
[2025-12-13 16:17:55] total 333748
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 16:17:55] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:17:55] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:01 run_atlas
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:01 job.xml
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas 194539188 Dec 13 15:01 EVNT.47886829._000208.pool.root.1
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:01 start_atlas.sh
[2025-12-13 16:17:55] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:01 shared
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas    592407 Dec 13 15:01 input.tar.gz
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:01 boinc_lockfile
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 15:01 pandaJob.out
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas        57 Dec 13 15:01 setup.sh.local
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas    991736 Dec 13 15:01 agis_schedconf.cvmfs.json
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas   1516240 Dec 13 15:01 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:17:55] drwx------ 5 boincer umatlas      4096 Dec 13 15:01 pilot3
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas      5951 Dec 13 16:10 init_data.xml
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas 141236232 Dec 13 16:16 HITS.47886831._005189.pool.root.1
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas       529 Dec 13 16:16 boinc_task_state.xml
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas        95 Dec 13 16:16 pilot_heartbeat.json
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas      1045 Dec 13 16:16 memory_monitor_summary.json
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas    375315 Dec 13 16:16 log.47886831._005189.job.log.tgz.1
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas      7843 Dec 13 16:17 heartbeat.json
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 16:17 boinc_mmap_file
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas        27 Dec 13 16:17 wrapper_checkpoint.txt
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas      4818 Dec 13 16:17 pilotlog.txt
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas    656278 Dec 13 16:17 log.47886831._005189.job.log.1
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas       357 Dec 13 16:17 output.list
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas       620 Dec 13 16:17 runtime_log
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas   1054720 Dec 13 16:17 result.tar.gz
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas       658 Dec 13 16:17 yxOODmd7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKVPKDmyWufln.diag
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 16:17 runtime_log.err
[2025-12-13 16:17:55] -rw-r--r-- 1 boincer umatlas     21959 Dec 13 16:17 stderr.txt
[2025-12-13 16:17:55] HITS file was successfully produced:
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas 141236232 Dec 13 16:16 shared/HITS.pool.root.1
[2025-12-13 16:17:55]  *** Contents of shared directory: ***
[2025-12-13 16:17:55] total 329536
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas 194539188 Dec 13 15:01 ATLAS.root_0
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:01 start_atlas.sh
[2025-12-13 16:17:55] -rw-r--r-- 2 boincer umatlas    592407 Dec 13 15:01 input.tar.gz
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas 141236232 Dec 13 16:16 HITS.pool.root.1
[2025-12-13 16:17:55] -rw------- 1 boincer umatlas   1054720 Dec 13 16:17 result.tar.gz
16:17:57 (27367): run_atlas exited; CPU time 48780.659709
16:17:57 (27367): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN