Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:42:14 (23552): wrapper (7.7.26015): starting
14:42:14 (23552): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 14:42:14] Arguments: --nthreads 8
[2025-12-13 14:42:14] Threads: 8
[2025-12-13 14:42:14] Checking for CVMFS
[2025-12-13 14:42:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:42:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:42:15] 2.11.2.0 2895 98213 95844 153971 3 59 18548236 20275200 1 130560 0 28605351 99.850 6554178 33172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 14:42:15] CVMFS is ok
[2025-12-13 14:42:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:42:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:42:15] Further information can be found at the LHC@home message board.
[2025-12-13 14:42:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:42:15] Checking for apptainer binary...
[2025-12-13 14:42:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:42:15] Running /usr/bin/apptainer --version
[2025-12-13 14:42:15] apptainer version 1.3.2-1.el7
[2025-12-13 14:42:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:42:17] c-204-7.aglt2.org
[2025-12-13 14:42:17] apptainer works
[2025-12-13 14:42:17] Set ATHENA_PROC_NUMBER=8
[2025-12-13 14:42:17] Set ATHENA_CORE_NUMBER=8
[2025-12-13 14:42:17] Starting ATLAS job with PandaID=6929400866
[2025-12-13 14:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:47:52]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:47:52] 2025-12-13 21:47:08,871 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 16:47:52] 2025-12-13 21:47:09,878 | INFO     | time since job start (7475s) is within the limit (174528.0s)
[2025-12-13 16:47:52] 2025-12-13 21:47:10,830 | INFO     | monitor loop #552: job 0:6929400866 is in state 'finished'
[2025-12-13 16:47:52] 2025-12-13 21:47:10,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:47:52] 2025-12-13 21:47:11,002 | INFO     | PID=27233 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:47:52] 2025-12-13 21:47:12,002 | INFO     | time since job start (7478s) is within the limit (174528.0s)
[2025-12-13 16:47:52] 2025-12-13 21:47:13,333 | INFO     | monitor loop #553: job 0:6929400866 is in state 'finished'
[2025-12-13 16:47:52] 2025-12-13 21:47:13,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,008 | INFO     | time since job start (7480s) is within the limit (174528.0s)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,466 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 16:47:52] 2025-12-13 21:47:14,468 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1596.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,470 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929400866/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,470 | INFO     | extracted standard info from prmon json
[2025-12-13 16:47:52] 2025-12-13 21:47:14,470 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:47:52] 2025-12-13 21:47:14,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:47:52] 2025-12-13 21:47:14,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:47:52] 2025-12-13 21:47:14,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:47:52] 2025-12-13 21:47:14,474 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:47:52] 2025-12-13 21:47:14,474 | INFO     | sum of square deviations: 563026370.5
[2025-12-13 16:47:52] 2025-12-13 21:47:14,475 | INFO     | sum of deviations: 1987856501.5000021
[2025-12-13 16:47:52] 2025-12-13 21:47:14,475 | INFO     | mean x: 1765658675.5
[2025-12-13 16:47:52] 2025-12-13 21:47:14,475 | INFO     | mean y: 2521438.9590163934
[2025-12-13 16:47:52] 2025-12-13 21:47:14,475 | INFO     | intersect: -6231424716.006309
[2025-12-13 16:47:52] 2025-12-13 21:47:14,475 | INFO     | chi2: 1.635225435346894
[2025-12-13 16:47:52] 2025-12-13 21:47:14,476 | INFO     | sum of square deviations: 496597218.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,476 | INFO     | sum of deviations: 2075409832.0000002
[2025-12-13 16:47:52] 2025-12-13 21:47:14,476 | INFO     | mean x: 1765658523.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,477 | INFO     | mean y: 2521640.0854700855
[2025-12-13 16:47:52] 2025-12-13 21:47:14,477 | INFO     | intersect: -7376627750.535559
[2025-12-13 16:47:52] 2025-12-13 21:47:14,477 | INFO     | chi2: 1.6367833768400386
[2025-12-13 16:47:52] 2025-12-13 21:47:14,477 | INFO     | current chi2=1.6367833768400386 (change=-0.09527380503435531 %)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,477 | INFO     | right removable region: 116
[2025-12-13 16:47:52] 2025-12-13 21:47:14,478 | INFO     | sum of square deviations: 496597218.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,478 | INFO     | sum of deviations: -16567632391.000002
[2025-12-13 16:47:52] 2025-12-13 21:47:14,478 | INFO     | mean x: 1765658828.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,478 | INFO     | mean y: 2563234.623931624
[2025-12-13 16:47:52] 2025-12-13 21:47:14,479 | INFO     | intersect: 58909027729.21137
[2025-12-13 16:47:52] 2025-12-13 21:47:14,479 | INFO     | chi2: 0.12284187994382495
[2025-12-13 16:47:52] 2025-12-13 21:47:14,479 | INFO     | current chi2=0.12284187994382495 (change=92.48777096487828 %)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,479 | INFO     | sum of square deviations: 435610028.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,480 | INFO     | sum of deviations: -14647984442.5
[2025-12-13 16:47:52] 2025-12-13 21:47:14,480 | INFO     | mean x: 1765658980.5
[2025-12-13 16:47:52] 2025-12-13 21:47:14,480 | INFO     | mean y: 2558319.276785714
[2025-12-13 16:47:52] 2025-12-13 21:47:14,480 | INFO     | intersect: 59375262377.238495
[2025-12-13 16:47:52] 2025-12-13 21:47:14,481 | INFO     | chi2: 0.11076970657223656
[2025-12-13 16:47:52] 2025-12-13 21:47:14,481 | INFO     | current chi2=0.11076970657223656 (change=9.827408516630436 %)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,481 | INFO     | left removable region: 20
[2025-12-13 16:47:52] 2025-12-13 21:47:14,481 | INFO     | sum of square deviations: 274312120.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | sum of deviations: -6935130748.0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | mean x: 1765659102.5
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | mean y: 2538536.2916666665
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | intersect: 44641750001.80706
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | chi2: 0.08393411175712234
[2025-12-13 16:47:52] 2025-12-13 21:47:14,482 | INFO     | current memory leak: -25.28 B/s (using 96 data points, chi2=0.08)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | could have reported an average CPU frequency of 1937 MHz (8 samples)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | ..............................
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | . Timing measurements:
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | . get job = 0 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | . initial setup = 2 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,483 | INFO     | . payload setup = 8 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,484 | INFO     | . stage-in = 0 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,484 | INFO     | . payload execution = 7440 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,484 | INFO     | . stage-out = 0 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,484 | INFO     | . log creation = 0 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,484 | INFO     | ..............................
[2025-12-13 16:47:52] 2025-12-13 21:47:14,897 | INFO     | 
[2025-12-13 16:47:52] 2025-12-13 21:47:14,897 | INFO     | job summary report
[2025-12-13 16:47:52] 2025-12-13 21:47:14,897 | INFO     | --------------------------------------------------
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | PanDA job id: 6929400866
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | task id: 47899042
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | errors: (none)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | pilot state: finished 
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | transexitcode: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,898 | INFO     | exeerrorcode: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | exeerrordiag: 
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | exitcode: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | exitmsg: OK
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | cpuconsumptiontime: 55861 s
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | nevents: 400
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | neventsw: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | pid: 1159
[2025-12-13 16:47:52] 2025-12-13 21:47:14,899 | INFO     | pgrp: 1159
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | corecount: 8
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | event service: False
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | sizes: {0: 2283104, 1: 2283960, 7: 2284222, 12: 2284250, 7453: 2311621, 7454: 2320619, 7457: 2320803, 7464: 2320997}
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | --------------------------------------------------
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | 
[2025-12-13 16:47:52] 2025-12-13 21:47:14,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 16:47:52] 2025-12-13 21:47:14,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | job 6929400866 has completed (purged errors)
[2025-12-13 16:47:52] 2025-12-13 21:47:14,931 | INFO     | overall cleanup function is called
[2025-12-13 16:47:52] 2025-12-13 21:47:15,939 | INFO     | --- collectZombieJob: --- 10, [1159]
[2025-12-13 16:47:52] 2025-12-13 21:47:15,939 | INFO     | zombie collector waiting for pid 1159
[2025-12-13 16:47:52] 2025-12-13 21:47:15,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:47:52] 2025-12-13 21:47:15,940 | INFO     | collected zombie processes
[2025-12-13 16:47:52] 2025-12-13 21:47:15,940 | INFO     | will attempt to kill all subprocesses of pid=1159
[2025-12-13 16:47:52] 2025-12-13 21:47:16,035 | INFO     | process IDs to be killed: [1159] (in reverse order)
[2025-12-13 16:47:52] 2025-12-13 21:47:16,098 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:47:52] 2025-12-13 21:47:16,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:47:52] 2025-12-13 21:47:16,102 | INFO     | did not find any defunct processes belonging to 1159
[2025-12-13 16:47:52] 2025-12-13 21:47:16,105 | INFO     | did not find any defunct processes belonging to 1159
[2025-12-13 16:47:52] 2025-12-13 21:47:16,105 | INFO     | ready for new job
[2025-12-13 16:47:52] 2025-12-13 21:47:16,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:47:52] 2025-12-13 21:47:16,107 | INFO     | ***************************************
[2025-12-13 16:47:52] 2025-12-13 21:47:16,107 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:47:52] 2025-12-13 21:47:16,107 | INFO     | ***************************************
[2025-12-13 16:47:52] 2025-12-13 21:47:16,107 | INFO     | 
[2025-12-13 16:47:52] 2025-12-13 21:47:16,108 | INFO     | architecture information:
[2025-12-13 16:47:52] 2025-12-13 21:47:16,108 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:47:52] 2025-12-13 21:47:16,125 | INFO     | cat /etc/os-release:
[2025-12-13 16:47:52] NAME="CentOS Linux"
[2025-12-13 16:47:52] VERSION="7 (Core)"
[2025-12-13 16:47:52] ID="centos"
[2025-12-13 16:47:52] ID_LIKE="rhel fedora"
[2025-12-13 16:47:52] VERSION_ID="7"
[2025-12-13 16:47:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:47:52] ANSI_COLOR="0;31"
[2025-12-13 16:47:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:47:52] HOME_URL="https://www.centos.org/"
[2025-12-13 16:47:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:47:52] 
[2025-12-13 16:47:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:47:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:47:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:47:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:47:52] 
[2025-12-13 16:47:52] 2025-12-13 21:47:16,126 | INFO     | ***************************************
[2025-12-13 16:47:52] 2025-12-13 21:47:16,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 16:47:52] 2025-12-13 21:47:16,646 | INFO     | sufficient remaining disk space (18642632704 B)
[2025-12-13 16:47:52] 2025-12-13 21:47:16,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:47:52] 2025-12-13 21:47:16,646 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:47:52] 2025-12-13 21:47:16,647 | INFO     | update_server=False
[2025-12-13 16:47:52] 2025-12-13 21:47:16,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:47:52] 2025-12-13 21:47:16,651 | INFO     | all data control threads have been joined
[2025-12-13 16:47:52] 2025-12-13 21:47:16,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:47:52] 2025-12-13 21:47:16,837 | INFO     | aborting loop
[2025-12-13 16:47:52] 2025-12-13 21:47:17,217 | INFO     | all payload control threads have been joined
[2025-12-13 16:47:52] 2025-12-13 21:47:17,648 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:17,654 | INFO     | [data] control thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:17,704 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:17,746 | INFO     | all job control threads have been joined
[2025-12-13 16:47:52] 2025-12-13 21:47:17,843 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:47:52] 2025-12-13 21:47:18,020 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,027 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,157 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,223 | INFO     | [payload] control thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:47:52] 2025-12-13 21:47:18,751 | INFO     | [job] control thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,984 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:18,987 | INFO     | [job] validate thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:19,145 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:19,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:47:52] 2025-12-13 21:47:20,014 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:20,596 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:22,553 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:27,145 | INFO     | job.realtimelogging is not enabled
[2025-12-13 16:47:52] 2025-12-13 21:47:28,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:47:52] 2025-12-13 21:47:46,008 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:47:52] 2025-12-13 21:47:47,235 | INFO     | PID=27233 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:47:52] 2025-12-13 21:47:47,236 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:47:52] 2025-12-13 21:47:47,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:47:52] 2025-12-13 21:47:47,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:47:52] 2025-12-13 21:47:47,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830094464832)>', '<ExcThread(monitor, started 139829253740288)>']
[2025-12-13 16:47:52] 2025-12-13 21:47:48,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:47:52] 2025-12-13 21:47:48,241 | INFO     | [monitor] control thread has ended
[2025-12-13 16:47:52] 2025-12-13 21:47:52,462 | INFO     | all workflow threads have been joined
[2025-12-13 16:47:52] 2025-12-13 21:47:52,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:47:52] 2025-12-13 21:47:52,463 | INFO     | traces error code: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:52,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:47:52] 2025-12-13 21:47:52,568 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:47:52] 2025-12-13 21:47:52,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:47:52] 2025-12-13 21:47:52,576 [wrapper] pilotpid: 27233
[2025-12-13 16:47:52] 2025-12-13 21:47:52,580 [wrapper] Pilot exit status: 0
[2025-12-13 16:47:52] 2025-12-13 21:47:52,597 [wrapper] pandaids: 6929400866
[2025-12-13 16:47:52] 2025-12-13 21:47:52,644 [wrapper] cleanup supervisor_pilot 22306 27234
[2025-12-13 16:47:52] 2025-12-13 21:47:52,649 [wrapper] Test setup, not cleaning
[2025-12-13 16:47:52] 2025-12-13 21:47:52,654 [wrapper] apfmon messages muted
[2025-12-13 16:47:52] 2025-12-13 21:47:52,658 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:47:52] 2025-12-13 21:47:52,663 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:47:52]  *** Error codes and diagnostics ***
[2025-12-13 16:47:52]     "exeErrorCode": 0,
[2025-12-13 16:47:52]     "exeErrorDiag": "",
[2025-12-13 16:47:52]     "pilotErrorCode": 0,
[2025-12-13 16:47:52]     "pilotErrorDiag": "",
[2025-12-13 16:47:52]  *** Listing of results directory ***
[2025-12-13 16:47:52] total 373080
[2025-12-13 16:47:52] -rwx------ 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas       100 Dec 13 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:47:52] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 14:42 run_atlas
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas       105 Dec 13 14:42 job.xml
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas 194688880 Dec 13 14:42 EVNT.47899040._000029.pool.root.1
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:42 start_atlas.sh
[2025-12-13 16:47:52] drwxrwx--x 2 boincer umatlas      4096 Dec 13 14:42 shared
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas    592385 Dec 13 14:42 input.tar.gz
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas         0 Dec 13 14:42 boinc_lockfile
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas      2491 Dec 13 14:42 pandaJob.out
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas        57 Dec 13 14:42 setup.sh.local
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas    991736 Dec 13 14:42 agis_schedconf.cvmfs.json
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas   1516240 Dec 13 14:42 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:47:52] drwx------ 5 boincer umatlas      4096 Dec 13 14:42 pilot3
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas      5909 Dec 13 16:41 init_data.xml
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas 180603987 Dec 13 16:46 HITS.47899042._000707.pool.root.1
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas       530 Dec 13 16:46 boinc_task_state.xml
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas      1048 Dec 13 16:47 memory_monitor_summary.json
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas    358205 Dec 13 16:47 log.47899042._000707.job.log.tgz.1
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas      7836 Dec 13 16:47 heartbeat.json
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 16:47 boinc_mmap_file
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas        27 Dec 13 16:47 wrapper_checkpoint.txt
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas        95 Dec 13 16:47 pilot_heartbeat.json
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas      4818 Dec 13 16:47 pilotlog.txt
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas   1053157 Dec 13 16:47 log.47899042._000707.job.log.1
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas       357 Dec 13 16:47 output.list
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas       620 Dec 13 16:47 runtime_log
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas   1433600 Dec 13 16:47 result.tar.gz
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas       658 Dec 13 16:47 WrkNDmQ7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaaTKDml5qAEm.diag
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas      9337 Dec 13 16:47 runtime_log.err
[2025-12-13 16:47:52] -rw-r--r-- 1 boincer umatlas     21465 Dec 13 16:47 stderr.txt
[2025-12-13 16:47:52] HITS file was successfully produced:
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas 180603987 Dec 13 16:46 shared/HITS.pool.root.1
[2025-12-13 16:47:52]  *** Contents of shared directory: ***
[2025-12-13 16:47:52] total 368496
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas 194688880 Dec 13 14:42 ATLAS.root_0
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:42 start_atlas.sh
[2025-12-13 16:47:52] -rw-r--r-- 2 boincer umatlas    592385 Dec 13 14:42 input.tar.gz
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas 180603987 Dec 13 16:46 HITS.pool.root.1
[2025-12-13 16:47:52] -rw------- 1 boincer umatlas   1433600 Dec 13 16:47 result.tar.gz
16:47:54 (23552): run_atlas exited; CPU time 55812.741970
16:47:54 (23552): called boinc_finish(0)

</stderr_txt>
]]>

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