Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:39 (23953): wrapper (7.7.26015): starting
15:00:39 (23953): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 15:00:39] Arguments: --nthreads 12
[2025-12-13 15:00:39] Threads: 12
[2025-12-13 15:00:39] Checking for CVMFS
[2025-12-13 15:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:00:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:00:39] 2.11.2.0 2991 312568 94544 153971 3 59 16018027 20275200 1 130560 1 137781698 99.959 19069221 15401 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 15:00:39] CVMFS is ok
[2025-12-13 15:00:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:00:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:00:39] Further information can be found at the LHC@home message board.
[2025-12-13 15:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:00:39] Checking for apptainer binary...
[2025-12-13 15:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:00:39] Running /usr/bin/apptainer --version
[2025-12-13 15:00:39] apptainer version 1.3.2-1.el7
[2025-12-13 15:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:00:41] c-205-32.aglt2.org
[2025-12-13 15:00:41] apptainer works
[2025-12-13 15:00:41] Set ATHENA_PROC_NUMBER=12
[2025-12-13 15:00:41] Set ATHENA_CORE_NUMBER=12
[2025-12-13 15:00:41] Starting ATLAS job with PandaID=6929310136
[2025-12-13 15:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:20:29]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:20:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/e5/log.47886831._004909.job.log.tgz.1
[2025-12-13 16:20:29]  workdir=None
[2025-12-13 16:20:29] ]
[2025-12-13 16:20:29] 2025-12-13 21:19:46,156 | INFO     | transferring file log.47886831._004909.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929310136/log.47886831._004909.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 16:20:29] 2025-12-13 21:19:46,157 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929310136/log.47886831._004909.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._004909.job
[2025-12-13 16:20:29] 2025-12-13 21:19:46,178 | INFO     | adding to output.list: log.47886831._004909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/e5/log.47886831._004909.job.log.tg
[2025-12-13 16:20:29] 2025-12-13 21:19:46,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 16:20:29] 2025-12-13 21:19:46,179 | INFO     | summary of transferred files:
[2025-12-13 16:20:29] 2025-12-13 21:19:46,180 | INFO     |  -- lfn=log.47886831._004909.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 16:20:29] 2025-12-13 21:19:46,180 | INFO     | stage-out finished correctly
[2025-12-13 16:20:29] 2025-12-13 21:19:46,432 | WARNING  | process 2200 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 16:20:29] 2025-12-13 21:19:46,432 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310136/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:20:29] 2025-12-13 21:19:46,516 | INFO     | number of running child processes to parent process 2200: 1
[2025-12-13 16:20:29] 2025-12-13 21:19:46,516 | INFO     | maximum number of monitored processes: 6
[2025-12-13 16:20:29] 2025-12-13 21:19:47,621 | INFO     | time since job start (4731s) is within the limit (174528.0s)
[2025-12-13 16:20:29] 2025-12-13 21:19:49,019 | INFO     | monitor loop #352: job 0:6929310136 is in state 'finished'
[2025-12-13 16:20:29] 2025-12-13 21:19:49,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:20:29] 2025-12-13 21:19:49,411 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 16:20:29] 2025-12-13 21:19:49,627 | INFO     | time since job start (4733s) is within the limit (174528.0s)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,440 | INFO     | job 6929310136 has state=finished
[2025-12-13 16:20:29] 2025-12-13 21:19:51,441 | INFO     | preparing for final server update for job 6929310136 in state='finished'
[2025-12-13 16:20:29] 2025-12-13 21:19:51,499 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,499 | INFO     | this job has now completed (state=finished)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,499 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,499 | INFO     | log transfer has been attempted: DONE
[2025-12-13 16:20:29] 2025-12-13 21:19:51,500 | INFO     | job 6929310136 has finished - writing final server update
[2025-12-13 16:20:29] 2025-12-13 21:19:51,500 | INFO     | total number of processed events: 400 (read)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,501 | INFO     | executing command: lscpu
[2025-12-13 16:20:29] 2025-12-13 21:19:51,523 | INFO     | monitor loop #353: job 0:6929310136 is in state 'finished'
[2025-12-13 16:20:29] 2025-12-13 21:19:51,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:20:29] 2025-12-13 21:19:51,526 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 16:20:29] 2025-12-13 21:19:51,633 | INFO     | time since job start (4735s) is within the limit (174528.0s)
[2025-12-13 16:20:29] 2025-12-13 21:19:53,638 | INFO     | time since job start (4737s) is within the limit (174528.0s)
[2025-12-13 16:20:29] 2025-12-13 21:19:54,026 | INFO     | monitor loop #354: job 0:6929310136 is in state 'finished'
[2025-12-13 16:20:29] 2025-12-13 21:19:54,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:20:29] 2025-12-13 21:19:55,644 | INFO     | time since job start (4739s) is within the limit (174528.0s)
[2025-12-13 16:20:29] 2025-12-13 21:19:56,529 | INFO     | monitor loop #355: job 0:6929310136 is in state 'finished'
[2025-12-13 16:20:29] 2025-12-13 21:19:56,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,227 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 16:20:29] 2025-12-13 21:19:57,231 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-12-13 16:20:29] 2025-12-13 21:19:57,234 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929310136/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,235 | INFO     | extracted standard info from prmon json
[2025-12-13 16:20:29] 2025-12-13 21:19:57,235 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:20:29] 2025-12-13 21:19:57,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:20:29] 2025-12-13 21:19:57,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:20:29] 2025-12-13 21:19:57,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:20:29] 2025-12-13 21:19:57,238 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:20:29] 2025-12-13 21:19:57,238 | INFO     | sum of square deviations: 110960220.0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,238 | INFO     | sum of deviations: -3068020437.0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | mean x: 1765658524.0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | mean y: 2692617.5070422534
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | intersect: 48822679063.05712
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | chi2: 0.0661035073012042
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | current memory leak: -27.65 B/s (using 71 data points, chi2=0.07)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,239 | INFO     | could have reported an average CPU frequency of 2054 MHz (6 samples)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | ..............................
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . Timing measurements:
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . get job = 0 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . initial setup = 2 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . payload setup = 6 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . stage-in = 0 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . payload execution = 4705 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . stage-out = 0 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,240 | INFO     | . log creation = 0 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,241 | INFO     | ..............................
[2025-12-13 16:20:29] 2025-12-13 21:19:57,489 | INFO     | 
[2025-12-13 16:20:29] 2025-12-13 21:19:57,489 | INFO     | job summary report
[2025-12-13 16:20:29] 2025-12-13 21:19:57,489 | INFO     | --------------------------------------------------
[2025-12-13 16:20:29] 2025-12-13 21:19:57,489 | INFO     | PanDA job id: 6929310136
[2025-12-13 16:20:29] 2025-12-13 21:19:57,489 | INFO     | task id: 47886831
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | errors: (none)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | pilot state: finished 
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | transexitcode: 0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | exeerrorcode: 0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | exeerrordiag: 
[2025-12-13 16:20:29] 2025-12-13 21:19:57,490 | INFO     | exitcode: 0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | exitmsg: OK
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | cpuconsumptiontime: 50430 s
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | nevents: 400
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | neventsw: 0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | pid: 2200
[2025-12-13 16:20:29] 2025-12-13 21:19:57,491 | INFO     | pgrp: 2200
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | corecount: 12
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | event service: False
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | sizes: {0: 2283984, 5: 2284246, 11: 2284302, 4713: 2310450, 4714: 2319503, 4718: 2319503, 4725: 2319825}
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | --------------------------------------------------
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | 
[2025-12-13 16:20:29] 2025-12-13 21:19:57,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 16:20:29] 2025-12-13 21:19:57,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:20:29] 2025-12-13 21:19:57,522 | INFO     | job 6929310136 has completed (purged errors)
[2025-12-13 16:20:29] 2025-12-13 21:19:57,522 | INFO     | overall cleanup function is called
[2025-12-13 16:20:29] 2025-12-13 21:19:58,530 | INFO     | --- collectZombieJob: --- 10, [2200]
[2025-12-13 16:20:29] 2025-12-13 21:19:58,530 | INFO     | zombie collector waiting for pid 2200
[2025-12-13 16:20:29] 2025-12-13 21:19:58,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:20:29] 2025-12-13 21:19:58,531 | INFO     | collected zombie processes
[2025-12-13 16:20:29] 2025-12-13 21:19:58,531 | INFO     | will attempt to kill all subprocesses of pid=2200
[2025-12-13 16:20:29] 2025-12-13 21:19:58,624 | INFO     | process IDs to be killed: [2200] (in reverse order)
[2025-12-13 16:20:29] 2025-12-13 21:19:58,678 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:20:29] 2025-12-13 21:19:58,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:20:29] 2025-12-13 21:19:58,681 | INFO     | did not find any defunct processes belonging to 2200
[2025-12-13 16:20:29] 2025-12-13 21:19:58,684 | INFO     | did not find any defunct processes belonging to 2200
[2025-12-13 16:20:29] 2025-12-13 21:19:58,685 | INFO     | ready for new job
[2025-12-13 16:20:29] 2025-12-13 21:19:58,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:20:29] 2025-12-13 21:19:58,686 | INFO     | ***************************************
[2025-12-13 16:20:29] 2025-12-13 21:19:58,687 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:20:29] 2025-12-13 21:19:58,687 | INFO     | ***************************************
[2025-12-13 16:20:29] 2025-12-13 21:19:58,687 | INFO     | 
[2025-12-13 16:20:29] 2025-12-13 21:19:58,688 | INFO     | architecture information:
[2025-12-13 16:20:29] 2025-12-13 21:19:58,688 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:20:29] 2025-12-13 21:19:58,703 | INFO     | cat /etc/os-release:
[2025-12-13 16:20:29] NAME="CentOS Linux"
[2025-12-13 16:20:29] VERSION="7 (Core)"
[2025-12-13 16:20:29] ID="centos"
[2025-12-13 16:20:29] ID_LIKE="rhel fedora"
[2025-12-13 16:20:29] VERSION_ID="7"
[2025-12-13 16:20:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:20:29] ANSI_COLOR="0;31"
[2025-12-13 16:20:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:20:29] HOME_URL="https://www.centos.org/"
[2025-12-13 16:20:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:20:29] 
[2025-12-13 16:20:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:20:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:20:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:20:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:20:29] 
[2025-12-13 16:20:29] 2025-12-13 21:19:58,703 | INFO     | ***************************************
[2025-12-13 16:20:29] 2025-12-13 21:19:59,206 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 16:20:29] 2025-12-13 21:19:59,223 | INFO     | sufficient remaining disk space (29457645568 B)
[2025-12-13 16:20:29] 2025-12-13 21:19:59,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:20:29] 2025-12-13 21:19:59,223 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:20:29] 2025-12-13 21:19:59,223 | INFO     | update_server=False
[2025-12-13 16:20:29] 2025-12-13 21:19:59,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:20:29] 2025-12-13 21:19:59,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:20:29] 2025-12-13 21:19:59,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:20:29] 2025-12-13 21:19:59,388 | INFO     | all payload control threads have been joined
[2025-12-13 16:20:29] 2025-12-13 21:19:59,471 | INFO     | all job control threads have been joined
[2025-12-13 16:20:29] 2025-12-13 21:19:59,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:20:29] 2025-12-13 21:20:00,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:20:29] 2025-12-13 21:20:00,038 | INFO     | aborting loop
[2025-12-13 16:20:29] 2025-12-13 21:20:00,123 | INFO     | all data control threads have been joined
[2025-12-13 16:20:29] 2025-12-13 21:20:00,229 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,229 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,335 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,335 | INFO     | [job] validate thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,393 | INFO     | [payload] control thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,477 | INFO     | [job] control thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,663 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,799 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,819 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,826 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:00,901 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:01,044 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:01,129 | INFO     | [data] control thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:01,283 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:03,346 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:20:29] 2025-12-13 21:20:04,005 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:09,517 | INFO     | job.realtimelogging is not enabled
[2025-12-13 16:20:29] 2025-12-13 21:20:10,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:20:29] 2025-12-13 21:20:10,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447014983488)>', '<ExcThread(monitor, started 140445766121216)>']
[2025-12-13 16:20:29] 2025-12-13 21:20:15,709 | INFO     | all workflow threads have been joined
[2025-12-13 16:20:29] 2025-12-13 21:20:15,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:20:29] 2025-12-13 21:20:15,710 | INFO     | traces error code: 0
[2025-12-13 16:20:29] 2025-12-13 21:20:15,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:20:29] 2025-12-13 21:20:28,846 | INFO     | PID=28109 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:20:29] 2025-12-13 21:20:28,847 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:20:29] 2025-12-13 21:20:28,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:20:29] 2025-12-13 21:20:28,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:20:29] 2025-12-13 21:20:28,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:20:29] 2025-12-13 21:20:28,847 | INFO     | [monitor] control thread has ended
[2025-12-13 16:20:29] 2025-12-13 21:20:28,937 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:20:29] 2025-12-13 21:20:28,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:20:29] 2025-12-13 21:20:28,944 [wrapper] pilotpid: 28109
[2025-12-13 16:20:29] 2025-12-13 21:20:28,947 [wrapper] Pilot exit status: 0
[2025-12-13 16:20:29] 2025-12-13 21:20:28,961 [wrapper] pandaids: 6929310136
[2025-12-13 16:20:29] 2025-12-13 21:20:29,001 [wrapper] cleanup supervisor_pilot 29930 28110
[2025-12-13 16:20:29] 2025-12-13 21:20:29,006 [wrapper] Test setup, not cleaning
[2025-12-13 16:20:29] 2025-12-13 21:20:29,009 [wrapper] apfmon messages muted
[2025-12-13 16:20:29] 2025-12-13 21:20:29,013 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:20:29] 2025-12-13 21:20:29,016 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:20:29]  *** Error codes and diagnostics ***
[2025-12-13 16:20:29]     "exeErrorCode": 0,
[2025-12-13 16:20:29]     "exeErrorDiag": "",
[2025-12-13 16:20:29]     "pilotErrorCode": 0,
[2025-12-13 16:20:29]     "pilotErrorDiag": "",
[2025-12-13 16:20:29]  *** Listing of results directory ***
[2025-12-13 16:20:29] total 339524
[2025-12-13 16:20:29] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas       100 Dec 13 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:20:29] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 15:00 run_atlas
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas       105 Dec 13 15:00 job.xml
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas 188851883 Dec 13 15:00 EVNT.47886829._000197.pool.root.1
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:00 start_atlas.sh
[2025-12-13 16:20:29] drwxrwx--x 2 boincer umatlas      4096 Dec 13 15:00 shared
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas    592408 Dec 13 15:00 input.tar.gz
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas         0 Dec 13 15:00 boinc_lockfile
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas      2535 Dec 13 15:00 pandaJob.out
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas        57 Dec 13 15:00 setup.sh.local
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas    991736 Dec 13 15:00 agis_schedconf.cvmfs.json
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas   1516240 Dec 13 15:00 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:20:29] drwx------ 5 boincer umatlas      4096 Dec 13 15:00 pilot3
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas 152795886 Dec 13 16:19 HITS.47886831._004909.pool.root.1
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 16:19 init_data.xml
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas      1044 Dec 13 16:19 memory_monitor_summary.json
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas    372408 Dec 13 16:19 log.47886831._004909.job.log.tgz.1
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas       529 Dec 13 16:19 boinc_task_state.xml
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas      7839 Dec 13 16:19 heartbeat.json
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas        27 Dec 13 16:20 wrapper_checkpoint.txt
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 16:20 boinc_mmap_file
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas       745 Dec 13 16:20 pilotlog.txt
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas        95 Dec 13 16:20 pilot_heartbeat.json
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas    683840 Dec 13 16:20 log.47886831._004909.job.log.1
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas       357 Dec 13 16:20 output.list
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas       620 Dec 13 16:20 runtime_log
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas   1075200 Dec 13 16:20 result.tar.gz
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas      9344 Dec 13 16:20 runtime_log.err
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas       659 Dec 13 16:20 0sGODmT7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7TPKDmJSpOhn.diag
[2025-12-13 16:20:29] -rw-r--r-- 1 boincer umatlas     22327 Dec 13 16:20 stderr.txt
[2025-12-13 16:20:29] HITS file was successfully produced:
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas 152795886 Dec 13 16:19 shared/HITS.pool.root.1
[2025-12-13 16:20:29]  *** Contents of shared directory: ***
[2025-12-13 16:20:29] total 335296
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas 188851883 Dec 13 15:00 ATLAS.root_0
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 15:00 start_atlas.sh
[2025-12-13 16:20:29] -rw-r--r-- 2 boincer umatlas    592408 Dec 13 15:00 input.tar.gz
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas 152795886 Dec 13 16:19 HITS.pool.root.1
[2025-12-13 16:20:29] -rw------- 1 boincer umatlas   1075200 Dec 13 16:20 result.tar.gz
16:20:30 (23953): run_atlas exited; CPU time 50420.932713
16:20:30 (23953): called boinc_finish(0)

</stderr_txt>
]]>

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