Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:03:56 (28751): wrapper (7.7.26015): starting
15:03:56 (28751): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 15:03:56] Arguments: --nthreads 8
[2025-12-13 15:03:56] Threads: 8
[2025-12-13 15:03:56] Checking for CVMFS
[2025-12-13 15:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:03:56] 2.11.2.0 26356 132517 140168 153971 3 59 9946615 18432001 1833 130560 0 96853021 99.976 5565561 23504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:03:56] CVMFS is ok
[2025-12-13 15:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:03:56] Further information can be found at the LHC@home message board.
[2025-12-13 15:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:03:56] Checking for apptainer binary...
[2025-12-13 15:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:03:56] Running /usr/bin/apptainer --version
[2025-12-13 15:03:56] apptainer version 1.3.2-1.el7
[2025-12-13 15:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:03:57] c-206-6.aglt2.org
[2025-12-13 15:03:57] apptainer works
[2025-12-13 15:03:57] Set ATHENA_PROC_NUMBER=8
[2025-12-13 15:03:57] Set ATHENA_CORE_NUMBER=8
[2025-12-13 15:03:57] Starting ATLAS job with PandaID=6929310278
[2025-12-13 15:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:18:33]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:18:33] 2025-12-13 23:17:25,551 | INFO     | mean y: 2457777.236842105
[2025-12-13 18:18:33] 2025-12-13 23:17:25,551 | INFO     | intersect: -21081734000.602425
[2025-12-13 18:18:33] 2025-12-13 23:17:25,551 | INFO     | chi2: 1.3651775301873461
[2025-12-13 18:18:33] 2025-12-13 23:17:25,551 | INFO     | sum of square deviations: 1963274020.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,552 | INFO     | sum of deviations: 24629915221.999992
[2025-12-13 18:18:33] 2025-12-13 23:17:25,552 | INFO     | mean x: 1765661885.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,552 | INFO     | mean y: 2457062.0486486484
[2025-12-13 18:18:33] 2025-12-13 23:17:25,553 | INFO     | intersect: -22148349241.73298
[2025-12-13 18:18:33] 2025-12-13 23:17:25,553 | INFO     | chi2: 1.366084643639063
[2025-12-13 18:18:33] 2025-12-13 23:17:25,553 | INFO     | current chi2=1.366084643639063 (change=-0.06644655597227828 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,553 | INFO     | right removable region: 184
[2025-12-13 18:18:33] 2025-12-13 23:17:25,553 | INFO     | sum of square deviations: 1963274020.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,554 | INFO     | sum of deviations: -535042834.0000007
[2025-12-13 18:18:33] 2025-12-13 23:17:25,554 | INFO     | mean x: 1765662190.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,554 | INFO     | mean y: 2481639.32972973
[2025-12-13 18:18:33] 2025-12-13 23:17:25,554 | INFO     | intersect: 483670150.154239
[2025-12-13 18:18:33] 2025-12-13 23:17:25,555 | INFO     | chi2: 0.04769065677871235
[2025-12-13 18:18:33] 2025-12-13 23:17:25,555 | INFO     | current chi2=0.04769065677871235 (change=96.50663333345608 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,555 | INFO     | sum of square deviations: 1808350185.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,556 | INFO     | sum of deviations: 5521516595.499998
[2025-12-13 18:18:33] 2025-12-13 23:17:25,556 | INFO     | mean x: 1765662342.5
[2025-12-13 18:18:33] 2025-12-13 23:17:25,556 | INFO     | mean y: 2475668.761111111
[2025-12-13 18:18:33] 2025-12-13 23:17:25,556 | INFO     | intersect: -5388700225.725913
[2025-12-13 18:18:33] 2025-12-13 23:17:25,557 | INFO     | chi2: 0.006265129725190978
[2025-12-13 18:18:33] 2025-12-13 23:17:25,557 | INFO     | current chi2=0.006265129725190978 (change=86.86298292292015 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,557 | INFO     | sum of square deviations: 1661798600.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,558 | INFO     | sum of deviations: 5566381332.999999
[2025-12-13 18:18:33] 2025-12-13 23:17:25,558 | INFO     | mean x: 1765662495.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,558 | INFO     | mean y: 2475646.72
[2025-12-13 18:18:33] 2025-12-13 23:17:25,558 | INFO     | intersect: -5911809485.3930025
[2025-12-13 18:18:33] 2025-12-13 23:17:25,558 | INFO     | chi2: 0.0009815087896073995
[2025-12-13 18:18:33] 2025-12-13 23:17:25,559 | INFO     | current chi2=0.0009815087896073995 (change=84.33378345446023 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,559 | INFO     | sum of square deviations: 1523386702.5
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | sum of deviations: 4639555598.500003
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | mean x: 1765662647.5
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | mean y: 2476667.1705882354
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | intersect: -5374943266.866785
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | chi2: 0.0006998122294486016
[2025-12-13 18:18:33] 2025-12-13 23:17:25,560 | INFO     | current chi2=0.0006998122294486016 (change=28.700360418725918 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,561 | INFO     | sum of square deviations: 1392881930.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,561 | INFO     | sum of deviations: 4022310414.9999995
[2025-12-13 18:18:33] 2025-12-13 23:17:25,561 | INFO     | mean x: 1765662800.0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,561 | INFO     | mean y: 2477385.993939394
[2025-12-13 18:18:33] 2025-12-13 23:17:25,562 | INFO     | intersect: -5096335167.212248
[2025-12-13 18:18:33] 2025-12-13 23:17:25,562 | INFO     | chi2: 0.0006092410601489663
[2025-12-13 18:18:33] 2025-12-13 23:17:25,562 | INFO     | current chi2=0.0006092410601489663 (change=12.9422101369961 %)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,562 | INFO     | left removable region: 50
[2025-12-13 18:18:33] 2025-12-13 23:17:25,562 | INFO     | sum of square deviations: 746051197.5
[2025-12-13 18:18:33] 2025-12-13 23:17:25,563 | INFO     | sum of deviations: 1776685908.5000007
[2025-12-13 18:18:33] 2025-12-13 23:17:25,563 | INFO     | mean x: 1765663379.5
[2025-12-13 18:18:33] 2025-12-13 23:17:25,563 | INFO     | mean y: 2480233.380597015
[2025-12-13 18:18:33] 2025-12-13 23:17:25,563 | INFO     | intersect: -4202364227.72911
[2025-12-13 18:18:33] 2025-12-13 23:17:25,563 | INFO     | chi2: 0.0004095878086516285
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | current memory leak: 2.38 B/s (using 134 data points, chi2=0.00)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | could have reported an average CPU frequency of 2564 MHz (10 samples)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | ..............................
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | . Timing measurements:
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | . get job = 0 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | . initial setup = 2 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,564 | INFO     | . payload setup = 4 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,565 | INFO     | . stage-in = 0 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,565 | INFO     | . payload execution = 11561 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,565 | INFO     | . stage-out = 2 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,565 | INFO     | . log creation = 0 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,565 | INFO     | ..............................
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | 
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | job summary report
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | --------------------------------------------------
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | PanDA job id: 6929310278
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | task id: 47886831
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | errors: (none)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | pilot state: finished 
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | transexitcode: 0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | exeerrorcode: 0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | exeerrordiag: 
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | exitcode: 0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | exitmsg: OK
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | cpuconsumptiontime: 88596 s
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | nevents: 400
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | neventsw: 0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,682 | INFO     | pid: 6588
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | pgrp: 6588
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | corecount: 8
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | event service: False
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | sizes: {0: 2283819, 1: 2284018, 4: 2284280, 12: 2284308, 11570: 2313710, 11574: 2322708, 11577: 2322892, 11582: 2323086}
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | --------------------------------------------------
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | 
[2025-12-13 18:18:33] 2025-12-13 23:17:25,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 18:18:33] 2025-12-13 23:17:25,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:18:33] 2025-12-13 23:17:25,704 | INFO     | job 6929310278 has completed (purged errors)
[2025-12-13 18:18:33] 2025-12-13 23:17:25,704 | INFO     | overall cleanup function is called
[2025-12-13 18:18:33] 2025-12-13 23:17:26,712 | INFO     | --- collectZombieJob: --- 10, [6588]
[2025-12-13 18:18:33] 2025-12-13 23:17:26,712 | INFO     | zombie collector waiting for pid 6588
[2025-12-13 18:18:33] 2025-12-13 23:17:26,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:18:33] 2025-12-13 23:17:26,712 | INFO     | collected zombie processes
[2025-12-13 18:18:33] 2025-12-13 23:17:26,712 | INFO     | will attempt to kill all subprocesses of pid=6588
[2025-12-13 18:18:33] 2025-12-13 23:17:26,883 | INFO     | process IDs to be killed: [6588] (in reverse order)
[2025-12-13 18:18:33] 2025-12-13 23:17:26,947 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:18:33] 2025-12-13 23:17:26,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:18:33] 2025-12-13 23:17:26,953 | INFO     | did not find any defunct processes belonging to 6588
[2025-12-13 18:18:33] 2025-12-13 23:17:26,957 | INFO     | did not find any defunct processes belonging to 6588
[2025-12-13 18:18:33] 2025-12-13 23:17:26,957 | INFO     | ready for new job
[2025-12-13 18:18:33] 2025-12-13 23:17:26,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:18:33] 2025-12-13 23:17:26,958 | INFO     | ***************************************
[2025-12-13 18:18:33] 2025-12-13 23:17:26,958 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:18:33] 2025-12-13 23:17:26,959 | INFO     | ***************************************
[2025-12-13 18:18:33] 2025-12-13 23:17:26,959 | INFO     | 
[2025-12-13 18:18:33] 2025-12-13 23:17:26,959 | INFO     | architecture information:
[2025-12-13 18:18:33] 2025-12-13 23:17:26,960 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:18:33] 2025-12-13 23:17:26,975 | INFO     | cat /etc/os-release:
[2025-12-13 18:18:33] NAME="CentOS Linux"
[2025-12-13 18:18:33] VERSION="7 (Core)"
[2025-12-13 18:18:33] ID="centos"
[2025-12-13 18:18:33] ID_LIKE="rhel fedora"
[2025-12-13 18:18:33] VERSION_ID="7"
[2025-12-13 18:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:18:33] ANSI_COLOR="0;31"
[2025-12-13 18:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:18:33] HOME_URL="https://www.centos.org/"
[2025-12-13 18:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:18:33] 
[2025-12-13 18:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:18:33] 
[2025-12-13 18:18:33] 2025-12-13 23:17:26,975 | INFO     | ***************************************
[2025-12-13 18:18:33] 2025-12-13 23:17:27,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 18:18:33] 2025-12-13 23:17:27,494 | INFO     | sufficient remaining disk space (28235005952 B)
[2025-12-13 18:18:33] 2025-12-13 23:17:27,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:18:33] 2025-12-13 23:17:27,494 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:18:33] 2025-12-13 23:17:27,495 | INFO     | update_server=False
[2025-12-13 18:18:33] 2025-12-13 23:17:27,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:18:33] 2025-12-13 23:17:27,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:18:33] 2025-12-13 23:17:27,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:18:33] 2025-12-13 23:17:27,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:18:33] 2025-12-13 23:17:27,496 | INFO     | aborting loop
[2025-12-13 18:18:33] 2025-12-13 23:17:27,650 | INFO     | all payload control threads have been joined
[2025-12-13 18:18:33] 2025-12-13 23:17:28,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:18:33] 2025-12-13 23:17:28,312 | INFO     | all data control threads have been joined
[2025-12-13 18:18:33] 2025-12-13 23:17:28,501 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:28,501 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:28,502 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:28,655 | INFO     | [payload] control thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:28,758 | INFO     | all job control threads have been joined
[2025-12-13 18:18:33] 2025-12-13 23:17:28,776 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,053 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,320 | INFO     | [data] control thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,664 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,689 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,754 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,764 | INFO     | [job] control thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,774 | INFO     | [job] validate thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:29,850 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:30,200 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:31,504 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:18:33] 2025-12-13 23:17:56,950 | INFO     | PID=32498 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 18:18:33] 2025-12-13 23:17:56,950 | INFO     | .. there are 3 such processes running
[2025-12-13 18:18:33] 2025-12-13 23:17:56,950 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:18:33] 2025-12-13 23:17:56,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:18:33] 2025-12-13 23:17:56,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:18:33] 2025-12-13 23:18:26,760 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:18:33] 2025-12-13 23:18:27,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058006239040)>', '<ExcThread(monitor, started 140057574881024)>']
[2025-12-13 18:18:33] 2025-12-13 23:18:28,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:18:33] 2025-12-13 23:18:28,106 | INFO     | [monitor] control thread has ended
[2025-12-13 18:18:33] 2025-12-13 23:18:32,713 | INFO     | all workflow threads have been joined
[2025-12-13 18:18:33] 2025-12-13 23:18:32,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:18:33] 2025-12-13 23:18:32,713 | INFO     | traces error code: 0
[2025-12-13 18:18:33] 2025-12-13 23:18:32,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:18:33] 2025-12-13 23:18:32,840 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:18:33] 2025-12-13 23:18:32,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:18:33] 2025-12-13 23:18:32,846 [wrapper] pilotpid: 32498
[2025-12-13 18:18:33] 2025-12-13 23:18:32,848 [wrapper] Pilot exit status: 0
[2025-12-13 18:18:33] 2025-12-13 23:18:32,858 [wrapper] pandaids: 6929310278
[2025-12-13 18:18:33] 2025-12-13 23:18:32,903 [wrapper] cleanup supervisor_pilot  1768 32499
[2025-12-13 18:18:33] 2025-12-13 23:18:32,906 [wrapper] Test setup, not cleaning
[2025-12-13 18:18:33] 2025-12-13 23:18:32,908 [wrapper] apfmon messages muted
[2025-12-13 18:18:33] 2025-12-13 23:18:32,910 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:18:33] 2025-12-13 23:18:32,912 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:18:33]  *** Error codes and diagnostics ***
[2025-12-13 18:18:33]     "exeErrorCode": 0,
[2025-12-13 18:18:33]     "exeErrorDiag": "",
[2025-12-13 18:18:33]     "pilotErrorCode": 0,
[2025-12-13 18:18:33]     "pilotErrorDiag": "",
[2025-12-13 18:18:33]  *** Listing of results directory ***
[2025-12-13 18:18:33] total 338604
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 18:18:33] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:18:33] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:03 run_atlas
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:03 job.xml
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas 190964975 Dec 13 15:03 EVNT.47886829._000202.pool.root.1
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:03 start_atlas.sh
[2025-12-13 18:18:33] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:03 shared
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 15:03 input.tar.gz
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:03 boinc_lockfile
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas      2538 Dec 13 15:03 pandaJob.out
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas        57 Dec 13 15:03 setup.sh.local
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas    991736 Dec 13 15:04 agis_schedconf.cvmfs.json
[2025-12-13 18:18:33] drwx------ 5 boincer umatlas      4096 Dec 13 15:04 pilot3
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 18:09 init_data.xml
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas 147729549 Dec 13 18:16 HITS.47886831._005051.pool.root.1
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas       530 Dec 13 18:17 boinc_task_state.xml
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas        95 Dec 13 18:17 pilot_heartbeat.json
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas      1052 Dec 13 18:17 memory_monitor_summary.json
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas   1516240 Dec 13 18:17 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas    432624 Dec 13 18:17 log.47886831._005051.job.log.tgz.1
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas      7855 Dec 13 18:17 heartbeat.json
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 18:18 boinc_mmap_file
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas        28 Dec 13 18:18 wrapper_checkpoint.txt
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas      4821 Dec 13 18:18 pilotlog.txt
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas   1624160 Dec 13 18:18 log.47886831._005051.job.log.1
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas       357 Dec 13 18:18 output.list
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas       620 Dec 13 18:18 runtime_log
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas   2078720 Dec 13 18:18 result.tar.gz
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 18:18 runtime_log.err
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas       661 Dec 13 18:18 dxxLDma7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmybTKDmHJhRAo.diag
[2025-12-13 18:18:33] -rw-r--r-- 1 boincer umatlas     20892 Dec 13 18:18 stderr.txt
[2025-12-13 18:18:33] HITS file was successfully produced:
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas 147729549 Dec 13 18:16 shared/HITS.pool.root.1
[2025-12-13 18:18:33]  *** Contents of shared directory: ***
[2025-12-13 18:18:33] total 333392
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas 190964975 Dec 13 15:03 ATLAS.root_0
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:03 start_atlas.sh
[2025-12-13 18:18:33] -rw-r--r-- 2 boincer umatlas    592410 Dec 13 15:03 input.tar.gz
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas 147729549 Dec 13 18:16 HITS.pool.root.1
[2025-12-13 18:18:33] -rw------- 1 boincer umatlas   2078720 Dec 13 18:18 result.tar.gz
18:18:34 (28751): run_atlas exited; CPU time 88769.034307
18:18:34 (28751): called boinc_finish(0)

</stderr_txt>
]]>

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