Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:16:09 (23288): wrapper (7.7.26015): starting
14:16:09 (23288): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 14:16:09] Arguments: --nthreads 8
[2025-12-13 14:16:09] Threads: 8
[2025-12-13 14:16:09] Checking for CVMFS
[2025-12-13 14:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:16:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:16:10] 2.11.2.0 2787 186439 87804 153970 0 56 14768537 20275200 1 130560 2 72000761 99.945 8218294 24883 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 14:16:10] CVMFS is ok
[2025-12-13 14:16:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:16:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:16:10] Further information can be found at the LHC@home message board.
[2025-12-13 14:16:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:16:10] Checking for apptainer binary...
[2025-12-13 14:16:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:16:10] Running /usr/bin/apptainer --version
[2025-12-13 14:16:10] apptainer version 1.3.2-1.el7
[2025-12-13 14:16:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:16:11] c-115-2.aglt2.org
[2025-12-13 14:16:11] apptainer works
[2025-12-13 14:16:11] Set ATHENA_PROC_NUMBER=8
[2025-12-13 14:16:11] Set ATHENA_CORE_NUMBER=8
[2025-12-13 14:16:11] Starting ATLAS job with PandaID=6929266024
[2025-12-13 14:16:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:55:04]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:55:04] 2025-12-13 21:54:25,831 | INFO     | executing command: lscpu
[2025-12-13 16:55:04] 2025-12-13 21:54:25,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 16:55:04] 2025-12-13 21:54:26,500 | INFO     | time since job start (9478s) is within the limit (174528.0s)
[2025-12-13 16:55:04] 2025-12-13 21:54:28,506 | INFO     | time since job start (9480s) is within the limit (174528.0s)
[2025-12-13 16:55:04] 2025-12-13 21:54:29,049 | WARNING  | process 979 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 16:55:04] 2025-12-13 21:54:29,049 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929266024/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:55:04] 2025-12-13 21:54:29,132 | INFO     | number of running child processes to parent process 979: 1
[2025-12-13 16:55:04] 2025-12-13 21:54:29,132 | INFO     | maximum number of monitored processes: 6
[2025-12-13 16:55:04] 2025-12-13 21:54:29,619 | INFO     | PID=26987 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:55:04] 2025-12-13 21:54:30,620 | INFO     | time since job start (9482s) is within the limit (174528.0s)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,329 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 16:55:04] 2025-12-13 21:54:31,332 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-12-13 16:55:04] 2025-12-13 21:54:31,334 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929266024/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,335 | INFO     | extracted standard info from prmon json
[2025-12-13 16:55:04] 2025-12-13 21:54:31,335 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 16:55:04] 2025-12-13 21:54:31,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:55:04] 2025-12-13 21:54:31,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:55:04] 2025-12-13 21:54:31,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:55:04] 2025-12-13 21:54:31,338 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:55:04] 2025-12-13 21:54:31,339 | INFO     | sum of square deviations: 1154663510.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,339 | INFO     | sum of deviations: -17414744026.999996
[2025-12-13 16:55:04] 2025-12-13 21:54:31,340 | INFO     | mean x: 1765658117.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,340 | INFO     | mean y: 2584932.264516129
[2025-12-13 16:55:04] 2025-12-13 21:54:31,340 | INFO     | intersect: 26632407283.496357
[2025-12-13 16:55:04] 2025-12-13 21:54:31,340 | INFO     | chi2: 1.5963958649836079
[2025-12-13 16:55:04] 2025-12-13 21:54:31,340 | INFO     | sum of square deviations: 1046484737.5
[2025-12-13 16:55:04] 2025-12-13 21:54:31,341 | INFO     | sum of deviations: -15915239221.000006
[2025-12-13 16:55:04] 2025-12-13 21:54:31,341 | INFO     | mean x: 1765657964.5
[2025-12-13 16:55:04] 2025-12-13 21:54:31,341 | INFO     | mean y: 2587046.7333333334
[2025-12-13 16:55:04] 2025-12-13 21:54:31,341 | INFO     | intersect: 26855218413.926525
[2025-12-13 16:55:04] 2025-12-13 21:54:31,342 | INFO     | chi2: 1.595944882417525
[2025-12-13 16:55:04] 2025-12-13 21:54:31,342 | INFO     | current chi2=1.595944882417525 (change=0.028250045992659293 %)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,342 | INFO     | right removable region: 149
[2025-12-13 16:55:04] 2025-12-13 21:54:31,342 | INFO     | sum of square deviations: 1046484737.5
[2025-12-13 16:55:04] 2025-12-13 21:54:31,343 | INFO     | sum of deviations: -40594204725.99999
[2025-12-13 16:55:04] 2025-12-13 21:54:31,343 | INFO     | mean x: 1765658269.5
[2025-12-13 16:55:04] 2025-12-13 21:54:31,343 | INFO     | mean y: 2617123.44
[2025-12-13 16:55:04] 2025-12-13 21:54:31,343 | INFO     | intersect: 68494292825.72216
[2025-12-13 16:55:04] 2025-12-13 21:54:31,344 | INFO     | chi2: 0.1556997333975303
[2025-12-13 16:55:04] 2025-12-13 21:54:31,344 | INFO     | current chi2=0.1556997333975303 (change=90.24679674930573 %)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,344 | INFO     | sum of square deviations: 945282840.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | sum of deviations: -39551301572.99999
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | mean x: 1765658422.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | mean y: 2615492.268965517
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | intersect: 73879010755.542
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | chi2: 0.1356209371520374
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | current chi2=0.1356209371520374 (change=12.895844975037942 %)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,345 | INFO     | left removable region: 20
[2025-12-13 16:55:04] 2025-12-13 21:54:31,346 | INFO     | sum of square deviations: 665612480.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,346 | INFO     | sum of deviations: -30635659303.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,346 | INFO     | mean x: 1765658544.0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,347 | INFO     | mean y: 2607771.3255813955
[2025-12-13 16:55:04] 2025-12-13 21:54:31,347 | INFO     | intersect: 81269283539.50685
[2025-12-13 16:55:04] 2025-12-13 21:54:31,347 | INFO     | chi2: 0.1272172441919192
[2025-12-13 16:55:04] 2025-12-13 21:54:31,347 | INFO     | current memory leak: -46.03 B/s (using 129 data points, chi2=0.13)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,347 | INFO     | could have reported an average CPU frequency of 2184 MHz (9 samples)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | ..............................
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . Timing measurements:
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . get job = 0 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . initial setup = 2 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . payload setup = 8 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . stage-in = 0 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . payload execution = 9444 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . stage-out = 0 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,348 | INFO     | . log creation = 0 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,349 | INFO     | ..............................
[2025-12-13 16:55:04] 2025-12-13 21:54:31,430 | INFO     | 
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | job summary report
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | --------------------------------------------------
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | PanDA job id: 6929266024
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | task id: 47898763
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | errors: (none)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | pilot state: finished 
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | transexitcode: 0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | exeerrorcode: 0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | exeerrordiag: 
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | exitcode: 0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,432 | INFO     | exitmsg: OK
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | cpuconsumptiontime: 71480 s
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | nevents: 400
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | neventsw: 0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | pid: 979
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | pgrp: 979
[2025-12-13 16:55:04] 2025-12-13 21:54:31,433 | INFO     | corecount: 8
[2025-12-13 16:55:04] 2025-12-13 21:54:31,434 | INFO     | event service: False
[2025-12-13 16:55:04] 2025-12-13 21:54:31,434 | INFO     | sizes: {0: 2283774, 1: 2283973, 6: 2284235, 11: 2284263, 9457: 2312650, 9458: 2321832, 9466: 2322034}
[2025-12-13 16:55:04] 2025-12-13 21:54:31,434 | INFO     | --------------------------------------------------
[2025-12-13 16:55:04] 2025-12-13 21:54:31,434 | INFO     | 
[2025-12-13 16:55:04] 2025-12-13 21:54:31,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 16:55:04] 2025-12-13 21:54:31,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:55:04] 2025-12-13 21:54:31,466 | INFO     | job 6929266024 has completed (purged errors)
[2025-12-13 16:55:04] 2025-12-13 21:54:31,466 | INFO     | overall cleanup function is called
[2025-12-13 16:55:04] 2025-12-13 21:54:32,470 | INFO     | --- collectZombieJob: --- 10, [979]
[2025-12-13 16:55:04] 2025-12-13 21:54:32,471 | INFO     | zombie collector waiting for pid 979
[2025-12-13 16:55:04] 2025-12-13 21:54:32,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:55:04] 2025-12-13 21:54:32,471 | INFO     | collected zombie processes
[2025-12-13 16:55:04] 2025-12-13 21:54:32,471 | INFO     | will attempt to kill all subprocesses of pid=979
[2025-12-13 16:55:04] 2025-12-13 21:54:32,556 | INFO     | process IDs to be killed: [979] (in reverse order)
[2025-12-13 16:55:04] 2025-12-13 21:54:32,616 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:55:04] 2025-12-13 21:54:32,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:55:04] 2025-12-13 21:54:32,621 | INFO     | did not find any defunct processes belonging to 979
[2025-12-13 16:55:04] 2025-12-13 21:54:32,625 | INFO     | did not find any defunct processes belonging to 979
[2025-12-13 16:55:04] 2025-12-13 21:54:32,625 | INFO     | ready for new job
[2025-12-13 16:55:04] 2025-12-13 21:54:32,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:55:04] 2025-12-13 21:54:32,627 | INFO     | ***************************************
[2025-12-13 16:55:04] 2025-12-13 21:54:32,627 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:55:04] 2025-12-13 21:54:32,627 | INFO     | ***************************************
[2025-12-13 16:55:04] 2025-12-13 21:54:32,627 | INFO     | 
[2025-12-13 16:55:04] 2025-12-13 21:54:32,628 | INFO     | architecture information:
[2025-12-13 16:55:04] 2025-12-13 21:54:32,628 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:55:04] 2025-12-13 21:54:32,645 | INFO     | cat /etc/os-release:
[2025-12-13 16:55:04] NAME="CentOS Linux"
[2025-12-13 16:55:04] VERSION="7 (Core)"
[2025-12-13 16:55:04] ID="centos"
[2025-12-13 16:55:04] ID_LIKE="rhel fedora"
[2025-12-13 16:55:04] VERSION_ID="7"
[2025-12-13 16:55:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:55:04] ANSI_COLOR="0;31"
[2025-12-13 16:55:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:55:04] HOME_URL="https://www.centos.org/"
[2025-12-13 16:55:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:55:04] 
[2025-12-13 16:55:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:55:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:55:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:55:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:55:04] 
[2025-12-13 16:55:04] 2025-12-13 21:54:32,646 | INFO     | ***************************************
[2025-12-13 16:55:04] 2025-12-13 21:54:33,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 16:55:04] 2025-12-13 21:54:33,167 | INFO     | sufficient remaining disk space (18534629376 B)
[2025-12-13 16:55:04] 2025-12-13 21:54:33,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:55:04] 2025-12-13 21:54:33,168 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:55:04] 2025-12-13 21:54:33,168 | INFO     | update_server=False
[2025-12-13 16:55:04] 2025-12-13 21:54:33,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:55:04] 2025-12-13 21:54:33,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:55:04] 2025-12-13 21:54:33,169 | INFO     | aborting loop
[2025-12-13 16:55:04] 2025-12-13 21:54:33,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:55:04] 2025-12-13 21:54:33,278 | INFO     | all job control threads have been joined
[2025-12-13 16:55:04] 2025-12-13 21:54:33,467 | INFO     | all payload control threads have been joined
[2025-12-13 16:55:04] 2025-12-13 21:54:34,171 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,175 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,176 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,202 | INFO     | all data control threads have been joined
[2025-12-13 16:55:04] 2025-12-13 21:54:34,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:55:04] 2025-12-13 21:54:34,278 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,284 | INFO     | [job] control thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:55:04] 2025-12-13 21:54:34,472 | INFO     | [payload] control thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,537 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:34,977 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:35,208 | INFO     | [data] control thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:35,332 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:35,488 | INFO     | [job] validate thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:35,488 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:35,653 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:36,228 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:38,299 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:55:04] 2025-12-13 21:54:43,908 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:55:04] 2025-12-13 21:54:45,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424340727616)>', '<ExcThread(monitor, started 140423133648640)>']
[2025-12-13 16:55:04] 2025-12-13 21:54:50,759 | INFO     | all workflow threads have been joined
[2025-12-13 16:55:04] 2025-12-13 21:54:50,759 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:55:04] 2025-12-13 21:54:50,760 | INFO     | traces error code: 0
[2025-12-13 16:55:04] 2025-12-13 21:54:50,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:55:04] 2025-12-13 21:55:03,833 | INFO     | PID=26987 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 16:55:04] 2025-12-13 21:55:03,834 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:55:04] 2025-12-13 21:55:03,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:55:04] 2025-12-13 21:55:03,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:55:04] 2025-12-13 21:55:03,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:55:04] 2025-12-13 21:55:03,835 | INFO     | [monitor] control thread has ended
[2025-12-13 16:55:04] 2025-12-13 21:55:03,962 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:55:04] 2025-12-13 21:55:03,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:55:04] 2025-12-13 21:55:03,971 [wrapper] pilotpid: 26987
[2025-12-13 16:55:04] 2025-12-13 21:55:03,976 [wrapper] Pilot exit status: 0
[2025-12-13 16:55:04] 2025-12-13 21:55:03,994 [wrapper] pandaids: 6929266024
[2025-12-13 16:55:04] 2025-12-13 21:55:04,040 [wrapper] cleanup supervisor_pilot  1583 26988
[2025-12-13 16:55:04] 2025-12-13 21:55:04,045 [wrapper] Test setup, not cleaning
[2025-12-13 16:55:04] 2025-12-13 21:55:04,050 [wrapper] apfmon messages muted
[2025-12-13 16:55:04] 2025-12-13 21:55:04,055 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:55:04] 2025-12-13 21:55:04,061 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:55:04]  *** Error codes and diagnostics ***
[2025-12-13 16:55:04]     "exeErrorCode": 0,
[2025-12-13 16:55:04]     "exeErrorDiag": "",
[2025-12-13 16:55:04]     "pilotErrorCode": 0,
[2025-12-13 16:55:04]     "pilotErrorDiag": "",
[2025-12-13 16:55:04]  *** Listing of results directory ***
[2025-12-13 16:55:04] total 444916
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 16:55:04] -rwx------ 1 boincer umatlas     36322 Dec 13 05:02 runpilot2-wrapper.sh
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:03 queuedata.json
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas       100 Dec 13 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:55:04] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 14:16 run_atlas
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas       105 Dec 13 14:16 job.xml
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas 226663233 Dec 13 14:16 EVNT.47898761._000119.pool.root.1
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:16 start_atlas.sh
[2025-12-13 16:55:04] drwxrwx--x 2 boincer umatlas      4096 Dec 13 14:16 shared
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 14:16 input.tar.gz
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas         0 Dec 13 14:16 boinc_lockfile
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas      2501 Dec 13 14:16 pandaJob.out
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas        57 Dec 13 14:16 setup.sh.local
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas    991736 Dec 13 14:16 agis_schedconf.cvmfs.json
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas   1516240 Dec 13 14:16 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:55:04] drwx------ 5 boincer umatlas      4096 Dec 13 14:16 pilot3
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas      5908 Dec 13 16:46 init_data.xml
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas 221619588 Dec 13 16:53 HITS.47898763._002326.pool.root.1
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas       529 Dec 13 16:53 boinc_task_state.xml
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas      1055 Dec 13 16:54 memory_monitor_summary.json
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas    380206 Dec 13 16:54 log.47898763._002326.job.log.tgz.1
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas      7841 Dec 13 16:54 heartbeat.json
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 16:55 boinc_mmap_file
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas        27 Dec 13 16:55 wrapper_checkpoint.txt
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas       745 Dec 13 16:55 pilotlog.txt
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas        95 Dec 13 16:55 pilot_heartbeat.json
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas   1317492 Dec 13 16:55 log.47898763._002326.job.log.1
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas       357 Dec 13 16:55 output.list
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas       620 Dec 13 16:55 runtime_log
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas   1720320 Dec 13 16:55 result.tar.gz
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas       659 Dec 13 16:55 TleMDmpdbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVoSKDmJlJlrn.diag
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas      9337 Dec 13 16:55 runtime_log.err
[2025-12-13 16:55:04] -rw-r--r-- 1 boincer umatlas     21425 Dec 13 16:55 stderr.txt
[2025-12-13 16:55:04] HITS file was successfully produced:
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas 221619588 Dec 13 16:53 shared/HITS.pool.root.1
[2025-12-13 16:55:04]  *** Contents of shared directory: ***
[2025-12-13 16:55:04] total 440060
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas 226663233 Dec 13 14:16 ATLAS.root_0
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 14:16 start_atlas.sh
[2025-12-13 16:55:04] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 14:16 input.tar.gz
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas 221619588 Dec 13 16:53 HITS.pool.root.1
[2025-12-13 16:55:04] -rw------- 1 boincer umatlas   1720320 Dec 13 16:55 result.tar.gz
16:55:05 (23288): run_atlas exited; CPU time 71423.877777
16:55:05 (23288): called boinc_finish(0)

</stderr_txt>
]]>

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