Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:57:12 (2811): wrapper (7.7.26015): starting
14:57:12 (2811): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 14:57:12] Arguments: --nthreads 8
[2025-12-13 14:57:12] Threads: 8
[2025-12-13 14:57:12] Checking for CVMFS
[2025-12-13 14:57:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:57:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:57:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:57:12] 2.11.2.0 2797 90643 77416 153971 1 59 17290753 20275201 1 130560 0 22959253 99.851 5212595 31799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 14:57:12] CVMFS is ok
[2025-12-13 14:57:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:57:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:57:12] Further information can be found at the LHC@home message board.
[2025-12-13 14:57:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:57:12] Checking for apptainer binary...
[2025-12-13 14:57:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:57:12] Running /usr/bin/apptainer --version
[2025-12-13 14:57:12] apptainer version 1.3.2-1.el7
[2025-12-13 14:57:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:57:14] c-204-11.aglt2.org
[2025-12-13 14:57:14] apptainer works
[2025-12-13 14:57:14] Set ATHENA_PROC_NUMBER=8
[2025-12-13 14:57:14] Set ATHENA_CORE_NUMBER=8
[2025-12-13 14:57:14] Starting ATLAS job with PandaID=6929310435
[2025-12-13 14:57:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:14:50]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:14:50] 2025-12-13 22:13:53,718 | INFO     | maximum number of monitored processes: 6
[2025-12-13 17:14:50] 2025-12-13 22:13:55,274 | INFO     | time since job start (8185s) is within the limit (174528.0s)
[2025-12-13 17:14:50] 2025-12-13 22:13:56,220 | INFO     | monitor loop #601: job 0:6929310435 is in state 'finished'
[2025-12-13 17:14:50] 2025-12-13 22:13:56,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:14:50] 2025-12-13 22:13:57,280 | INFO     | time since job start (8187s) is within the limit (174528.0s)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,724 | INFO     | monitor loop #602: job 0:6929310435 is in state 'finished'
[2025-12-13 17:14:50] 2025-12-13 22:13:58,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,960 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 17:14:50] 2025-12-13 22:13:58,963 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-12-13 17:14:50] 2025-12-13 22:13:58,964 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310435/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,965 | INFO     | extracted standard info from prmon json
[2025-12-13 17:14:50] 2025-12-13 22:13:58,965 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 17:14:50] 2025-12-13 22:13:58,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:14:50] 2025-12-13 22:13:58,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:14:50] 2025-12-13 22:13:58,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:14:50] 2025-12-13 22:13:58,969 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:14:50] 2025-12-13 22:13:58,969 | INFO     | sum of square deviations: 746051197.5
[2025-12-13 17:14:50] 2025-12-13 22:13:58,970 | INFO     | sum of deviations: 15364516794.500002
[2025-12-13 17:14:50] 2025-12-13 22:13:58,970 | INFO     | mean x: 1765659937.5
[2025-12-13 17:14:50] 2025-12-13 22:13:58,970 | INFO     | mean y: 2464475.723880597
[2025-12-13 17:14:50] 2025-12-13 22:13:58,970 | INFO     | intersect: -36360337238.15525
[2025-12-13 17:14:50] 2025-12-13 22:13:58,970 | INFO     | chi2: 1.5213599943574598
[2025-12-13 17:14:50] 2025-12-13 22:13:58,971 | INFO     | sum of square deviations: 665612480.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,971 | INFO     | sum of deviations: 14508789975.999994
[2025-12-13 17:14:50] 2025-12-13 22:13:58,971 | INFO     | mean x: 1765659785.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,972 | INFO     | mean y: 2462854.2868217053
[2025-12-13 17:14:50] 2025-12-13 22:13:58,972 | INFO     | intersect: -38484776732.37824
[2025-12-13 17:14:50] 2025-12-13 22:13:58,972 | INFO     | chi2: 1.5235584246350584
[2025-12-13 17:14:50] 2025-12-13 22:13:58,972 | INFO     | current chi2=1.5235584246350584 (change=-0.14450427812958774 %)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,972 | INFO     | right removable region: 128
[2025-12-13 17:14:50] 2025-12-13 22:13:58,973 | INFO     | sum of square deviations: 665612480.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,973 | INFO     | sum of deviations: -3872906043.0000005
[2025-12-13 17:14:50] 2025-12-13 22:13:58,973 | INFO     | mean x: 1765660090.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,973 | INFO     | mean y: 2500277.7751937984
[2025-12-13 17:14:50] 2025-12-13 22:13:58,974 | INFO     | intersect: 10276099162.887632
[2025-12-13 17:14:50] 2025-12-13 22:13:58,974 | INFO     | chi2: 0.08691292425429811
[2025-12-13 17:14:50] 2025-12-13 22:13:58,974 | INFO     | current chi2=0.08691292425429811 (change=94.28715592781145 %)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,974 | INFO     | sum of square deviations: 591173875.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,975 | INFO     | sum of deviations: -3283390361.499999
[2025-12-13 17:14:50] 2025-12-13 22:13:58,975 | INFO     | mean x: 1765660242.5
[2025-12-13 17:14:50] 2025-12-13 22:13:58,975 | INFO     | mean y: 2498959.8467741935
[2025-12-13 17:14:50] 2025-12-13 22:13:58,975 | INFO     | intersect: 9809007784.189278
[2025-12-13 17:14:50] 2025-12-13 22:13:58,975 | INFO     | chi2: 0.07111045053743503
[2025-12-13 17:14:50] 2025-12-13 22:13:58,976 | INFO     | current chi2=0.07111045053743503 (change=18.18196068357647 %)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,976 | INFO     | left removable region: 20
[2025-12-13 17:14:50] 2025-12-13 22:13:58,976 | INFO     | sum of square deviations: 390582207.0
[2025-12-13 17:14:50] 2025-12-13 22:13:58,976 | INFO     | sum of deviations: 2406325468.5
[2025-12-13 17:14:50] 2025-12-13 22:13:58,977 | INFO     | mean x: 1765660364.5
[2025-12-13 17:14:50] 2025-12-13 22:13:58,977 | INFO     | mean y: 2484077.824074074
[2025-12-13 17:14:50] 2025-12-13 22:13:58,977 | INFO     | intersect: -10875516577.790388
[2025-12-13 17:14:50] 2025-12-13 22:13:58,977 | INFO     | chi2: 0.0007441802752327631
[2025-12-13 17:14:50] 2025-12-13 22:13:58,977 | INFO     | current memory leak: 6.16 B/s (using 108 data points, chi2=0.00)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | ..............................
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . Timing measurements:
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . get job = 0 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . initial setup = 2 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . payload setup = 8 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . stage-in = 0 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . payload execution = 8150 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,978 | INFO     | . stage-out = 0 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,979 | INFO     | . log creation = 0 s
[2025-12-13 17:14:50] 2025-12-13 22:13:58,979 | INFO     | ..............................
[2025-12-13 17:14:50] 2025-12-13 22:13:59,067 | INFO     | 
[2025-12-13 17:14:50] 2025-12-13 22:13:59,067 | INFO     | job summary report
[2025-12-13 17:14:50] 2025-12-13 22:13:59,067 | INFO     | --------------------------------------------------
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | PanDA job id: 6929310435
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | task id: 47886831
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | errors: (none)
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | pilot state: finished 
[2025-12-13 17:14:50] 2025-12-13 22:13:59,068 | INFO     | transexitcode: 0
[2025-12-13 17:14:50] 2025-12-13 22:13:59,069 | INFO     | exeerrorcode: 0
[2025-12-13 17:14:50] 2025-12-13 22:13:59,069 | INFO     | exeerrordiag: 
[2025-12-13 17:14:50] 2025-12-13 22:13:59,069 | INFO     | exitcode: 0
[2025-12-13 17:14:50] 2025-12-13 22:13:59,069 | INFO     | exitmsg: OK
[2025-12-13 17:14:50] 2025-12-13 22:13:59,069 | INFO     | cpuconsumptiontime: 59627 s
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | nevents: 400
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | neventsw: 0
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | pid: 12915
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | pgrp: 12915
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | corecount: 8
[2025-12-13 17:14:50] 2025-12-13 22:13:59,070 | INFO     | event service: False
[2025-12-13 17:14:50] 2025-12-13 22:13:59,071 | INFO     | sizes: {0: 2283819, 1: 2284018, 6: 2284280, 11: 2284308, 8162: 2312068, 8163: 2321250, 8171: 2321388}
[2025-12-13 17:14:50] 2025-12-13 22:13:59,071 | INFO     | --------------------------------------------------
[2025-12-13 17:14:50] 2025-12-13 22:13:59,071 | INFO     | 
[2025-12-13 17:14:50] 2025-12-13 22:13:59,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:14:50] 2025-12-13 22:13:59,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:14:50] 2025-12-13 22:13:59,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:14:50] 2025-12-13 22:13:59,100 | INFO     | job 6929310435 has completed (purged errors)
[2025-12-13 17:14:50] 2025-12-13 22:13:59,101 | INFO     | overall cleanup function is called
[2025-12-13 17:14:50] 2025-12-13 22:14:00,109 | INFO     | --- collectZombieJob: --- 10, [12915]
[2025-12-13 17:14:50] 2025-12-13 22:14:00,109 | INFO     | zombie collector waiting for pid 12915
[2025-12-13 17:14:50] 2025-12-13 22:14:00,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:14:50] 2025-12-13 22:14:00,109 | INFO     | collected zombie processes
[2025-12-13 17:14:50] 2025-12-13 22:14:00,110 | INFO     | will attempt to kill all subprocesses of pid=12915
[2025-12-13 17:14:50] 2025-12-13 22:14:00,197 | INFO     | process IDs to be killed: [12915] (in reverse order)
[2025-12-13 17:14:50] 2025-12-13 22:14:00,252 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:14:50] 2025-12-13 22:14:00,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:14:50] 2025-12-13 22:14:00,257 | INFO     | did not find any defunct processes belonging to 12915
[2025-12-13 17:14:50] 2025-12-13 22:14:00,260 | INFO     | did not find any defunct processes belonging to 12915
[2025-12-13 17:14:50] 2025-12-13 22:14:00,261 | INFO     | ready for new job
[2025-12-13 17:14:50] 2025-12-13 22:14:00,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:14:50] 2025-12-13 22:14:00,263 | INFO     | ***************************************
[2025-12-13 17:14:50] 2025-12-13 22:14:00,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:14:50] 2025-12-13 22:14:00,263 | INFO     | ***************************************
[2025-12-13 17:14:50] 2025-12-13 22:14:00,263 | INFO     | 
[2025-12-13 17:14:50] 2025-12-13 22:14:00,264 | INFO     | architecture information:
[2025-12-13 17:14:50] 2025-12-13 22:14:00,264 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:14:50] 2025-12-13 22:14:00,281 | INFO     | cat /etc/os-release:
[2025-12-13 17:14:50] NAME="CentOS Linux"
[2025-12-13 17:14:50] VERSION="7 (Core)"
[2025-12-13 17:14:50] ID="centos"
[2025-12-13 17:14:50] ID_LIKE="rhel fedora"
[2025-12-13 17:14:50] VERSION_ID="7"
[2025-12-13 17:14:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:14:50] ANSI_COLOR="0;31"
[2025-12-13 17:14:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:14:50] HOME_URL="https://www.centos.org/"
[2025-12-13 17:14:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:14:50] 
[2025-12-13 17:14:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:14:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:14:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:14:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:14:50] 
[2025-12-13 17:14:50] 2025-12-13 22:14:00,282 | INFO     | ***************************************
[2025-12-13 17:14:50] 2025-12-13 22:14:00,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:14:50] 2025-12-13 22:14:00,802 | INFO     | sufficient remaining disk space (18684575744 B)
[2025-12-13 17:14:50] 2025-12-13 22:14:00,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:14:50] 2025-12-13 22:14:00,803 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:14:50] 2025-12-13 22:14:00,803 | INFO     | update_server=False
[2025-12-13 17:14:50] 2025-12-13 22:14:00,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:14:50] 2025-12-13 22:14:00,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:14:50] 2025-12-13 22:14:01,228 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 17:14:50] 2025-12-13 22:14:01,228 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 17:14:50] 2025-12-13 22:14:01,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:14:50] 2025-12-13 22:14:01,228 | INFO     | will abort loop
[2025-12-13 17:14:50] 2025-12-13 22:14:01,416 | INFO     | all data control threads have been joined
[2025-12-13 17:14:50] 2025-12-13 22:14:01,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:14:50] 2025-12-13 22:14:01,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:14:50] 2025-12-13 22:14:01,805 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:01,809 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,000 | INFO     | all job control threads have been joined
[2025-12-13 17:14:50] 2025-12-13 22:14:02,018 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,107 | INFO     | all payload control threads have been joined
[2025-12-13 17:14:50] 2025-12-13 22:14:02,137 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,234 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,259 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,397 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,421 | INFO     | [data] control thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:02,766 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:03,005 | INFO     | [job] control thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:03,068 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:03,095 | INFO     | [job] validate thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:03,113 | INFO     | [payload] control thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:03,457 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:05,534 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:10,865 | INFO     | job.realtimelogging is not enabled
[2025-12-13 17:14:50] 2025-12-13 22:14:11,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:14:50] 2025-12-13 22:14:30,490 | INFO     | PID=6548 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 17:14:50] 2025-12-13 22:14:30,492 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:14:50] 2025-12-13 22:14:30,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:14:50] 2025-12-13 22:14:30,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:14:50] 2025-12-13 22:14:43,439 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:14:50] 2025-12-13 22:14:44,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569207748416)>', '<ExcThread(monitor, started 140568030078720)>']
[2025-12-13 17:14:50] 2025-12-13 22:14:45,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:14:50] 2025-12-13 22:14:45,570 | INFO     | [monitor] control thread has ended
[2025-12-13 17:14:50] 2025-12-13 22:14:49,888 | INFO     | all workflow threads have been joined
[2025-12-13 17:14:50] 2025-12-13 22:14:49,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:14:50] 2025-12-13 22:14:49,890 | INFO     | traces error code: 0
[2025-12-13 17:14:50] 2025-12-13 22:14:49,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:14:50] 2025-12-13 22:14:50,104 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:14:50] 2025-12-13 22:14:50,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:14:50] 2025-12-13 22:14:50,113 [wrapper] pilotpid: 6548
[2025-12-13 17:14:50] 2025-12-13 22:14:50,118 [wrapper] Pilot exit status: 0
[2025-12-13 17:14:50] 2025-12-13 22:14:50,136 [wrapper] pandaids: 6929310435
[2025-12-13 17:14:50] 2025-12-13 22:14:50,191 [wrapper] cleanup supervisor_pilot 13106 6549
[2025-12-13 17:14:50] 2025-12-13 22:14:50,195 [wrapper] Test setup, not cleaning
[2025-12-13 17:14:50] 2025-12-13 22:14:50,200 [wrapper] apfmon messages muted
[2025-12-13 17:14:50] 2025-12-13 22:14:50,204 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:14:50] 2025-12-13 22:14:50,209 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:14:50]  *** Error codes and diagnostics ***
[2025-12-13 17:14:50]     "exeErrorCode": 0,
[2025-12-13 17:14:50]     "exeErrorDiag": "",
[2025-12-13 17:14:50]     "pilotErrorCode": 0,
[2025-12-13 17:14:50]     "pilotErrorDiag": "",
[2025-12-13 17:14:50]  *** Listing of results directory ***
[2025-12-13 17:14:50] total 332356
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 17:14:50] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas       100 Dec 13 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:14:50] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 14:57 run_atlas
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas       105 Dec 13 14:57 job.xml
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas 190052807 Dec 13 14:57 EVNT.47886829._000207.pool.root.1
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:57 start_atlas.sh
[2025-12-13 17:14:50] drwxrwx--x 2 boincer umatlas      4096 Dec 13 14:57 shared
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 14:57 input.tar.gz
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas         0 Dec 13 14:57 boinc_lockfile
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 14:57 pandaJob.out
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas        57 Dec 13 14:57 setup.sh.local
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas    991736 Dec 13 14:57 agis_schedconf.cvmfs.json
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas   1516240 Dec 13 14:57 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:14:50] drwx------ 5 boincer umatlas      4096 Dec 13 14:57 pilot3
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 17:12 init_data.xml
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas 143310250 Dec 13 17:13 HITS.47886831._005176.pool.root.1
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas       529 Dec 13 17:13 boinc_task_state.xml
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas      1049 Dec 13 17:13 memory_monitor_summary.json
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas    381407 Dec 13 17:13 log.47886831._005176.job.log.tgz.1
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas      7838 Dec 13 17:13 heartbeat.json
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas        95 Dec 13 17:14 pilot_heartbeat.json
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:14 boinc_mmap_file
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas        27 Dec 13 17:14 wrapper_checkpoint.txt
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas      5003 Dec 13 17:14 pilotlog.txt
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas   1144452 Dec 13 17:14 log.47886831._005176.job.log.1
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas       357 Dec 13 17:14 output.list
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:14 runtime_log
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas   1546240 Dec 13 17:14 result.tar.gz
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas      9342 Dec 13 17:14 runtime_log.err
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas       660 Dec 13 17:14 2NxNDmd7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCVPKDmg4b9qm.diag
[2025-12-13 17:14:50] -rw-r--r-- 1 boincer umatlas     21227 Dec 13 17:14 stderr.txt
[2025-12-13 17:14:50] HITS file was successfully produced:
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas 143310250 Dec 13 17:13 shared/HITS.pool.root.1
[2025-12-13 17:14:50]  *** Contents of shared directory: ***
[2025-12-13 17:14:50] total 327660
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas 190052807 Dec 13 14:57 ATLAS.root_0
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:57 start_atlas.sh
[2025-12-13 17:14:50] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 14:57 input.tar.gz
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas 143310250 Dec 13 17:13 HITS.pool.root.1
[2025-12-13 17:14:50] -rw------- 1 boincer umatlas   1546240 Dec 13 17:14 result.tar.gz
17:14:51 (2811): run_atlas exited; CPU time 59600.930080
17:14:51 (2811): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN