Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:50 (3321532): wrapper (7.7.26015): starting
15:01:50 (3321532): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 15:01:50] Arguments: --nthreads 9
[2025-12-13 15:01:50] Threads: 9
[2025-12-13 15:01:50] Checking for CVMFS
[2025-12-13 15:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:01:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:01:51] 2.13.3.0 11460 54984 230344 153971 0 765 30884824 32935937 33832 16776704 0 625836127 99.670 512233081 34084 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 15:01:51] CVMFS is ok
[2025-12-13 15:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:01:51] Further information can be found at the LHC@home message board.
[2025-12-13 15:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:01:51] Checking for apptainer binary...
[2025-12-13 15:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:01:51] Running /usr/bin/apptainer --version
[2025-12-13 15:01:51] apptainer version 1.4.5-2.el9
[2025-12-13 15:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:01:51] c7-3-34.aglt2.org
[2025-12-13 15:01:51] apptainer works
[2025-12-13 15:01:51] Set ATHENA_PROC_NUMBER=9
[2025-12-13 15:01:51] Set ATHENA_CORE_NUMBER=9
[2025-12-13 15:01:51] Starting ATLAS job with PandaID=6929219401
[2025-12-13 15:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:52:46]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:52:46] 2025-12-13 23:51:38,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 18:52:46] 2025-12-13 23:51:38,894 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3115.8373229166677
[2025-12-13 18:52:46] 2025-12-13 23:51:38,940 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929219401/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,941 | INFO     | extracted standard info from prmon json
[2025-12-13 18:52:46] 2025-12-13 23:51:38,941 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:52:46] 2025-12-13 23:51:38,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:52:46] 2025-12-13 23:51:38,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:52:46] 2025-12-13 23:51:38,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:52:46] 2025-12-13 23:51:38,945 | INFO     | fitting pss+swap vs Time
[2025-12-13 18:52:46] 2025-12-13 23:51:38,948 | INFO     | sum of square deviations: 3531989306.9600153
[2025-12-13 18:52:46] 2025-12-13 23:51:38,950 | INFO     | sum of deviations: 18597781584.626667
[2025-12-13 18:52:46] 2025-12-13 23:51:38,952 | INFO     | mean x: 1765663012.0133333
[2025-12-13 18:52:46] 2025-12-13 23:51:38,952 | INFO     | mean y: 2527673.4577777777
[2025-12-13 18:52:46] 2025-12-13 23:51:38,952 | INFO     | intersect: -9294616852.084743
[2025-12-13 18:52:46] 2025-12-13 23:51:38,952 | INFO     | chi2: 2.1493839167396587
[2025-12-13 18:52:46] 2025-12-13 23:51:38,953 | INFO     | sum of square deviations: 3301716136.9590855
[2025-12-13 18:52:46] 2025-12-13 23:51:38,956 | INFO     | sum of deviations: 32248383902.74544
[2025-12-13 18:52:46] 2025-12-13 23:51:38,956 | INFO     | mean x: 1765662859.5136364
[2025-12-13 18:52:46] 2025-12-13 23:51:38,956 | INFO     | mean y: 2536541.418181818
[2025-12-13 18:52:46] 2025-12-13 23:51:38,956 | INFO     | intersect: -17242971968.24345
[2025-12-13 18:52:46] 2025-12-13 23:51:38,959 | INFO     | chi2: 1.4577537814139712
[2025-12-13 18:52:46] 2025-12-13 23:51:38,959 | INFO     | current chi2=1.4577537814139712 (change=32.178064139179114 %)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,959 | INFO     | sum of square deviations: 3081675716.958148
[2025-12-13 18:52:46] 2025-12-13 23:51:38,960 | INFO     | sum of deviations: 31211140595.660473
[2025-12-13 18:52:46] 2025-12-13 23:51:38,960 | INFO     | mean x: 1765662707.0139534
[2025-12-13 18:52:46] 2025-12-13 23:51:38,964 | INFO     | mean y: 2535822.446511628
[2025-12-13 18:52:46] 2025-12-13 23:51:38,964 | INFO     | intersect: -17880055356.719856
[2025-12-13 18:52:46] 2025-12-13 23:51:38,965 | INFO     | chi2: 1.458570257705644
[2025-12-13 18:52:46] 2025-12-13 23:51:38,965 | INFO     | current chi2=1.458570257705644 (change=-0.05600920416621828 %)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,965 | INFO     | right removable region: 214
[2025-12-13 18:52:46] 2025-12-13 23:51:38,965 | INFO     | sum of square deviations: 3301714306.9590855
[2025-12-13 18:52:46] 2025-12-13 23:51:38,966 | INFO     | sum of deviations: -14942592744.89545
[2025-12-13 18:52:46] 2025-12-13 23:51:38,966 | INFO     | mean x: 1765663164.5136364
[2025-12-13 18:52:46] 2025-12-13 23:51:38,967 | INFO     | mean y: 2549646.131818182
[2025-12-13 18:52:46] 2025-12-13 23:51:38,967 | INFO     | intersect: 7993424427.872148
[2025-12-13 18:52:46] 2025-12-13 23:51:38,967 | INFO     | chi2: 0.7346609312993734
[2025-12-13 18:52:46] 2025-12-13 23:51:38,967 | INFO     | current chi2=0.7346609312993734 (change=65.81992981441117 %)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,967 | INFO     | sum of square deviations: 3081672056.958148
[2025-12-13 18:52:46] 2025-12-13 23:51:38,970 | INFO     | sum of deviations: -10043361775.604652
[2025-12-13 18:52:46] 2025-12-13 23:51:38,971 | INFO     | mean x: 1765663317.0139534
[2025-12-13 18:52:46] 2025-12-13 23:51:38,971 | INFO     | mean y: 2546244.534883721
[2025-12-13 18:52:46] 2025-12-13 23:51:38,971 | INFO     | intersect: 5756953312.816287
[2025-12-13 18:52:46] 2025-12-13 23:51:38,971 | INFO     | chi2: 0.720231703087949
[2025-12-13 18:52:46] 2025-12-13 23:51:38,972 | INFO     | current chi2=0.720231703087949 (change=1.9640663599606125 %)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,972 | INFO     | left removable region: 20
[2025-12-13 18:52:46] 2025-12-13 23:51:38,972 | INFO     | sum of square deviations: 2263991792.453608
[2025-12-13 18:52:46] 2025-12-13 23:51:38,973 | INFO     | sum of deviations: 4295337559.247422
[2025-12-13 18:52:46] 2025-12-13 23:51:38,973 | INFO     | mean x: 1765663286.5154638
[2025-12-13 18:52:46] 2025-12-13 23:51:38,973 | INFO     | mean y: 2554787.9175257734
[2025-12-13 18:52:46] 2025-12-13 23:51:38,973 | INFO     | intersect: -3347333606.922811
[2025-12-13 18:52:46] 2025-12-13 23:51:38,974 | INFO     | chi2: 0.00043362073289790394
[2025-12-13 18:52:46] 2025-12-13 23:51:38,974 | INFO     | current memory leak: 1.90 B/s (using 194 data points, chi2=0.00)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,974 | INFO     | could have reported an average CPU frequency of 3170 MHz (11 samples)
[2025-12-13 18:52:46] 2025-12-13 23:51:38,974 | INFO     | ..............................
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . Timing measurements:
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . get job = 0 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . initial setup = 3 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . payload setup = 15 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . stage-in = 0 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . payload execution = 13693 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . stage-out = 3 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | . log creation = 0 s
[2025-12-13 18:52:46] 2025-12-13 23:51:38,975 | INFO     | ..............................
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | 
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | job summary report
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | --------------------------------------------------
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | PanDA job id: 6929219401
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | task id: 47898836
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | errors: (none)
[2025-12-13 18:52:46] 2025-12-13 23:51:39,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | pilot state: finished 
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | transexitcode: 0
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | exeerrorcode: 0
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | exeerrordiag: 
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | exitcode: 0
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | exitmsg: OK
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | cpuconsumptiontime: 44384 s
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | nevents: 400
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | neventsw: 0
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | pid: 3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | pgrp: 3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | corecount: 9
[2025-12-13 18:52:46] 2025-12-13 23:51:39,187 | INFO     | event service: False
[2025-12-13 18:52:46] 2025-12-13 23:51:39,188 | INFO     | sizes: {0: 2283829, 1: 2284028, 9: 2284290, 11: 2284318, 13712: 2314490, 13716: 2323488, 13719: 2323672, 13743: 2323866}
[2025-12-13 18:52:46] 2025-12-13 23:51:39,188 | INFO     | --------------------------------------------------
[2025-12-13 18:52:46] 2025-12-13 23:51:39,188 | INFO     | 
[2025-12-13 18:52:46] 2025-12-13 23:51:39,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 18:52:46] 2025-12-13 23:51:39,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:52:46] 2025-12-13 23:51:39,240 | INFO     | job 6929219401 has completed (purged errors)
[2025-12-13 18:52:46] 2025-12-13 23:51:39,240 | INFO     | overall cleanup function is called
[2025-12-13 18:52:46] 2025-12-13 23:51:40,250 | INFO     | --- collectZombieJob: --- 10, [3338714]
[2025-12-13 18:52:46] 2025-12-13 23:51:40,250 | INFO     | zombie collector waiting for pid 3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:40,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:52:46] 2025-12-13 23:51:40,251 | INFO     | collected zombie processes
[2025-12-13 18:52:46] 2025-12-13 23:51:40,251 | INFO     | will attempt to kill all subprocesses of pid=3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:41,049 | INFO     | process IDs to be killed: [3338714] (in reverse order)
[2025-12-13 18:52:46] 2025-12-13 23:51:41,442 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:52:46] 2025-12-13 23:51:41,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:52:46] 2025-12-13 23:51:41,469 | INFO     | did not find any defunct processes belonging to 3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:41,513 | INFO     | did not find any defunct processes belonging to 3338714
[2025-12-13 18:52:46] 2025-12-13 23:51:41,513 | INFO     | ready for new job
[2025-12-13 18:52:46] 2025-12-13 23:51:41,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:52:46] 2025-12-13 23:51:41,516 | INFO     | ***************************************
[2025-12-13 18:52:46] 2025-12-13 23:51:41,516 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:52:46] 2025-12-13 23:51:41,516 | INFO     | ***************************************
[2025-12-13 18:52:46] 2025-12-13 23:51:41,516 | INFO     | 
[2025-12-13 18:52:46] 2025-12-13 23:51:41,529 | INFO     | architecture information:
[2025-12-13 18:52:46] 2025-12-13 23:51:41,531 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:52:46] 2025-12-13 23:51:41,625 | INFO     | cat /etc/os-release:
[2025-12-13 18:52:46] NAME="CentOS Linux"
[2025-12-13 18:52:46] VERSION="7 (Core)"
[2025-12-13 18:52:46] ID="centos"
[2025-12-13 18:52:46] ID_LIKE="rhel fedora"
[2025-12-13 18:52:46] VERSION_ID="7"
[2025-12-13 18:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:52:46] ANSI_COLOR="0;31"
[2025-12-13 18:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:52:46] HOME_URL="https://www.centos.org/"
[2025-12-13 18:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:52:46] 
[2025-12-13 18:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:52:46] 
[2025-12-13 18:52:46] 2025-12-13 23:51:41,625 | INFO     | ***************************************
[2025-12-13 18:52:46] 2025-12-13 23:51:42,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 18:52:46] 2025-12-13 23:51:42,184 | INFO     | sufficient remaining disk space (74110205952 B)
[2025-12-13 18:52:46] 2025-12-13 23:51:42,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:52:46] 2025-12-13 23:51:42,187 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:52:46] 2025-12-13 23:51:42,188 | INFO     | update_server=False
[2025-12-13 18:52:46] 2025-12-13 23:51:42,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:52:46] 2025-12-13 23:51:42,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 18:52:46] 2025-12-13 23:51:42,259 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 18:52:46] 2025-12-13 23:51:42,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:52:46] 2025-12-13 23:51:42,259 | INFO     | will abort loop
[2025-12-13 18:52:46] 2025-12-13 23:51:42,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:52:46] 2025-12-13 23:51:42,961 | INFO     | all payload control threads have been joined
[2025-12-13 18:52:46] 2025-12-13 23:51:43,026 | INFO     | all data control threads have been joined
[2025-12-13 18:52:46] 2025-12-13 23:51:43,197 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,263 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,266 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,298 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,647 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:52:46] 2025-12-13 23:51:43,778 | INFO     | [job] validate thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,836 | INFO     | all job control threads have been joined
[2025-12-13 18:52:46] 2025-12-13 23:51:43,884 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:43,967 | INFO     | [payload] control thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,033 | INFO     | [data] control thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:52:46] 2025-12-13 23:51:44,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,364 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,442 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,475 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:44,842 | INFO     | [job] control thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:45,214 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:51:47,716 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:52:46] 2025-12-13 23:52:12,711 | INFO     | PID=3329645 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 18:52:46] 2025-12-13 23:52:12,712 | INFO     | .. there are 42 such processes running
[2025-12-13 18:52:46] 2025-12-13 23:52:12,713 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:52:46] 2025-12-13 23:52:12,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:52:46] 2025-12-13 23:52:12,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:52:46] 2025-12-13 23:52:38,888 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:52:46] 2025-12-13 23:52:40,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993086342976)>', '<ExcThread(monitor, started 139992378636032)>']
[2025-12-13 18:52:46] 2025-12-13 23:52:40,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:52:46] 2025-12-13 23:52:40,884 | INFO     | [monitor] control thread has ended
[2025-12-13 18:52:46] 2025-12-13 23:52:45,667 | INFO     | all workflow threads have been joined
[2025-12-13 18:52:46] 2025-12-13 23:52:45,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:52:46] 2025-12-13 23:52:45,669 | INFO     | traces error code: 0
[2025-12-13 18:52:46] 2025-12-13 23:52:45,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:52:46] 2025-12-13 23:52:46,096 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:52:46] 2025-12-13 23:52:46,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:52:46] 2025-12-13 23:52:46,135 [wrapper] pilotpid: 3329645
[2025-12-13 18:52:46] 2025-12-13 23:52:46,138 [wrapper] Pilot exit status: 0
[2025-12-13 18:52:46] 2025-12-13 23:52:46,176 [wrapper] pandaids: 6929219401
[2025-12-13 18:52:46] 2025-12-13 23:52:46,327 [wrapper] cleanup supervisor_pilot  314013 3329646
[2025-12-13 18:52:46] 2025-12-13 23:52:46,331 [wrapper] Test setup, not cleaning
[2025-12-13 18:52:46] 2025-12-13 23:52:46,334 [wrapper] apfmon messages muted
[2025-12-13 18:52:46] 2025-12-13 23:52:46,337 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:52:46] 2025-12-13 23:52:46,340 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:52:46]  *** Error codes and diagnostics ***
[2025-12-13 18:52:46]     "exeErrorCode": 0,
[2025-12-13 18:52:46]     "exeErrorDiag": "",
[2025-12-13 18:52:46]     "pilotErrorCode": 0,
[2025-12-13 18:52:46]     "pilotErrorDiag": "",
[2025-12-13 18:52:46]  *** Listing of results directory ***
[2025-12-13 18:52:46] total 405512
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 18:52:46] -rwx------. 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas       100 Dec 13 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:52:46] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 15:01 run_atlas
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas       105 Dec 13 15:01 job.xml
[2025-12-13 18:52:46] -rw-r--r--. 2 boincer umatlas 212684793 Dec 13 15:01 EVNT.47898833._000026.pool.root.1
[2025-12-13 18:52:46] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 15:01 start_atlas.sh
[2025-12-13 18:52:46] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 15:01 shared
[2025-12-13 18:52:46] -rw-r--r--. 2 boincer umatlas    592393 Dec 13 15:01 input.tar.gz
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas         0 Dec 13 15:01 boinc_lockfile
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas      2546 Dec 13 15:01 pandaJob.out
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas        57 Dec 13 15:01 setup.sh.local
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas    991736 Dec 13 15:02 agis_schedconf.cvmfs.json
[2025-12-13 18:52:46] drwx------. 5 boincer umatlas      4096 Dec 13 15:02 pilot3
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas      6946 Dec 13 18:45 init_data.xml
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas 194346842 Dec 13 18:50 HITS.47898836._000628.pool.root.1
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas       530 Dec 13 18:50 boinc_task_state.xml
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas      1033 Dec 13 18:51 memory_monitor_summary.json
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas   1516240 Dec 13 18:51 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas    443495 Dec 13 18:51 log.47898836._000628.job.log.tgz.1
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas      7765 Dec 13 18:51 heartbeat.json
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas        95 Dec 13 18:52 pilot_heartbeat.json
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas      5010 Dec 13 18:52 pilotlog.txt
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas        28 Dec 13 18:52 wrapper_checkpoint.txt
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 18:52 boinc_mmap_file
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas   1707573 Dec 13 18:52 log.47898836._000628.job.log.1
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas       357 Dec 13 18:52 output.list
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas       620 Dec 13 18:52 runtime_log
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas   2170880 Dec 13 18:52 result.tar.gz
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas      9338 Dec 13 18:52 runtime_log.err
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas       655 Dec 13 18:52 bRoKDmvTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnJSKDm4uW0Im.diag
[2025-12-13 18:52:46] -rw-r--r--. 1 boincer umatlas     16430 Dec 13 18:52 stderr.txt
[2025-12-13 18:52:46] HITS file was successfully produced:
[2025-12-13 18:52:46] -rw-------. 1 boincer umatlas 194346842 Dec 13 18:50 shared/HITS.pool.root.1
[2025-12-13 18:52:46]  *** Contents of shared directory: ***
[2025-12-13 18:52:47] total 400212
[2025-12-13 18:52:47] -rw-r--r--. 2 boincer umatlas 212684793 Dec 13 15:01 ATLAS.root_0
[2025-12-13 18:52:47] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 15:01 start_atlas.sh
[2025-12-13 18:52:47] -rw-r--r--. 2 boincer umatlas    592393 Dec 13 15:01 input.tar.gz
[2025-12-13 18:52:47] -rw-------. 1 boincer umatlas 194346842 Dec 13 18:50 HITS.pool.root.1
[2025-12-13 18:52:47] -rw-------. 1 boincer umatlas   2170880 Dec 13 18:52 result.tar.gz
18:52:48 (3321532): run_atlas exited; CPU time 45009.329922
18:52:48 (3321532): called boinc_finish(0)

</stderr_txt>
]]>

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