Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:50 (3112062): wrapper (7.7.26015): starting
20:18:50 (3112062): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 20:18:50] Arguments: --nthreads 4
[2025-12-13 20:18:50] Threads: 4
[2025-12-13 20:18:50] Checking for CVMFS
[2025-12-13 20:18:50] No cvmfs_config command found, will try listing directly
[2025-12-13 20:18:50] CVMFS is ok
[2025-12-13 20:18:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:18:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:18:50] Further information can be found at the LHC@home message board.
[2025-12-13 20:18:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:18:50] Checking for apptainer binary...
[2025-12-13 20:18:50] which: no apptainer in ((null))
[2025-12-13 20:18:50] apptainer is not installed, using version from CVMFS
[2025-12-13 20:18:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:18:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-12-13 20:18:50] apptainer works
[2025-12-13 20:18:50] Set ATHENA_PROC_NUMBER=4
[2025-12-13 20:18:50] Set ATHENA_CORE_NUMBER=4
[2025-12-13 20:18:50] Starting ATLAS job with PandaID=6929266281
[2025-12-13 20:18:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 00:27:39]  *** The last 200 lines of the pilot log: ***
[2025-12-14 00:27:39] 2025-12-13 23:25:44,241 | INFO     | PID=3123019 has CPU usage=25.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-14 00:27:39] 2025-12-13 23:25:44,241 | INFO     | .. there are 10 such processes running
[2025-12-14 00:27:39] 2025-12-13 23:25:45,242 | INFO     | time since job start (14798s) is within the limit (174528.0s)
[2025-12-14 00:27:39] 2025-12-13 23:25:45,368 | INFO     | monitor loop #979: job 0:6929266281 is in state 'finished'
[2025-12-14 00:27:39] 2025-12-13 23:25:45,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 00:27:39] 2025-12-13 23:25:47,248 | INFO     | time since job start (14800s) is within the limit (174528.0s)
[2025-12-14 00:27:39] 2025-12-13 23:25:47,872 | INFO     | monitor loop #980: job 0:6929266281 is in state 'finished'
[2025-12-14 00:27:39] 2025-12-13 23:25:47,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 00:27:39] 2025-12-13 23:25:48,993 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 00:27:39] 2025-12-13 23:25:49,013 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2676.0803671875005
[2025-12-14 00:27:39] 2025-12-13 23:25:49,037 | INFO     | using path: /var/lib/boinc/var/slot88/slots/0/PanDA_Pilot-6929266281/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,038 | INFO     | extracted standard info from prmon json
[2025-12-14 00:27:39] 2025-12-13 23:25:49,038 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 00:27:39] 2025-12-13 23:25:49,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 00:27:39] 2025-12-13 23:25:49,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 00:27:39] 2025-12-13 23:25:49,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 00:27:39] 2025-12-13 23:25:49,043 | INFO     | fitting pss+swap vs Time
[2025-12-14 00:27:39] 2025-12-13 23:25:49,043 | INFO     | sum of square deviations: 4394577280.5
[2025-12-14 00:27:39] 2025-12-13 23:25:49,045 | INFO     | sum of deviations: 1072231434.4999963
[2025-12-14 00:27:39] 2025-12-13 23:25:49,045 | INFO     | mean x: 1765660936.5
[2025-12-14 00:27:39] 2025-12-13 23:25:49,045 | INFO     | mean y: 2351127.152892562
[2025-12-14 00:27:39] 2025-12-13 23:25:49,045 | INFO     | intersect: -428451891.64590305
[2025-12-14 00:27:39] 2025-12-13 23:25:49,046 | INFO     | chi2: 1.3817622998577128
[2025-12-14 00:27:39] 2025-12-13 23:25:49,046 | INFO     | sum of square deviations: 4127772278.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,048 | INFO     | sum of deviations: 997597537.9999981
[2025-12-14 00:27:39] 2025-12-13 23:25:49,048 | INFO     | mean x: 1765660784.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,048 | INFO     | mean y: 2351084.464135021
[2025-12-14 00:27:39] 2025-12-13 23:25:49,048 | INFO     | intersect: -424372758.9148884
[2025-12-14 00:27:39] 2025-12-13 23:25:49,048 | INFO     | chi2: 1.38174962018084
[2025-12-14 00:27:39] 2025-12-13 23:25:49,049 | INFO     | current chi2=1.38174962018084 (change=0.0009176453051449 %)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,049 | INFO     | right removable region: 236
[2025-12-14 00:27:39] 2025-12-13 23:25:49,049 | INFO     | sum of square deviations: 4127772278.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | sum of deviations: -29713640216.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | mean x: 1765661089.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | mean y: 2368533.2784810127
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | intersect: 12712424904.740152
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | chi2: 0.05662373489806326
[2025-12-14 00:27:39] 2025-12-13 23:25:49,051 | INFO     | current chi2=0.05662373489806326 (change=95.90206398713484 %)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,052 | INFO     | sum of square deviations: 3871990738.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,053 | INFO     | sum of deviations: -27945761304.499996
[2025-12-14 00:27:39] 2025-12-13 23:25:49,053 | INFO     | mean x: 1765661241.5
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | mean y: 2367475.5905172415
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | intersect: 12745876161.009827
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | chi2: 0.05643959564509829
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | current chi2=0.05643959564509829 (change=0.32519799920733683 %)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | left removable region: 20
[2025-12-14 00:27:39] 2025-12-13 23:25:49,054 | INFO     | sum of square deviations: 3124858590.0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,056 | INFO     | sum of deviations: -21820818800.999996
[2025-12-14 00:27:39] 2025-12-13 23:25:49,056 | INFO     | mean x: 1765661363.5
[2025-12-14 00:27:39] 2025-12-13 23:25:49,056 | INFO     | mean y: 2364125.388888889
[2025-12-14 00:27:39] 2025-12-13 23:25:49,056 | INFO     | intersect: 12331938590.024132
[2025-12-14 00:27:39] 2025-12-13 23:25:49,056 | INFO     | chi2: 0.052926660196947785
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | current memory leak: -6.98 B/s (using 216 data points, chi2=0.05)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | could have reported an average CPU frequency of 2645 MHz (12 samples)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | ..............................
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | . Timing measurements:
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | . get job = 0 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | . initial setup = 1 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,057 | INFO     | . payload setup = 10 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,058 | INFO     | . stage-in = 0 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,058 | INFO     | . payload execution = 14754 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,058 | INFO     | . stage-out = 1 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,058 | INFO     | . log creation = 0 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,058 | INFO     | ..............................
[2025-12-14 00:27:39] 2025-12-13 23:25:49,149 | INFO     | 
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | job summary report
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | --------------------------------------------------
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | PanDA job id: 6929266281
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | task id: 47898763
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | errors: (none)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | pilot state: finished 
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | transexitcode: 0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | exeerrorcode: 0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,150 | INFO     | exeerrordiag: 
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | exitcode: 0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | exitmsg: OK
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | cpuconsumptiontime: 56527 s
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | nevents: 400
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | neventsw: 0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | pid: 3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | pgrp: 3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | corecount: 4
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | event service: False
[2025-12-14 00:27:39] 2025-12-13 23:25:49,151 | INFO     | sizes: {0: 2283964, 8: 2284226, 11: 2284254, 14768: 2315581, 14769: 2315580, 14770: 2324656, 14774: 2324840, 14782: 2325034}
[2025-12-14 00:27:39] 2025-12-13 23:25:49,152 | INFO     | --------------------------------------------------
[2025-12-14 00:27:39] 2025-12-13 23:25:49,152 | INFO     | 
[2025-12-14 00:27:39] 2025-12-13 23:25:49,152 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/0
[2025-12-14 00:27:39] 2025-12-13 23:25:49,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | job 6929266281 has completed (purged errors)
[2025-12-14 00:27:39] 2025-12-13 23:25:49,185 | INFO     | overall cleanup function is called
[2025-12-14 00:27:39] 2025-12-13 23:25:50,195 | INFO     | --- collectZombieJob: --- 10, [3161464]
[2025-12-14 00:27:39] 2025-12-13 23:25:50,196 | INFO     | zombie collector waiting for pid 3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:50,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 00:27:39] 2025-12-13 23:25:50,196 | INFO     | collected zombie processes
[2025-12-14 00:27:39] 2025-12-13 23:25:50,196 | INFO     | will attempt to kill all subprocesses of pid=3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:51,119 | INFO     | process IDs to be killed: [3161464] (in reverse order)
[2025-12-14 00:27:39] 2025-12-13 23:25:51,444 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 00:27:39] 2025-12-13 23:25:51,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 00:27:39] 2025-12-13 23:25:51,482 | INFO     | did not find any defunct processes belonging to 3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:51,518 | INFO     | did not find any defunct processes belonging to 3161464
[2025-12-14 00:27:39] 2025-12-13 23:25:51,518 | INFO     | ready for new job
[2025-12-14 00:27:39] 2025-12-13 23:25:51,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 00:27:39] 2025-12-13 23:25:51,521 | INFO     | ***************************************
[2025-12-14 00:27:39] 2025-12-13 23:25:51,521 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 00:27:39] 2025-12-13 23:25:51,521 | INFO     | ***************************************
[2025-12-14 00:27:39] 2025-12-13 23:25:51,521 | INFO     | 
[2025-12-14 00:27:39] 2025-12-13 23:25:51,530 | INFO     | architecture information:
[2025-12-14 00:27:39] 2025-12-13 23:25:51,530 | INFO     | executing command: cat /etc/os-release
[2025-12-14 00:27:39] 2025-12-13 23:25:51,552 | INFO     | cat /etc/os-release:
[2025-12-14 00:27:39] NAME="CentOS Linux"
[2025-12-14 00:27:39] VERSION="7 (Core)"
[2025-12-14 00:27:39] ID="centos"
[2025-12-14 00:27:39] ID_LIKE="rhel fedora"
[2025-12-14 00:27:39] VERSION_ID="7"
[2025-12-14 00:27:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 00:27:39] ANSI_COLOR="0;31"
[2025-12-14 00:27:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 00:27:39] HOME_URL="https://www.centos.org/"
[2025-12-14 00:27:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 00:27:39] 
[2025-12-14 00:27:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 00:27:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 00:27:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 00:27:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 00:27:39] 
[2025-12-14 00:27:39] 2025-12-13 23:25:51,553 | INFO     | ***************************************
[2025-12-14 00:27:39] 2025-12-13 23:25:52,056 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/0
[2025-12-14 00:27:39] 2025-12-13 23:25:52,083 | INFO     | sufficient remaining disk space (320612597760 B)
[2025-12-14 00:27:39] 2025-12-13 23:25:52,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 00:27:39] 2025-12-13 23:25:52,083 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 00:27:39] 2025-12-13 23:25:52,083 | INFO     | update_server=False
[2025-12-14 00:27:39] 2025-12-13 23:25:52,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 00:27:39] 2025-12-13 23:25:52,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 00:27:39] 2025-12-13 23:25:52,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:27:39] 2025-12-13 23:25:52,085 | INFO     | aborting loop
[2025-12-14 00:27:39] 2025-12-13 23:25:52,429 | INFO     | all data control threads have been joined
[2025-12-14 00:27:39] 2025-12-13 23:25:52,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 00:27:39] 2025-12-13 23:25:53,088 | INFO     | [job] retrieve thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,090 | INFO     | [job] job monitor thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,094 | INFO     | all job control threads have been joined
[2025-12-14 00:27:39] 2025-12-13 23:25:53,298 | INFO     | [job] validate thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,434 | INFO     | [data] control thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,455 | INFO     | all payload control threads have been joined
[2025-12-14 00:27:39] 2025-12-13 23:25:53,655 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,808 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:53,948 | INFO     | [data] copytool_in thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,099 | INFO     | [job] control thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,145 | INFO     | [payload] validate_post thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:27:39] 2025-12-13 23:25:54,460 | INFO     | [payload] control thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,462 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,584 | INFO     | [payload] failed_post thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:54,961 | INFO     | [data] copytool_out thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:55,165 | INFO     | [job] queue monitor thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:25:56,090 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:26:02,661 | INFO     | job.realtimelogging is not enabled
[2025-12-14 00:27:39] 2025-12-13 23:26:03,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 00:27:39] 2025-12-13 23:26:21,451 | INFO     | PID=3123019 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 00:27:39] 2025-12-13 23:26:21,451 | INFO     | .. there are 10 such processes running
[2025-12-14 00:27:39] 2025-12-13 23:26:21,451 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 00:27:39] 2025-12-13 23:26:21,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 00:27:39] 2025-12-13 23:26:21,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 00:27:39] 2025-12-13 23:26:31,577 | INFO     | [monitor] cgroup control has ended
[2025-12-14 00:27:39] 2025-12-13 23:26:33,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23043616556864)>', '<ExcThread(monitor, started 23043382417152)>']
[2025-12-14 00:27:39] 2025-12-13 23:26:34,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 00:27:39] 2025-12-13 23:26:34,516 | INFO     | [monitor] control thread has ended
[2025-12-14 00:27:39] 2025-12-13 23:26:38,694 | INFO     | all workflow threads have been joined
[2025-12-14 00:27:39] 2025-12-13 23:26:38,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 00:27:39] 2025-12-13 23:26:38,695 | INFO     | traces error code: 0
[2025-12-14 00:27:39] 2025-12-13 23:26:38,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 00:27:39] 2025-12-13 23:26:38,848 [wrapper] ==== pilot stdout END ====
[2025-12-14 00:27:39] 2025-12-13 23:26:38,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 00:27:39] 2025-12-13 23:26:38,861 [wrapper] pilotpid: 3123019
[2025-12-14 00:27:39] 2025-12-13 23:26:38,866 [wrapper] Pilot exit status: 0
[2025-12-14 00:27:39] 2025-12-13 23:26:38,884 [wrapper] pandaids: 6929266281
[2025-12-14 00:27:39] 2025-12-13 23:26:39,130 [wrapper] cleanup supervisor_pilot 3795547 3123021
[2025-12-14 00:27:39] 2025-12-13 23:26:39,135 [wrapper] Test setup, not cleaning
[2025-12-14 00:27:39] 2025-12-13 23:26:39,139 [wrapper] apfmon messages muted
[2025-12-14 00:27:39] 2025-12-13 23:26:39,144 [wrapper] ==== wrapper stdout END ====
[2025-12-14 00:27:39] 2025-12-13 23:26:39,148 [wrapper] ==== wrapper stderr END ====
[2025-12-14 00:27:39]  *** Error codes and diagnostics ***
[2025-12-14 00:27:39]     "exeErrorCode": 0,
[2025-12-14 00:27:39]     "exeErrorDiag": "",
[2025-12-14 00:27:39]     "pilotErrorCode": 0,
[2025-12-14 00:27:39]     "pilotErrorDiag": "",
[2025-12-14 00:27:39]  *** Listing of results directory ***
[2025-12-14 00:27:39] total 444520
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc    579449 Dec 13 11:01 pilot3.tar.gz
[2025-12-14 00:27:39] -rwx------. 1 boinc boinc     36322 Dec 13 11:03 runpilot2-wrapper.sh
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc      5112 Dec 13 11:03 queuedata.json
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc       100 Dec 13 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 00:27:39] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 20:18 run_atlas
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc       105 Dec 13 20:18 job.xml
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc      6682 Dec 13 20:18 init_data.xml
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc 225940827 Dec 13 20:18 EVNT.47898761._000127.pool.root.1
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:18 start_atlas.sh
[2025-12-14 00:27:39] drwxrwx--x. 2 boinc boinc      4096 Dec 13 20:18 shared
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc    592393 Dec 13 20:18 input.tar.gz
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc         0 Dec 13 20:18 boinc_lockfile
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc      2505 Dec 13 20:18 pandaJob.out
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc    991736 Dec 13 20:19 agis_schedconf.cvmfs.json
[2025-12-14 00:27:39] drwx------. 5 boinc boinc      4096 Dec 13 20:19 pilot3
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc 220485722 Dec 14 00:24 HITS.47898763._002540.pool.root.1
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc       528 Dec 14 00:25 boinc_task_state.xml
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc      1033 Dec 14 00:25 memory_monitor_summary.json
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc   1516240 Dec 14 00:25 agis_ddmendpoints.agis.ALL.json
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc        95 Dec 14 00:25 pilot_heartbeat.json
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc    410014 Dec 14 00:25 log.47898763._002540.job.log.tgz.1
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc      7790 Dec 14 00:25 heartbeat.json
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc      4906 Dec 14 00:26 pilotlog.txt
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc   2013008 Dec 14 00:26 log.47898763._002540.job.log.1
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc       357 Dec 14 00:26 output.list
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc       620 Dec 14 00:26 runtime_log
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc   2437120 Dec 14 00:26 result.tar.gz
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc      9206 Dec 14 00:26 runtime_log.err
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc       666 Dec 14 00:26 JrzMDmzdbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbiOKDmQZDSQo.diag
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc        26 Dec 14 00:27 wrapper_checkpoint.txt
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc      8192 Dec 14 00:27 boinc_mmap_file
[2025-12-14 00:27:39] -rw-r--r--. 1 boinc boinc     21185 Dec 14 00:27 stderr.txt
[2025-12-14 00:27:39] HITS file was successfully produced:
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc 220485722 Dec 14 00:24 shared/HITS.pool.root.1
[2025-12-14 00:27:39]  *** Contents of shared directory: ***
[2025-12-14 00:27:39] total 438952
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc 225940827 Dec 13 20:18 ATLAS.root_0
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:18 start_atlas.sh
[2025-12-14 00:27:39] -rw-r--r--. 2 boinc boinc    592393 Dec 13 20:18 input.tar.gz
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc 220485722 Dec 14 00:24 HITS.pool.root.1
[2025-12-14 00:27:39] -rw-------. 1 boinc boinc   2437120 Dec 14 00:26 result.tar.gz
00:27:40 (3112062): run_atlas exited; CPU time 57601.604946
00:27:40 (3112062): called boinc_finish(0)

</stderr_txt>
]]>

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