Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:12:25 (2285374): wrapper (7.7.26015): starting
14:12:25 (2285374): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 14:12:25] Arguments: --nthreads 8
[2025-12-13 14:12:25] Threads: 8
[2025-12-13 14:12:25] Checking for CVMFS
[2025-12-13 14:12:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:12:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:12:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:12:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:12:30] 2.13.3.0 12022 54799 364196 153970 2 234 29541585 32935936 40835 16776704 0 114221171 99.517 137117050 12165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 14:12:30] CVMFS is ok
[2025-12-13 14:12:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:12:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:12:30] Further information can be found at the LHC@home message board.
[2025-12-13 14:12:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:12:30] Checking for apptainer binary...
[2025-12-13 14:12:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:12:30] Running /usr/bin/apptainer --version
[2025-12-13 14:12:30] apptainer version 1.4.5-2.el9
[2025-12-13 14:12:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:12:32] c6-12-25-4.aglt2.org
[2025-12-13 14:12:32] apptainer works
[2025-12-13 14:12:32] Set ATHENA_PROC_NUMBER=8
[2025-12-13 14:12:32] Set ATHENA_CORE_NUMBER=8
[2025-12-13 14:12:33] Starting ATLAS job with PandaID=6929265986
[2025-12-13 14:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 01:58:41]  *** The last 200 lines of the pilot log: ***
[2025-12-14 01:58:41] 2025-12-14 06:01:30,274 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 1000.0015625000002
[2025-12-14 01:58:41] 2025-12-14 06:01:30,379 | INFO     | time since job start (38831s) is within the limit (174528.0s)
[2025-12-14 01:58:41] 2025-12-14 06:01:30,471 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929265986/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 01:58:41] 2025-12-14 06:01:30,478 | INFO     | extracted standard info from prmon json
[2025-12-14 01:58:41] 2025-12-14 06:01:30,478 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 01:58:41] 2025-12-14 06:01:30,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 01:58:41] 2025-12-14 06:01:30,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 01:58:41] 2025-12-14 06:01:30,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 01:58:41] 2025-12-14 06:01:30,617 | INFO     | fitting pss+swap vs Time
[2025-12-14 01:58:41] 2025-12-14 06:01:30,632 | INFO     | sum of square deviations: 78278122631.83385
[2025-12-14 01:58:41] 2025-12-14 06:01:30,720 | INFO     | sum of deviations: 37728322076.15807
[2025-12-14 01:58:41] 2025-12-14 06:01:30,721 | INFO     | mean x: 1765672725.1914556
[2025-12-14 01:58:41] 2025-12-14 06:01:30,721 | INFO     | mean y: 2491584.4367088606
[2025-12-14 01:58:41] 2025-12-14 06:01:30,721 | INFO     | intersect: -848523578.1320968
[2025-12-14 01:58:41] 2025-12-14 06:01:30,724 | INFO     | chi2: 6.861191472491693
[2025-12-14 01:58:41] 2025-12-14 06:01:30,733 | INFO     | sum of square deviations: 76434980113.5916
[2025-12-14 01:58:41] 2025-12-14 06:01:30,843 | INFO     | sum of deviations: 208323147029.44968
[2025-12-14 01:58:41] 2025-12-14 06:01:30,873 | INFO     | mean x: 1765672572.692185
[2025-12-14 01:58:41] 2025-12-14 06:01:30,874 | INFO     | mean y: 2505677.846889952
[2025-12-14 01:58:41] 2025-12-14 06:01:30,874 | INFO     | intersect: -4809825880.559749
[2025-12-14 01:58:41] 2025-12-14 06:01:30,876 | INFO     | chi2: 3.6885438629351026
[2025-12-14 01:58:41] 2025-12-14 06:01:30,877 | INFO     | current chi2=3.6885438629351026 (change=46.240476195374555 %)
[2025-12-14 01:58:41] 2025-12-14 06:01:30,882 | INFO     | sum of square deviations: 74620616200.5465
[2025-12-14 01:58:41] 2025-12-14 06:01:30,904 | INFO     | sum of deviations: 206948079245.8806
[2025-12-14 01:58:41] 2025-12-14 06:01:30,905 | INFO     | mean x: 1765672420.176849
[2025-12-14 01:58:41] 2025-12-14 06:01:30,905 | INFO     | mean y: 2505562.2556270096
[2025-12-14 01:58:41] 2025-12-14 06:01:30,905 | INFO     | intersect: -4894298223.858756
[2025-12-14 01:58:41] 2025-12-14 06:01:30,908 | INFO     | chi2: 3.689079580042442
[2025-12-14 01:58:41] 2025-12-14 06:01:30,908 | INFO     | current chi2=3.689079580042442 (change=-0.014523810133388871 %)
[2025-12-14 01:58:41] 2025-12-14 06:01:30,908 | INFO     | right removable region: 621
[2025-12-14 01:58:41] 2025-12-14 06:01:30,910 | INFO     | sum of square deviations: 76434867756.81657
[2025-12-14 01:58:41] 2025-12-14 06:01:30,994 | INFO     | sum of deviations: -136451752250.65068
[2025-12-14 01:58:41] 2025-12-14 06:01:30,994 | INFO     | mean x: 1765672877.6953747
[2025-12-14 01:58:41] 2025-12-14 06:01:30,995 | INFO     | mean y: 2505981.2583732056
[2025-12-14 01:58:41] 2025-12-14 06:01:30,995 | INFO     | intersect: 3154590430.8516846
[2025-12-14 01:58:41] 2025-12-14 06:01:30,997 | INFO     | chi2: 4.055271604198368
[2025-12-14 01:58:41] 2025-12-14 06:01:30,998 | INFO     | current chi2=4.055271604198368 (change=40.89551908794544 %)
[2025-12-14 01:58:41] 2025-12-14 06:01:31,000 | INFO     | sum of square deviations: 74620814832.67723
[2025-12-14 01:58:41] 2025-12-14 06:01:31,023 | INFO     | sum of deviations: -201792006070.23962
[2025-12-14 01:58:41] 2025-12-14 06:01:31,023 | INFO     | mean x: 1765673030.1977491
[2025-12-14 01:58:41] 2025-12-14 06:01:31,023 | INFO     | mean y: 2511464.400321543
[2025-12-14 01:58:41] 2025-12-14 06:01:31,024 | INFO     | intersect: 4777301228.176738
[2025-12-14 01:58:41] 2025-12-14 06:01:31,026 | INFO     | chi2: 3.6046619164659317
[2025-12-14 01:58:41] 2025-12-14 06:01:31,026 | INFO     | current chi2=3.6046619164659317 (change=11.111701797382109 %)
[2025-12-14 01:58:41] 2025-12-14 06:01:31,026 | INFO     | left removable region: 20
[2025-12-14 01:58:41] 2025-12-14 06:01:31,029 | INFO     | sum of square deviations: 67314858931.93357
[2025-12-14 01:58:41] 2025-12-14 06:01:31,049 | INFO     | sum of deviations: -58707650182.64394
[2025-12-14 01:58:41] 2025-12-14 06:01:31,050 | INFO     | mean x: 1765672999.6838603
[2025-12-14 01:58:41] 2025-12-14 06:01:31,050 | INFO     | mean y: 2528428.1913477536
[2025-12-14 01:58:41] 2025-12-14 06:01:31,050 | INFO     | intersect: 1542433798.9683337
[2025-12-14 01:58:41] 2025-12-14 06:01:31,053 | INFO     | chi2: 0.3039299308904959
[2025-12-14 01:58:41] 2025-12-14 06:01:31,053 | INFO     | current memory leak: -0.87 B/s (using 601 data points, chi2=0.30)
[2025-12-14 01:58:41] 2025-12-14 06:01:31,055 | INFO     | could have reported an average CPU frequency of 999 MHz (24 samples)
[2025-12-14 01:58:41] 2025-12-14 06:01:31,055 | INFO     | ..............................
[2025-12-14 01:58:41] 2025-12-14 06:01:31,056 | INFO     | . Timing measurements:
[2025-12-14 01:58:41] 2025-12-14 06:01:31,056 | INFO     | . get job = 1 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,056 | INFO     | . initial setup = 11 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,056 | INFO     | . payload setup = 64 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,056 | INFO     | . stage-in = 1 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,057 | INFO     | . payload execution = 38567 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,057 | INFO     | . stage-out = 21 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,057 | INFO     | . log creation = 4 s
[2025-12-14 01:58:41] 2025-12-14 06:01:31,057 | INFO     | ..............................
[2025-12-14 01:58:41] 2025-12-14 06:01:32,187 | INFO     | 
[2025-12-14 01:58:41] 2025-12-14 06:01:32,187 | INFO     | job summary report
[2025-12-14 01:58:41] 2025-12-14 06:01:32,187 | INFO     | --------------------------------------------------
[2025-12-14 01:58:41] 2025-12-14 06:01:32,188 | INFO     | PanDA job id: 6929265986
[2025-12-14 01:58:41] 2025-12-14 06:01:32,188 | INFO     | task id: 47898763
[2025-12-14 01:58:41] 2025-12-14 06:01:32,188 | INFO     | errors: (none)
[2025-12-14 01:58:41] 2025-12-14 06:01:32,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 01:58:41] 2025-12-14 06:01:32,189 | INFO     | pilot state: finished 
[2025-12-14 01:58:41] 2025-12-14 06:01:32,189 | INFO     | transexitcode: 0
[2025-12-14 01:58:41] 2025-12-14 06:01:32,189 | INFO     | exeerrorcode: 0
[2025-12-14 01:58:41] 2025-12-14 06:01:32,189 | INFO     | exeerrordiag: 
[2025-12-14 01:58:41] 2025-12-14 06:01:32,189 | INFO     | exitcode: 0
[2025-12-14 01:58:41] 2025-12-14 06:01:32,190 | INFO     | exitmsg: OK
[2025-12-14 01:58:41] 2025-12-14 06:01:32,190 | INFO     | cpuconsumptiontime: 148360 s
[2025-12-14 01:58:41] 2025-12-14 06:01:32,190 | INFO     | nevents: 400
[2025-12-14 01:58:41] 2025-12-14 06:01:32,190 | INFO     | neventsw: 0
[2025-12-14 01:58:41] 2025-12-14 06:01:32,190 | INFO     | pid: 2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:32,212 | INFO     | pgrp: 2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:32,212 | INFO     | corecount: 8
[2025-12-14 01:58:41] 2025-12-14 06:01:32,212 | INFO     | event service: False
[2025-12-14 01:58:41] 2025-12-14 06:01:32,213 | INFO     | sizes: {0: 2283724, 1: 2283780, 4: 2283836, 5: 2284063, 17: 2284063, 29: 2284091, 41: 2284247, 53: 2284247, 54: 2284537, 64: 2284565, 38639: 2324435, 38640: 232471
[2025-12-14 01:58:41] 2025-12-14 06:01:32,213 | INFO     | --------------------------------------------------
[2025-12-14 01:58:41] 2025-12-14 06:01:32,213 | INFO     | 
[2025-12-14 01:58:41] 2025-12-14 06:01:32,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 01:58:41] 2025-12-14 06:01:32,508 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,508 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 01:58:41] 2025-12-14 06:01:32,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 01:58:41] 2025-12-14 06:01:32,549 | INFO     | job 6929265986 has completed (purged errors)
[2025-12-14 01:58:41] 2025-12-14 06:01:32,550 | INFO     | overall cleanup function is called
[2025-12-14 01:58:41] 2025-12-14 06:01:33,622 | INFO     | --- collectZombieJob: --- 10, [2303447]
[2025-12-14 01:58:41] 2025-12-14 06:01:33,622 | INFO     | zombie collector waiting for pid 2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:33,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 01:58:41] 2025-12-14 06:01:33,623 | INFO     | collected zombie processes
[2025-12-14 01:58:41] 2025-12-14 06:01:33,623 | INFO     | will attempt to kill all subprocesses of pid=2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:46,683 | INFO     | PID=2291843 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 01:58:41] 2025-12-14 06:01:46,688 | INFO     | .. there are 55 such processes running
[2025-12-14 01:58:41] 2025-12-14 06:01:47,016 | INFO     | process IDs to be killed: [2303447] (in reverse order)
[2025-12-14 01:58:41] 2025-12-14 06:01:54,945 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 01:58:41] 2025-12-14 06:01:54,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 01:58:41] 2025-12-14 06:01:55,085 | INFO     | did not find any defunct processes belonging to 2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:55,279 | INFO     | did not find any defunct processes belonging to 2303447
[2025-12-14 01:58:41] 2025-12-14 06:01:55,279 | INFO     | ready for new job
[2025-12-14 01:58:41] 2025-12-14 06:01:55,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 01:58:41] 2025-12-14 06:01:55,307 | INFO     | ***************************************
[2025-12-14 01:58:41] 2025-12-14 06:01:55,307 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 01:58:41] 2025-12-14 06:01:55,307 | INFO     | ***************************************
[2025-12-14 01:58:41] 2025-12-14 06:01:55,308 | INFO     | 
[2025-12-14 01:58:41] 2025-12-14 06:01:55,365 | INFO     | architecture information:
[2025-12-14 01:58:41] 2025-12-14 06:01:55,369 | INFO     | executing command: cat /etc/os-release
[2025-12-14 01:58:41] 2025-12-14 06:01:55,502 | INFO     | cat /etc/os-release:
[2025-12-14 01:58:41] NAME="CentOS Linux"
[2025-12-14 01:58:41] VERSION="7 (Core)"
[2025-12-14 01:58:41] ID="centos"
[2025-12-14 01:58:41] ID_LIKE="rhel fedora"
[2025-12-14 01:58:41] VERSION_ID="7"
[2025-12-14 01:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 01:58:41] ANSI_COLOR="0;31"
[2025-12-14 01:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 01:58:41] HOME_URL="https://www.centos.org/"
[2025-12-14 01:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 01:58:41] 
[2025-12-14 01:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 01:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 01:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 01:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 01:58:41] 
[2025-12-14 01:58:41] 2025-12-14 06:01:55,503 | INFO     | ***************************************
[2025-12-14 01:58:41] 2025-12-14 06:01:56,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 01:58:41] 2025-12-14 06:01:56,164 | INFO     | sufficient remaining disk space (92146761728 B)
[2025-12-14 01:58:41] 2025-12-14 06:01:56,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 01:58:41] 2025-12-14 06:01:56,165 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 01:58:41] 2025-12-14 06:01:56,165 | INFO     | update_server=False
[2025-12-14 01:58:41] 2025-12-14 06:01:56,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 01:58:41] 2025-12-14 06:01:56,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 01:58:41] 2025-12-14 06:01:56,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 01:58:41] 2025-12-14 06:01:56,175 | INFO     | aborting loop
[2025-12-14 01:58:41] 2025-12-14 06:01:56,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 01:58:41] 2025-12-14 06:01:56,603 | INFO     | all data control threads have been joined
[2025-12-14 01:58:41] 2025-12-14 06:01:56,696 | INFO     | all payload control threads have been joined
[2025-12-14 01:58:41] 2025-12-14 06:01:56,921 | INFO     | all job control threads have been joined
[2025-12-14 01:58:41] 2025-12-14 06:01:57,172 | INFO     | [job] retrieve thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,195 | INFO     | [job] job monitor thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,252 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,253 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 01:58:41] 2025-12-14 06:01:57,609 | INFO     | [data] control thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,702 | INFO     | [payload] control thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:57,940 | INFO     | [job] control thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,091 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,201 | INFO     | [data] copytool_out thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,488 | INFO     | [payload] failed_post thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,489 | INFO     | [payload] validate_post thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,494 | INFO     | [job] queue monitor thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,498 | INFO     | [job] validate thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:01:58,600 | INFO     | [data] copytool_in thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:02:00,212 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 01:58:41] 2025-12-14 06:02:28,983 | INFO     | PID=2291843 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 01:58:41] 2025-12-14 06:02:28,984 | INFO     | .. there are 55 such processes running
[2025-12-14 01:58:41] 2025-12-14 06:02:28,984 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 01:58:41] 2025-12-14 06:02:28,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 01:58:41] 2025-12-14 06:02:28,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 01:58:41] 2025-12-14 06:02:32,727 | INFO     | [monitor] cgroup control has ended
[2025-12-14 01:58:41] 2025-12-14 06:02:33,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624514070336)>', '<ExcThread(monitor, started 139623883863808)>']
[2025-12-14 01:58:41] 2025-12-14 06:02:34,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 01:58:41] 2025-12-14 06:02:34,022 | INFO     | [monitor] control thread has ended
[2025-12-14 01:58:41] 2025-12-14 06:02:38,302 | INFO     | all workflow threads have been joined
[2025-12-14 01:58:41] 2025-12-14 06:02:38,302 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 01:58:41] 2025-12-14 06:02:38,303 | INFO     | traces error code: 0
[2025-12-14 01:58:41] 2025-12-14 06:02:38,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 01:58:41] 2025-12-14 06:02:41,402 [wrapper] ==== pilot stdout END ====
[2025-12-14 01:58:41] 2025-12-14 06:02:41,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 01:58:41] 2025-12-14 06:02:41,445 [wrapper] pilotpid: 2291843
[2025-12-14 01:58:41] 2025-12-14 06:02:41,633 [wrapper] Pilot exit status: 0
[2025-12-14 01:58:41] 2025-12-14 06:02:41,806 [wrapper] pandaids: 6929265986
[2025-12-14 01:58:41] 2025-12-14 06:02:42,317 [wrapper] cleanup supervisor_pilot 4149569 2291844
[2025-12-14 01:58:41] 2025-12-14 06:02:42,343 [wrapper] Test setup, not cleaning
[2025-12-14 01:58:41] 2025-12-14 06:02:42,375 [wrapper] apfmon messages muted
[2025-12-14 01:58:41] 2025-12-14 06:02:42,428 [wrapper] ==== wrapper stdout END ====
[2025-12-14 01:58:41] 2025-12-14 06:02:42,461 [wrapper] ==== wrapper stderr END ====
[2025-12-14 01:58:41]  *** Error codes and diagnostics ***
[2025-12-14 01:58:41]     "exeErrorCode": 0,
[2025-12-14 01:58:41]     "exeErrorDiag": "",
[2025-12-14 01:58:41]     "pilotErrorCode": 0,
[2025-12-14 01:58:41]     "pilotErrorDiag": "",
[2025-12-14 01:58:41]  *** Listing of results directory ***
[2025-12-14 01:58:41] total 441448
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 05:02 queuedata.json
[2025-12-14 01:58:41] -rwx------. 1 boincer umatlas     36322 Dec 13 05:02 runpilot2-wrapper.sh
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas       100 Dec 13 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 01:58:41] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 14:12 run_atlas
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas       105 Dec 13 14:12 job.xml
[2025-12-14 01:58:41] -rw-r--r--. 2 boincer umatlas 222387677 Dec 13 14:12 EVNT.47898761._000117.pool.root.1
[2025-12-14 01:58:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 14:12 start_atlas.sh
[2025-12-14 01:58:41] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 14:12 shared
[2025-12-14 01:58:41] -rw-r--r--. 2 boincer umatlas    592388 Dec 13 14:12 input.tar.gz
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas         0 Dec 13 14:12 boinc_lockfile
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas      2504 Dec 13 14:12 pandaJob.out
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas        57 Dec 13 14:12 setup.sh.local
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas    991736 Dec 13 14:14 agis_schedconf.cvmfs.json
[2025-12-14 01:58:41] drwx------. 5 boincer umatlas      4096 Dec 13 14:14 pilot3
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas 217153136 Dec 14 00:56 HITS.47898763._002288.pool.root.1
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas       532 Dec 14 00:56 boinc_task_state.xml
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas      1040 Dec 14 01:00 memory_monitor_summary.json
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas   1516240 Dec 14 01:00 agis_ddmendpoints.agis.ALL.json
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas    676199 Dec 14 01:00 log.47898763._002288.job.log.tgz.1
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas      7831 Dec 14 01:01 heartbeat.json
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas        95 Dec 14 01:01 pilot_heartbeat.json
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas      4824 Dec 14 01:02 pilotlog.txt
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas   3615483 Dec 14 01:02 log.47898763._002288.job.log.1
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas       357 Dec 14 01:02 output.list
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas       620 Dec 14 01:02 runtime_log
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas   4311040 Dec 14 01:02 result.tar.gz
[2025-12-14 01:58:41] -rw-------. 1 boincer umatlas       662 Dec 14 01:02 ZX2LDmpdbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5nSKDmRHEW4n.diag
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas      9353 Dec 14 01:02 runtime_log.err
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas      6880 Dec 14 01:58 init_data.xml
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 01:58 boinc_mmap_file
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas        29 Dec 14 01:58 wrapper_checkpoint.txt
[2025-12-14 01:58:41] -rw-r--r--. 1 boincer umatlas     21337 Dec 14 01:58 stderr.txt
[2025-12-14 01:58:42] HITS file was successfully produced:
[2025-12-14 01:58:42] -rw-------. 1 boincer umatlas 217153136 Dec 14 00:56 shared/HITS.pool.root.1
[2025-12-14 01:58:42]  *** Contents of shared directory: ***
[2025-12-14 01:58:42] total 434052
[2025-12-14 01:58:42] -rw-r--r--. 2 boincer umatlas 222387677 Dec 13 14:12 ATLAS.root_0
[2025-12-14 01:58:42] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 14:12 start_atlas.sh
[2025-12-14 01:58:42] -rw-r--r--. 2 boincer umatlas    592388 Dec 13 14:12 input.tar.gz
[2025-12-14 01:58:42] -rw-------. 1 boincer umatlas 217153136 Dec 14 00:56 HITS.pool.root.1
[2025-12-14 01:58:42] -rw-------. 1 boincer umatlas   4311040 Dec 14 01:02 result.tar.gz
01:58:43 (2285374): run_atlas exited; CPU time 152381.366643
01:58:43 (2285374): called boinc_finish(0)

</stderr_txt>
]]>

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