Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:49:46 (2175265): wrapper (7.7.26015): starting
17:49:46 (2175265): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 17:49:46] Arguments: --nthreads 8
[2025-12-13 17:49:46] Threads: 8
[2025-12-13 17:49:46] Checking for CVMFS
[2025-12-13 17:49:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 17:49:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 17:49:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 17:49:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 17:49:47] 2.13.2.0 6383 59450 261612 153975 3 519 34573450 40960001 11894 16776704 0 74168036 99.731 47439322 37079 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 17:49:47] CVMFS is ok
[2025-12-13 17:49:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 17:49:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 17:49:47] Further information can be found at the LHC@home message board.
[2025-12-13 17:49:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 17:49:47] Checking for apptainer binary...
[2025-12-13 17:49:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 17:49:47] Running /usr/bin/apptainer --version
[2025-12-13 17:49:47] apptainer version 1.4.4-1.el9
[2025-12-13 17:49:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 17:49:48] c-210-37-2.aglt2.org
[2025-12-13 17:49:48] apptainer works
[2025-12-13 17:49:48] Set ATHENA_PROC_NUMBER=8
[2025-12-13 17:49:48] Set ATHENA_CORE_NUMBER=8
[2025-12-13 17:49:48] Starting ATLAS job with PandaID=6929310240
[2025-12-13 17:49:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:54:20]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:54:20] 2025-12-14 01:53:42,239 | INFO     | .. there are 10 such processes running
[2025-12-13 20:54:20] 2025-12-14 01:53:43,240 | INFO     | time since job start (10990s) is within the limit (174528.0s)
[2025-12-13 20:54:20] 2025-12-14 01:53:44,256 | INFO     | monitor loop #780: job 0:6929310240 is in state 'finished'
[2025-12-13 20:54:20] 2025-12-14 01:53:44,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:54:20] 2025-12-14 01:53:45,250 | INFO     | time since job start (10992s) is within the limit (174528.0s)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,647 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 20:54:20] 2025-12-14 01:53:46,683 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2688.5119821428584
[2025-12-13 20:54:20] 2025-12-14 01:53:46,708 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310240/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,709 | INFO     | extracted standard info from prmon json
[2025-12-13 20:54:20] 2025-12-14 01:53:46,709 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:54:20] 2025-12-14 01:53:46,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:54:20] 2025-12-14 01:53:46,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:54:20] 2025-12-14 01:53:46,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:54:20] 2025-12-14 01:53:46,720 | INFO     | fitting pss+swap vs Time
[2025-12-13 20:54:20] 2025-12-14 01:53:46,721 | INFO     | sum of square deviations: 1748670721.5112333
[2025-12-13 20:54:20] 2025-12-14 01:53:46,722 | INFO     | sum of deviations: 50156929231.47751
[2025-12-13 20:54:20] 2025-12-14 01:53:46,730 | INFO     | mean x: 1765671737.724719
[2025-12-13 20:54:20] 2025-12-14 01:53:46,730 | INFO     | mean y: 2447520.050561798
[2025-12-13 20:54:20] 2025-12-14 01:53:46,730 | INFO     | intersect: -50642119982.36801
[2025-12-13 20:54:20] 2025-12-14 01:53:46,731 | INFO     | chi2: 1.9360622145236417
[2025-12-13 20:54:20] 2025-12-14 01:53:46,731 | INFO     | sum of square deviations: 1605415118.7514534
[2025-12-13 20:54:20] 2025-12-14 01:53:46,732 | INFO     | sum of deviations: 48662127041.26012
[2025-12-13 20:54:20] 2025-12-14 01:53:46,732 | INFO     | mean x: 1765671585.2312138
[2025-12-13 20:54:20] 2025-12-14 01:53:46,732 | INFO     | mean y: 2445928.61849711
[2025-12-13 20:54:20] 2025-12-14 01:53:46,732 | INFO     | intersect: -53517253736.65331
[2025-12-13 20:54:20] 2025-12-14 01:53:46,733 | INFO     | chi2: 1.9348215535560171
[2025-12-13 20:54:20] 2025-12-14 01:53:46,733 | INFO     | current chi2=1.9348215535560171 (change=0.0640816683636274 %)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,733 | INFO     | right removable region: 172
[2025-12-13 20:54:20] 2025-12-14 01:53:46,733 | INFO     | sum of square deviations: 1605401454.2080991
[2025-12-13 20:54:20] 2025-12-14 01:53:46,739 | INFO     | sum of deviations: 17329744715.329475
[2025-12-13 20:54:20] 2025-12-14 01:53:46,739 | INFO     | mean x: 1765671890.2254336
[2025-12-13 20:54:20] 2025-12-14 01:53:46,739 | INFO     | mean y: 2482106.606936416
[2025-12-13 20:54:20] 2025-12-14 01:53:46,740 | INFO     | intersect: -19057325661.994774
[2025-12-13 20:54:20] 2025-12-14 01:53:46,740 | INFO     | chi2: 0.14542627339404585
[2025-12-13 20:54:20] 2025-12-14 01:53:46,740 | INFO     | current chi2=0.14542627339404585 (change=92.48855370952904 %)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,740 | INFO     | sum of square deviations: 1470179215.4047577
[2025-12-13 20:54:20] 2025-12-14 01:53:46,741 | INFO     | sum of deviations: 14528427789.53571
[2025-12-13 20:54:20] 2025-12-14 01:53:46,741 | INFO     | mean x: 1765672042.7261906
[2025-12-13 20:54:20] 2025-12-14 01:53:46,741 | INFO     | mean y: 2485233.9464285714
[2025-12-13 20:54:20] 2025-12-14 01:53:46,741 | INFO     | intersect: -17446026147.49563
[2025-12-13 20:54:20] 2025-12-14 01:53:46,742 | INFO     | chi2: 0.13845295072662545
[2025-12-13 20:54:20] 2025-12-14 01:53:46,742 | INFO     | current chi2=0.13845295072662545 (change=4.7950913577531775 %)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,742 | INFO     | left removable region: 20
[2025-12-13 20:54:20] 2025-12-14 01:53:46,742 | INFO     | sum of square deviations: 1088837286.99342
[2025-12-13 20:54:20] 2025-12-14 01:53:46,751 | INFO     | sum of deviations: 2945470363.9013166
[2025-12-13 20:54:20] 2025-12-14 01:53:46,752 | INFO     | mean x: 1765672164.743421
[2025-12-13 20:54:20] 2025-12-14 01:53:46,752 | INFO     | mean y: 2499647.1513157897
[2025-12-13 20:54:20] 2025-12-14 01:53:46,752 | INFO     | intersect: -4773911939.540296
[2025-12-13 20:54:20] 2025-12-14 01:53:46,752 | INFO     | chi2: 0.009865341210848241
[2025-12-13 20:54:20] 2025-12-14 01:53:46,752 | INFO     | current memory leak: 2.71 B/s (using 152 data points, chi2=0.01)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,753 | INFO     | could have reported an average CPU frequency of 2685 MHz (9 samples)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,753 | INFO     | ..............................
[2025-12-13 20:54:20] 2025-12-14 01:53:46,753 | INFO     | . Timing measurements:
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . get job = 1 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . initial setup = 4 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . payload setup = 29 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . stage-in = 0 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . payload execution = 10872 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . stage-out = 3 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | . log creation = 0 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,754 | INFO     | ..............................
[2025-12-13 20:54:20] 2025-12-14 01:53:46,763 | INFO     | monitor loop #781: job 0:6929310240 is in state 'finished'
[2025-12-13 20:54:20] 2025-12-14 01:53:46,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,939 | INFO     | 
[2025-12-13 20:54:20] 2025-12-14 01:53:46,939 | INFO     | job summary report
[2025-12-13 20:54:20] 2025-12-14 01:53:46,939 | INFO     | --------------------------------------------------
[2025-12-13 20:54:20] 2025-12-14 01:53:46,939 | INFO     | PanDA job id: 6929310240
[2025-12-13 20:54:20] 2025-12-14 01:53:46,939 | INFO     | task id: 47886831
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | errors: (none)
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | pilot state: finished 
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | transexitcode: 0
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | exeerrorcode: 0
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | exeerrordiag: 
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | exitcode: 0
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | exitmsg: OK
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | cpuconsumptiontime: 43468 s
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | nevents: 400
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | neventsw: 0
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | pid: 2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | pgrp: 2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | corecount: 8
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | event service: False
[2025-12-13 20:54:20] 2025-12-14 01:53:46,940 | INFO     | sizes: {0: 2283819, 1: 2284018, 12: 2284018, 19: 2284308, 23: 2284336, 10907: 2313654, 10910: 2322652, 10913: 2322708, 10942: 2322966}
[2025-12-13 20:54:20] 2025-12-14 01:53:46,941 | INFO     | --------------------------------------------------
[2025-12-13 20:54:20] 2025-12-14 01:53:46,941 | INFO     | 
[2025-12-13 20:54:20] 2025-12-14 01:53:46,941 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 20:54:20] 2025-12-14 01:53:47,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | job 6929310240 has completed (purged errors)
[2025-12-13 20:54:20] 2025-12-14 01:53:47,006 | INFO     | overall cleanup function is called
[2025-12-13 20:54:20] 2025-12-14 01:53:48,019 | INFO     | --- collectZombieJob: --- 10, [2188148]
[2025-12-13 20:54:20] 2025-12-14 01:53:48,019 | INFO     | zombie collector waiting for pid 2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:48,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:54:20] 2025-12-14 01:53:48,019 | INFO     | collected zombie processes
[2025-12-13 20:54:20] 2025-12-14 01:53:48,019 | INFO     | will attempt to kill all subprocesses of pid=2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:48,472 | INFO     | process IDs to be killed: [2188148] (in reverse order)
[2025-12-13 20:54:20] 2025-12-14 01:53:48,571 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:54:20] 2025-12-14 01:53:48,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:54:20] 2025-12-14 01:53:48,589 | INFO     | did not find any defunct processes belonging to 2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:48,605 | INFO     | did not find any defunct processes belonging to 2188148
[2025-12-13 20:54:20] 2025-12-14 01:53:48,606 | INFO     | ready for new job
[2025-12-13 20:54:20] 2025-12-14 01:53:48,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:54:20] 2025-12-14 01:53:48,612 | INFO     | ***************************************
[2025-12-13 20:54:20] 2025-12-14 01:53:48,613 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:54:20] 2025-12-14 01:53:48,613 | INFO     | ***************************************
[2025-12-13 20:54:20] 2025-12-14 01:53:48,613 | INFO     | 
[2025-12-13 20:54:20] 2025-12-14 01:53:48,619 | INFO     | architecture information:
[2025-12-13 20:54:20] 2025-12-14 01:53:48,620 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:54:20] 2025-12-14 01:53:48,669 | INFO     | cat /etc/os-release:
[2025-12-13 20:54:20] NAME="CentOS Linux"
[2025-12-13 20:54:20] VERSION="7 (Core)"
[2025-12-13 20:54:20] ID="centos"
[2025-12-13 20:54:20] ID_LIKE="rhel fedora"
[2025-12-13 20:54:20] VERSION_ID="7"
[2025-12-13 20:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:54:20] ANSI_COLOR="0;31"
[2025-12-13 20:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:54:20] HOME_URL="https://www.centos.org/"
[2025-12-13 20:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:54:20] 
[2025-12-13 20:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:54:20] 
[2025-12-13 20:54:20] 2025-12-14 01:53:48,670 | INFO     | ***************************************
[2025-12-13 20:54:20] 2025-12-14 01:53:49,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 20:54:20] 2025-12-14 01:53:49,229 | INFO     | sufficient remaining disk space (74421633024 B)
[2025-12-13 20:54:20] 2025-12-14 01:53:49,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:54:20] 2025-12-14 01:53:49,230 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:54:20] 2025-12-14 01:53:49,230 | INFO     | update_server=False
[2025-12-13 20:54:20] 2025-12-14 01:53:49,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:54:20] 2025-12-14 01:53:49,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:54:20] 2025-12-14 01:53:49,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 20:54:20] 2025-12-14 01:53:49,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 20:54:20] 2025-12-14 01:53:49,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:54:20] 2025-12-14 01:53:49,276 | INFO     | will abort loop
[2025-12-13 20:54:20] 2025-12-14 01:53:49,391 | INFO     | all job control threads have been joined
[2025-12-13 20:54:20] 2025-12-14 01:53:49,794 | INFO     | all payload control threads have been joined
[2025-12-13 20:54:20] 2025-12-14 01:53:49,913 | INFO     | all data control threads have been joined
[2025-12-13 20:54:20] 2025-12-14 01:53:50,236 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,282 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,398 | INFO     | [job] control thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,568 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,802 | INFO     | [payload] control thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,834 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,835 | INFO     | [job] validate thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,918 | INFO     | [data] control thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:50,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:54:20] 2025-12-14 01:53:51,040 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:54:20] 2025-12-14 01:53:51,121 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:51,237 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:51,354 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:51,619 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:51,813 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:51,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:54:20] 2025-12-14 01:53:52,960 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:54,941 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:54:20] 2025-12-14 01:53:56,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873339107136)>', '<ExcThread(monitor, started 139872715138816)>']
[2025-12-13 20:54:20] 2025-12-14 01:54:01,735 | INFO     | all workflow threads have been joined
[2025-12-13 20:54:20] 2025-12-14 01:54:01,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:54:20] 2025-12-14 01:54:01,736 | INFO     | traces error code: 0
[2025-12-13 20:54:20] 2025-12-14 01:54:01,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | INFO     | PID=2180759 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | INFO     | .. there are 10 such processes running
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:54:20] 2025-12-14 01:54:19,031 | INFO     | [monitor] control thread has ended
[2025-12-13 20:54:20] 2025-12-14 01:54:19,361 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:54:20] 2025-12-14 01:54:19,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:54:20] 2025-12-14 01:54:19,390 [wrapper] pilotpid: 2180759
[2025-12-13 20:54:20] 2025-12-14 01:54:19,405 [wrapper] Pilot exit status: 0
[2025-12-13 20:54:20] 2025-12-14 01:54:19,498 [wrapper] pandaids: 6929310240
[2025-12-13 20:54:20] 2025-12-14 01:54:19,631 [wrapper] cleanup supervisor_pilot 2565428 2180760
[2025-12-13 20:54:20] 2025-12-14 01:54:19,654 [wrapper] Test setup, not cleaning
[2025-12-13 20:54:20] 2025-12-14 01:54:19,673 [wrapper] apfmon messages muted
[2025-12-13 20:54:20] 2025-12-14 01:54:19,696 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:54:20] 2025-12-14 01:54:19,715 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:54:20]  *** Error codes and diagnostics ***
[2025-12-13 20:54:20]     "exeErrorCode": 0,
[2025-12-13 20:54:20]     "exeErrorDiag": "",
[2025-12-13 20:54:20]     "pilotErrorCode": 0,
[2025-12-13 20:54:20]     "pilotErrorDiag": "",
[2025-12-13 20:54:20]  *** Listing of results directory ***
[2025-12-13 20:54:20] total 344376
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 20:54:20] -rwx------. 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas       100 Dec 13 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:54:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 17:49 run_atlas
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas       105 Dec 13 17:49 job.xml
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas 194770892 Dec 13 17:49 EVNT.47886829._000201.pool.root.1
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 17:49 start_atlas.sh
[2025-12-13 20:54:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 17:49 shared
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas    592409 Dec 13 17:49 input.tar.gz
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas         0 Dec 13 17:49 boinc_lockfile
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas      2538 Dec 13 17:49 pandaJob.out
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas        57 Dec 13 17:49 setup.sh.local
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas    991728 Dec 13 17:50 agis_schedconf.cvmfs.json
[2025-12-13 20:54:20] drwx------. 5 boincer umatlas      4096 Dec 13 17:50 pilot3
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas      6844 Dec 13 20:49 init_data.xml
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas 150122455 Dec 13 20:52 HITS.47886831._005013.pool.root.1
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas       530 Dec 13 20:52 boinc_task_state.xml
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas      1042 Dec 13 20:53 memory_monitor_summary.json
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas   1516240 Dec 13 20:53 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas    404576 Dec 13 20:53 log.47886831._005013.job.log.tgz.1
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas        95 Dec 13 20:53 pilot_heartbeat.json
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas      7825 Dec 13 20:53 heartbeat.json
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 20:54 boinc_mmap_file
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas        28 Dec 13 20:54 wrapper_checkpoint.txt
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas       823 Dec 13 20:54 pilotlog.txt
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas   1513153 Dec 13 20:54 log.47886831._005013.job.log.1
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas       357 Dec 13 20:54 output.list
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas       620 Dec 13 20:54 runtime_log
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas   1935360 Dec 13 20:54 result.tar.gz
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas       656 Dec 13 20:54 SsXLDma7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbbTKDmIUQCrn.diag
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas      9353 Dec 13 20:54 runtime_log.err
[2025-12-13 20:54:20] -rw-r--r--. 1 boincer umatlas     21382 Dec 13 20:54 stderr.txt
[2025-12-13 20:54:20] HITS file was successfully produced:
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas 150122455 Dec 13 20:52 shared/HITS.pool.root.1
[2025-12-13 20:54:20]  *** Contents of shared directory: ***
[2025-12-13 20:54:20] total 339304
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas 194770892 Dec 13 17:49 ATLAS.root_0
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 17:49 start_atlas.sh
[2025-12-13 20:54:20] -rw-r--r--. 2 boincer umatlas    592409 Dec 13 17:49 input.tar.gz
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas 150122455 Dec 13 20:52 HITS.pool.root.1
[2025-12-13 20:54:20] -rw-------. 1 boincer umatlas   1935360 Dec 13 20:54 result.tar.gz
20:54:21 (2175265): run_atlas exited; CPU time 43721.011455
20:54:21 (2175265): called boinc_finish(0)

</stderr_txt>
]]>

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