Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:34 (3794133): wrapper (7.7.26015): starting
15:31:34 (3794133): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 15:31:34] Arguments: --nthreads 8
[2025-12-13 15:31:34] Threads: 8
[2025-12-13 15:31:34] Checking for CVMFS
[2025-12-13 15:31:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:31:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:31:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:31:38] 2.13.3.0 12130 53317 333280 153972 1 486 33098671 40960001 24627 16776704 0 174040121 99.570 194121991 35883 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 15:31:38] CVMFS is ok
[2025-12-13 15:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:31:38] Further information can be found at the LHC@home message board.
[2025-12-13 15:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:31:38] Checking for apptainer binary...
[2025-12-13 15:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:31:38] Running /usr/bin/apptainer --version
[2025-12-13 15:31:39] apptainer version 1.4.5-2.el9
[2025-12-13 15:31:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:31:39] c6-5-7-4.aglt2.org
[2025-12-13 15:31:39] apptainer works
[2025-12-13 15:31:39] Set ATHENA_PROC_NUMBER=8
[2025-12-13 15:31:39] Set ATHENA_CORE_NUMBER=8
[2025-12-13 15:31:40] Starting ATLAS job with PandaID=6929221778
[2025-12-13 15:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 19:21:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 19:21:32] 2025-12-14 00:20:41,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 19:21:32] 2025-12-14 00:20:41,403 | INFO     | time since job start (13660s) is within the limit (174528.0s)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,085 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 19:21:32] 2025-12-14 00:20:43,103 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2781.2111071428576
[2025-12-13 19:21:32] 2025-12-14 00:20:43,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929221778/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,113 | INFO     | extracted standard info from prmon json
[2025-12-13 19:21:32] 2025-12-14 00:20:43,113 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 19:21:32] 2025-12-14 00:20:43,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 19:21:32] 2025-12-14 00:20:43,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 19:21:32] 2025-12-14 00:20:43,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 19:21:32] 2025-12-14 00:20:43,118 | INFO     | fitting pss+swap vs Time
[2025-12-13 19:21:32] 2025-12-14 00:20:43,119 | INFO     | sum of square deviations: 3346737037.113125
[2025-12-13 19:21:32] 2025-12-14 00:20:43,120 | INFO     | sum of deviations: 65911903262.846054
[2025-12-13 19:21:32] 2025-12-14 00:20:43,120 | INFO     | mean x: 1765664870.4751132
[2025-12-13 19:21:32] 2025-12-14 00:20:43,120 | INFO     | mean y: 2429389.153846154
[2025-12-13 19:21:32] 2025-12-14 00:20:43,120 | INFO     | intersect: -34771241457.047
[2025-12-13 19:21:32] 2025-12-14 00:20:43,121 | INFO     | chi2: 4.470046089938244
[2025-12-13 19:21:32] 2025-12-14 00:20:43,121 | INFO     | sum of square deviations: 3124686543.925911
[2025-12-13 19:21:32] 2025-12-14 00:20:43,122 | INFO     | sum of deviations: 78117245315.96301
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | mean x: 1765664717.9814816
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | mean y: 2437596.7407407407
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | intersect: -44139226529.03228
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | chi2: 3.7909564246444667
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | current chi2=3.7909564246444667 (change=15.192005890551336 %)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,123 | INFO     | right removable region: 215
[2025-12-13 19:21:32] 2025-12-14 00:20:43,124 | INFO     | sum of square deviations: 3124635730.958337
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | sum of deviations: 4664304083.055571
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | mean x: 1765665022.9861112
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | mean y: 2471342.0185185187
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | intersect: -2633227435.4183764
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | chi2: 1.3809822840618136
[2025-12-13 19:21:32] 2025-12-14 00:20:43,125 | INFO     | current chi2=1.3809822840618136 (change=69.10586029145635 %)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,126 | INFO     | sum of square deviations: 2912633584.6540403
[2025-12-13 19:21:32] 2025-12-14 00:20:43,127 | INFO     | sum of deviations: -17339171882.184837
[2025-12-13 19:21:32] 2025-12-14 00:20:43,127 | INFO     | mean x: 1765665175.478673
[2025-12-13 19:21:32] 2025-12-14 00:20:43,127 | INFO     | mean y: 2487082.625592417
[2025-12-13 19:21:32] 2025-12-14 00:20:43,127 | INFO     | intersect: 10513652004.061876
[2025-12-13 19:21:32] 2025-12-14 00:20:43,127 | INFO     | chi2: 0.9283655920701378
[2025-12-13 19:21:32] 2025-12-14 00:20:43,128 | INFO     | current chi2=0.9283655920701378 (change=32.77498178039019 %)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,128 | INFO     | sum of square deviations: 2710432702.8786397
[2025-12-13 19:21:32] 2025-12-14 00:20:43,129 | INFO     | sum of deviations: -24789449232.757286
[2025-12-13 19:21:32] 2025-12-14 00:20:43,129 | INFO     | mean x: 1765665327.9757283
[2025-12-13 19:21:32] 2025-12-14 00:20:43,129 | INFO     | mean y: 2492677.0485436893
[2025-12-13 19:21:32] 2025-12-14 00:20:43,129 | INFO     | intersect: 16151158151.534544
[2025-12-13 19:21:32] 2025-12-14 00:20:43,129 | INFO     | chi2: 0.8660970284946738
[2025-12-13 19:21:32] 2025-12-14 00:20:43,130 | INFO     | current chi2=0.8660970284946738 (change=6.707332122963856 %)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,130 | INFO     | left removable region: 30
[2025-12-13 19:21:32] 2025-12-14 00:20:43,130 | INFO     | sum of square deviations: 1963160639.7621546
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | sum of deviations: -5930522050.14595
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | mean x: 1765665602.4486487
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | mean y: 2498171.6162162162
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | intersect: 5336406450.143332
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | chi2: 0.12719111642320619
[2025-12-13 19:21:32] 2025-12-14 00:20:43,131 | INFO     | current memory leak: -3.02 B/s (using 185 data points, chi2=0.13)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | could have reported an average CPU frequency of 2805 MHz (11 samples)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | ..............................
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . Timing measurements:
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . get job = 0 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . initial setup = 8 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . payload setup = 54 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . stage-in = 0 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . payload execution = 13493 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,132 | INFO     | . stage-out = 6 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,133 | INFO     | . log creation = 0 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,133 | INFO     | ..............................
[2025-12-13 19:21:32] 2025-12-14 00:20:43,219 | INFO     | 
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | job summary report
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | --------------------------------------------------
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | PanDA job id: 6929221778
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | task id: 47886831
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | errors: (none)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 19:21:32] 2025-12-14 00:20:43,221 | INFO     | pilot state: finished 
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | transexitcode: 0
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | exeerrorcode: 0
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | exeerrordiag: 
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | exitcode: 0
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | exitmsg: OK
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | cpuconsumptiontime: 43934 s
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | nevents: 400
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | neventsw: 0
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | pid: 3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | pgrp: 3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | corecount: 8
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | event service: False
[2025-12-13 19:21:32] 2025-12-14 00:20:43,222 | INFO     | sizes: {0: 2283161, 1: 2283846, 2: 2284045, 3: 2284045, 14: 2284073, 25: 2284101, 37: 2284257, 41: 2284547, 49: 2284575, 13552: 2314655, 13561: 2323653, 13562: 232
[2025-12-13 19:21:32] 2025-12-14 00:20:43,223 | INFO     | --------------------------------------------------
[2025-12-13 19:21:32] 2025-12-14 00:20:43,223 | INFO     | 
[2025-12-13 19:21:32] 2025-12-14 00:20:43,223 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | job 6929221778 has completed (purged errors)
[2025-12-13 19:21:32] 2025-12-14 00:20:43,360 | INFO     | overall cleanup function is called
[2025-12-13 19:21:32] 2025-12-14 00:20:44,383 | INFO     | --- collectZombieJob: --- 10, [3811743]
[2025-12-13 19:21:32] 2025-12-14 00:20:44,383 | INFO     | zombie collector waiting for pid 3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:44,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 19:21:32] 2025-12-14 00:20:44,383 | INFO     | collected zombie processes
[2025-12-13 19:21:32] 2025-12-14 00:20:44,383 | INFO     | will attempt to kill all subprocesses of pid=3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:45,627 | INFO     | process IDs to be killed: [3811743] (in reverse order)
[2025-12-13 19:21:32] 2025-12-14 00:20:45,941 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 19:21:32] 2025-12-14 00:20:45,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 19:21:32] 2025-12-14 00:20:46,030 | INFO     | did not find any defunct processes belonging to 3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:46,122 | INFO     | did not find any defunct processes belonging to 3811743
[2025-12-13 19:21:32] 2025-12-14 00:20:46,122 | INFO     | ready for new job
[2025-12-13 19:21:32] 2025-12-14 00:20:46,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 19:21:32] 2025-12-14 00:20:46,268 | INFO     | ***************************************
[2025-12-13 19:21:32] 2025-12-14 00:20:46,268 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 19:21:32] 2025-12-14 00:20:46,268 | INFO     | ***************************************
[2025-12-13 19:21:32] 2025-12-14 00:20:46,268 | INFO     | 
[2025-12-13 19:21:32] 2025-12-14 00:20:46,271 | INFO     | architecture information:
[2025-12-13 19:21:32] 2025-12-14 00:20:46,271 | INFO     | executing command: cat /etc/os-release
[2025-12-13 19:21:32] 2025-12-14 00:20:46,291 | INFO     | cat /etc/os-release:
[2025-12-13 19:21:32] NAME="CentOS Linux"
[2025-12-13 19:21:32] VERSION="7 (Core)"
[2025-12-13 19:21:32] ID="centos"
[2025-12-13 19:21:32] ID_LIKE="rhel fedora"
[2025-12-13 19:21:32] VERSION_ID="7"
[2025-12-13 19:21:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 19:21:32] ANSI_COLOR="0;31"
[2025-12-13 19:21:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 19:21:32] HOME_URL="https://www.centos.org/"
[2025-12-13 19:21:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 19:21:32] 
[2025-12-13 19:21:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 19:21:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 19:21:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 19:21:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 19:21:32] 
[2025-12-13 19:21:32] 2025-12-14 00:20:46,291 | INFO     | ***************************************
[2025-12-13 19:21:32] 2025-12-14 00:20:46,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 19:21:32] 2025-12-14 00:20:46,993 | INFO     | sufficient remaining disk space (74254909440 B)
[2025-12-13 19:21:32] 2025-12-14 00:20:46,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 19:21:32] 2025-12-14 00:20:46,994 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 19:21:32] 2025-12-14 00:20:46,994 | INFO     | update_server=False
[2025-12-13 19:21:32] 2025-12-14 00:20:46,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 19:21:32] 2025-12-14 00:20:47,295 | INFO     | all data control threads have been joined
[2025-12-13 19:21:32] 2025-12-14 00:20:47,380 | INFO     | all job control threads have been joined
[2025-12-13 19:21:32] 2025-12-14 00:20:47,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 19:21:32] 2025-12-14 00:20:47,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:21:32] 2025-12-14 00:20:47,399 | INFO     | aborting loop
[2025-12-13 19:21:32] 2025-12-14 00:20:48,000 | INFO     | [job] retrieve thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:21:32] 2025-12-14 00:20:48,305 | INFO     | [data] control thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,387 | INFO     | [job] control thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,405 | INFO     | [job] job monitor thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,411 | INFO     | all payload control threads have been joined
[2025-12-13 19:21:32] 2025-12-14 00:20:48,507 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,533 | INFO     | [job] validate thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,571 | INFO     | [payload] failed_post thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,609 | INFO     | [data] copytool_in thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,919 | INFO     | [payload] validate_post thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:48,925 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:49,009 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:49,287 | INFO     | [job] queue monitor thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:49,391 | INFO     | [data] copytool_out thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:49,417 | INFO     | [payload] control thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:20:49,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 19:21:32] 2025-12-14 00:20:53,828 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 19:21:32] 2025-12-14 00:21:15,035 | INFO     | PID=3799766 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 19:21:32] 2025-12-14 00:21:15,035 | INFO     | .. there are 23 such processes running
[2025-12-13 19:21:32] 2025-12-14 00:21:15,135 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 19:21:32] 2025-12-14 00:21:15,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 19:21:32] 2025-12-14 00:21:15,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 19:21:32] 2025-12-14 00:21:26,015 | INFO     | [monitor] cgroup control has ended
[2025-12-13 19:21:32] 2025-12-14 00:21:26,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577562187584)>', '<ExcThread(monitor, started 140577064597248)>']
[2025-12-13 19:21:32] 2025-12-14 00:21:27,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 19:21:32] 2025-12-14 00:21:27,219 | INFO     | [monitor] control thread has ended
[2025-12-13 19:21:32] 2025-12-14 00:21:31,855 | INFO     | all workflow threads have been joined
[2025-12-13 19:21:32] 2025-12-14 00:21:31,855 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 19:21:32] 2025-12-14 00:21:31,856 | INFO     | traces error code: 0
[2025-12-13 19:21:32] 2025-12-14 00:21:31,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 19:21:32] 2025-12-14 00:21:32,324 [wrapper] ==== pilot stdout END ====
[2025-12-13 19:21:32] 2025-12-14 00:21:32,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 19:21:32] 2025-12-14 00:21:32,357 [wrapper] pilotpid: 3799766
[2025-12-13 19:21:32] 2025-12-14 00:21:32,360 [wrapper] Pilot exit status: 0
[2025-12-13 19:21:32] 2025-12-14 00:21:32,409 [wrapper] pandaids: 6929221778
[2025-12-13 19:21:32] 2025-12-14 00:21:32,568 [wrapper] cleanup supervisor_pilot  311468 3799767
[2025-12-13 19:21:32] 2025-12-14 00:21:32,572 [wrapper] Test setup, not cleaning
[2025-12-13 19:21:32] 2025-12-14 00:21:32,580 [wrapper] apfmon messages muted
[2025-12-13 19:21:32] 2025-12-14 00:21:32,600 [wrapper] ==== wrapper stdout END ====
[2025-12-13 19:21:32] 2025-12-14 00:21:32,617 [wrapper] ==== wrapper stderr END ====
[2025-12-13 19:21:32]  *** Error codes and diagnostics ***
[2025-12-13 19:21:32]     "exeErrorCode": 0,
[2025-12-13 19:21:32]     "exeErrorDiag": "",
[2025-12-13 19:21:32]     "pilotErrorCode": 0,
[2025-12-13 19:21:32]     "pilotErrorDiag": "",
[2025-12-13 19:21:32]  *** Listing of results directory ***
[2025-12-13 19:21:32] total 337272
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 19:21:32] -rwx------. 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas       100 Dec 13 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 19:21:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 15:31 run_atlas
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas       105 Dec 13 15:31 job.xml
[2025-12-13 19:21:32] -rw-r--r--. 2 boincer umatlas 191687064 Dec 13 15:31 EVNT.47886829._000154.pool.root.1
[2025-12-13 19:21:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 15:31 start_atlas.sh
[2025-12-13 19:21:32] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 15:31 shared
[2025-12-13 19:21:32] -rw-r--r--. 2 boincer umatlas    592412 Dec 13 15:31 input.tar.gz
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas         0 Dec 13 15:31 boinc_lockfile
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas      2537 Dec 13 15:31 pandaJob.out
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas        57 Dec 13 15:31 setup.sh.local
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas    991736 Dec 13 15:32 agis_schedconf.cvmfs.json
[2025-12-13 19:21:32] drwx------. 5 boincer umatlas      4096 Dec 13 15:33 pilot3
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas      6843 Dec 13 19:09 init_data.xml
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas 145475068 Dec 13 19:19 HITS.47886831._003853.pool.root.1
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas       530 Dec 13 19:19 boinc_task_state.xml
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas      1042 Dec 13 19:20 memory_monitor_summary.json
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas   1516240 Dec 13 19:20 agis_ddmendpoints.agis.ALL.json
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas    452390 Dec 13 19:20 log.47886831._003853.job.log.tgz.1
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas      7823 Dec 13 19:20 heartbeat.json
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas        95 Dec 13 19:21 pilot_heartbeat.json
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 19:21 boinc_mmap_file
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas        28 Dec 13 19:21 wrapper_checkpoint.txt
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas      4824 Dec 13 19:21 pilotlog.txt
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas   1687592 Dec 13 19:21 log.47886831._003853.job.log.1
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas       357 Dec 13 19:21 output.list
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas       620 Dec 13 19:21 runtime_log
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas   2160640 Dec 13 19:21 result.tar.gz
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 19:21 runtime_log.err
[2025-12-13 19:21:32] -rw-------. 1 boincer umatlas       656 Dec 13 19:21 EHZLDmnTao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNBOKDmCI4tbn.diag
[2025-12-13 19:21:32] -rw-r--r--. 1 boincer umatlas     21250 Dec 13 19:21 stderr.txt
[2025-12-13 19:21:32] HITS file was successfully produced:
[2025-12-13 19:21:33] -rw-------. 1 boincer umatlas 145475068 Dec 13 19:19 shared/HITS.pool.root.1
[2025-12-13 19:21:33]  *** Contents of shared directory: ***
[2025-12-13 19:21:33] total 331976
[2025-12-13 19:21:33] -rw-r--r--. 2 boincer umatlas 191687064 Dec 13 15:31 ATLAS.root_0
[2025-12-13 19:21:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 15:31 start_atlas.sh
[2025-12-13 19:21:33] -rw-r--r--. 2 boincer umatlas    592412 Dec 13 15:31 input.tar.gz
[2025-12-13 19:21:33] -rw-------. 1 boincer umatlas 145475068 Dec 13 19:19 HITS.pool.root.1
[2025-12-13 19:21:33] -rw-------. 1 boincer umatlas   2160640 Dec 13 19:21 result.tar.gz
19:21:34 (3794133): run_atlas exited; CPU time 44363.387068
19:21:34 (3794133): called boinc_finish(0)

</stderr_txt>
]]>

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