Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:13:02 (1270154): wrapper (7.7.26015): starting
21:13:02 (1270154): wrapper: running run_atlas (--nthreads 3)
[2025-12-15 21:13:02] Arguments: --nthreads 3
[2025-12-15 21:13:02] Threads: 3
[2025-12-15 21:13:02] Checking for CVMFS
[2025-12-15 21:13:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-15 21:13:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-15 21:13:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-15 21:13:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-15 21:13:02] 2.12.7.0 4249 3709 65692 154045 2 104 5294738 6144000 794 130560 0 2459509 99.989 132211 6498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-12-15 21:13:02] CVMFS is ok
[2025-12-15 21:13:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 21:13:02] Checking for apptainer binary...
[2025-12-15 21:13:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-15 21:13:02] Running /usr/bin/apptainer --version
[2025-12-15 21:13:02] apptainer version 1.4.5
[2025-12-15 21:13:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 21:13:02] TS-P310
[2025-12-15 21:13:02] apptainer works
[2025-12-15 21:13:02] Set ATHENA_PROC_NUMBER=3
[2025-12-15 21:13:02] Set ATHENA_CORE_NUMBER=3
[2025-12-15 21:13:02] Starting ATLAS job with PandaID=6929262114
[2025-12-15 21:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 02:42:48]  *** The last 200 lines of the pilot log: ***
[2025-12-16 02:42:48] 2025-12-16 01:42:00,678 | INFO     | time since job start (19731s) is within the limit (174528.0s)
[2025-12-16 02:42:48] 2025-12-16 01:42:00,829 | INFO     | monitor loop #1479: job 0:6929262114 is in state 'finished'
[2025-12-16 02:42:48] 2025-12-16 01:42:00,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 02:42:48] 2025-12-16 01:42:02,684 | INFO     | time since job start (19733s) is within the limit (174528.0s)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,330 | INFO     | monitor loop #1480: job 0:6929262114 is in state 'finished'
[2025-12-16 02:42:48] 2025-12-16 01:42:03,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 02:42:48] 2025-12-16 01:42:03,651 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3699.9806249999997
[2025-12-16 02:42:48] 2025-12-16 01:42:03,652 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6929262114/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,653 | INFO     | extracted standard info from prmon json
[2025-12-16 02:42:48] 2025-12-16 01:42:03,653 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 02:42:48] 2025-12-16 01:42:03,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 02:42:48] 2025-12-16 01:42:03,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 02:42:48] 2025-12-16 01:42:03,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 02:42:48] 2025-12-16 01:42:03,661 | INFO     | fitting pss+swap vs Time
[2025-12-16 02:42:48] 2025-12-16 01:42:03,662 | INFO     | sum of square deviations: 10449170802.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,667 | INFO     | sum of deviations: -14051257585.000008
[2025-12-16 02:42:48] 2025-12-16 01:42:03,667 | INFO     | mean x: 1765839433.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,667 | INFO     | mean y: 2357642.8235294116
[2025-12-16 02:42:48] 2025-12-16 01:42:03,667 | INFO     | intersect: 2376925462.3182807
[2025-12-16 02:42:48] 2025-12-16 01:42:03,668 | INFO     | chi2: 1.141972314086453
[2025-12-16 02:42:48] 2025-12-16 01:42:03,668 | INFO     | sum of square deviations: 9971385099.5
[2025-12-16 02:42:48] 2025-12-16 01:42:03,673 | INFO     | sum of deviations: -13784438399.999998
[2025-12-16 02:42:48] 2025-12-16 01:42:03,673 | INFO     | mean x: 1765839280.5
[2025-12-16 02:42:48] 2025-12-16 01:42:03,674 | INFO     | mean y: 2357727.993710692
[2025-12-16 02:42:48] 2025-12-16 01:42:03,674 | INFO     | intersect: 2443453176.9673057
[2025-12-16 02:42:48] 2025-12-16 01:42:03,674 | INFO     | chi2: 1.1416871263216906
[2025-12-16 02:42:48] 2025-12-16 01:42:03,674 | INFO     | current chi2=1.1416871263216906 (change=0.02497326434666134 %)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,674 | INFO     | right removable region: 317
[2025-12-16 02:42:48] 2025-12-16 01:42:03,675 | INFO     | sum of square deviations: 9971385099.5
[2025-12-16 02:42:48] 2025-12-16 01:42:03,680 | INFO     | sum of deviations: -45271087261.499985
[2025-12-16 02:42:48] 2025-12-16 01:42:03,680 | INFO     | mean x: 1765839585.5
[2025-12-16 02:42:48] 2025-12-16 01:42:03,680 | INFO     | mean y: 2367506.544025157
[2025-12-16 02:42:48] 2025-12-16 01:42:03,680 | INFO     | intersect: 8019456122.346259
[2025-12-16 02:42:48] 2025-12-16 01:42:03,681 | INFO     | chi2: 0.05706463758113375
[2025-12-16 02:42:48] 2025-12-16 01:42:03,681 | INFO     | current chi2=0.05706463758113375 (change=95.00297538940042 %)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,682 | INFO     | sum of square deviations: 9508390372.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,686 | INFO     | sum of deviations: -42359552839.00003
[2025-12-16 02:42:48] 2025-12-16 01:42:03,686 | INFO     | mean x: 1765839738.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,687 | INFO     | mean y: 2366546.6006389777
[2025-12-16 02:42:48] 2025-12-16 01:42:03,687 | INFO     | intersect: 7869121986.857501
[2025-12-16 02:42:48] 2025-12-16 01:42:03,687 | INFO     | chi2: 0.056776952728678165
[2025-12-16 02:42:48] 2025-12-16 01:42:03,687 | INFO     | current chi2=0.056776952728678165 (change=0.5041385780231323 %)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,687 | INFO     | left removable region: 20
[2025-12-16 02:42:48] 2025-12-16 01:42:03,688 | INFO     | sum of square deviations: 8123493708.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,692 | INFO     | sum of deviations: -34145012360.999996
[2025-12-16 02:42:48] 2025-12-16 01:42:03,692 | INFO     | mean x: 1765839860.0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,693 | INFO     | mean y: 2364163.447811448
[2025-12-16 02:42:48] 2025-12-16 01:42:03,693 | INFO     | intersect: 7424616954.493673
[2025-12-16 02:42:48] 2025-12-16 01:42:03,693 | INFO     | chi2: 0.05313187830108956
[2025-12-16 02:42:48] 2025-12-16 01:42:03,693 | INFO     | current memory leak: -4.20 B/s (using 297 data points, chi2=0.05)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,694 | INFO     | could have reported an average CPU frequency of 3699 MHz (14 samples)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,694 | INFO     | ..............................
[2025-12-16 02:42:48] 2025-12-16 01:42:03,694 | INFO     | . Timing measurements:
[2025-12-16 02:42:48] 2025-12-16 01:42:03,694 | INFO     | . get job = 0 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,694 | INFO     | . initial setup = 1 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | . payload setup = 3 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | . stage-in = 0 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | . payload execution = 19703 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | . stage-out = 0 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | . log creation = 0 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,695 | INFO     | ..............................
[2025-12-16 02:42:48] 2025-12-16 01:42:03,982 | INFO     | 
[2025-12-16 02:42:48] 2025-12-16 01:42:03,982 | INFO     | job summary report
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | --------------------------------------------------
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | PanDA job id: 6929262114
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | task id: 47898763
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | errors: (none)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | pilot state: finished 
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | transexitcode: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | exeerrorcode: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | exeerrordiag: 
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | exitcode: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | exitmsg: OK
[2025-12-16 02:42:48] 2025-12-16 01:42:03,983 | INFO     | cpuconsumptiontime: 49225 s
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | nevents: 400
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | neventsw: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | pid: 1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | pgrp: 1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | corecount: 3
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | event service: False
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | sizes: {0: 2283947, 3: 2284209, 11: 2284237, 19711: 2317672, 19712: 2326670, 19714: 2326726, 19720: 2327048}
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | --------------------------------------------------
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | 
[2025-12-16 02:42:48] 2025-12-16 01:42:03,984 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-16 02:42:48] 2025-12-16 01:42:03,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | job 6929262114 has completed (purged errors)
[2025-12-16 02:42:48] 2025-12-16 01:42:03,999 | INFO     | overall cleanup function is called
[2025-12-16 02:42:48] 2025-12-16 01:42:05,003 | INFO     | --- collectZombieJob: --- 10, [1280287]
[2025-12-16 02:42:48] 2025-12-16 01:42:05,003 | INFO     | zombie collector waiting for pid 1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:05,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 02:42:48] 2025-12-16 01:42:05,003 | INFO     | collected zombie processes
[2025-12-16 02:42:48] 2025-12-16 01:42:05,003 | INFO     | will attempt to kill all subprocesses of pid=1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:05,082 | INFO     | process IDs to be killed: [1280287] (in reverse order)
[2025-12-16 02:42:48] 2025-12-16 01:42:05,111 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 02:42:48] 2025-12-16 01:42:05,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 02:42:48] 2025-12-16 01:42:05,113 | INFO     | did not find any defunct processes belonging to 1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:05,116 | INFO     | did not find any defunct processes belonging to 1280287
[2025-12-16 02:42:48] 2025-12-16 01:42:05,116 | INFO     | ready for new job
[2025-12-16 02:42:48] 2025-12-16 01:42:05,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 02:42:48] 2025-12-16 01:42:05,118 | INFO     | ***************************************
[2025-12-16 02:42:48] 2025-12-16 01:42:05,118 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 02:42:48] 2025-12-16 01:42:05,118 | INFO     | ***************************************
[2025-12-16 02:42:48] 2025-12-16 01:42:05,118 | INFO     | 
[2025-12-16 02:42:48] 2025-12-16 01:42:05,119 | INFO     | architecture information:
[2025-12-16 02:42:48] 2025-12-16 01:42:05,119 | INFO     | executing command: cat /etc/os-release
[2025-12-16 02:42:48] 2025-12-16 01:42:05,129 | INFO     | cat /etc/os-release:
[2025-12-16 02:42:48] NAME="CentOS Linux"
[2025-12-16 02:42:48] VERSION="7 (Core)"
[2025-12-16 02:42:48] ID="centos"
[2025-12-16 02:42:48] ID_LIKE="rhel fedora"
[2025-12-16 02:42:48] VERSION_ID="7"
[2025-12-16 02:42:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 02:42:48] ANSI_COLOR="0;31"
[2025-12-16 02:42:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 02:42:48] HOME_URL="https://www.centos.org/"
[2025-12-16 02:42:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 02:42:48] 
[2025-12-16 02:42:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 02:42:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 02:42:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 02:42:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 02:42:48] 
[2025-12-16 02:42:48] 2025-12-16 01:42:05,129 | INFO     | ***************************************
[2025-12-16 02:42:48] 2025-12-16 01:42:05,630 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-16 02:42:48] 2025-12-16 01:42:05,640 | INFO     | sufficient remaining disk space (80011591680 B)
[2025-12-16 02:42:48] 2025-12-16 01:42:05,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 02:42:48] 2025-12-16 01:42:05,640 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 02:42:48] 2025-12-16 01:42:05,640 | INFO     | update_server=False
[2025-12-16 02:42:48] 2025-12-16 01:42:05,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 02:42:48] 2025-12-16 01:42:05,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 02:42:48] 2025-12-16 01:42:05,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 02:42:48] 2025-12-16 01:42:05,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 02:42:48] 2025-12-16 01:42:05,833 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 02:42:48] 2025-12-16 01:42:05,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 02:42:48] 2025-12-16 01:42:05,833 | INFO     | will abort loop
[2025-12-16 02:42:48] 2025-12-16 01:42:05,926 | INFO     | all payload control threads have been joined
[2025-12-16 02:42:48] 2025-12-16 01:42:06,323 | INFO     | all data control threads have been joined
[2025-12-16 02:42:48] 2025-12-16 01:42:06,349 | INFO     | all job control threads have been joined
[2025-12-16 02:42:48] 2025-12-16 01:42:06,643 | INFO     | [job] queue monitor thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,646 | INFO     | [job] retrieve thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,690 | INFO     | [job] validate thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,836 | INFO     | [job] job monitor thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,846 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,930 | INFO     | [payload] control thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:06,964 | INFO     | [data] copytool_in thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,021 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,091 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,328 | INFO     | [data] control thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,355 | INFO     | [job] control thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,573 | INFO     | [payload] failed_post thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:07,789 | INFO     | [data] copytool_out thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:08,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 02:42:48] 2025-12-16 01:42:08,223 | INFO     | [payload] validate_post thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:12,091 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:16,693 | INFO     | job.realtimelogging is not enabled
[2025-12-16 02:42:48] 2025-12-16 01:42:17,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 02:42:48] 2025-12-16 01:42:35,835 | INFO     | PID=1273864 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 02:42:48] 2025-12-16 01:42:35,835 | INFO     | .. there are 2 such processes running
[2025-12-16 02:42:48] 2025-12-16 01:42:35,836 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 02:42:48] 2025-12-16 01:42:35,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 02:42:48] 2025-12-16 01:42:35,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 02:42:48] 2025-12-16 01:42:42,019 | INFO     | [monitor] cgroup control has ended
[2025-12-16 02:42:48] 2025-12-16 01:42:43,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113603381056)>', '<ExcThread(monitor, started 140112956479232)>']
[2025-12-16 02:42:48] 2025-12-16 01:42:43,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 02:42:48] 2025-12-16 01:42:43,866 | INFO     | [monitor] control thread has ended
[2025-12-16 02:42:48] 2025-12-16 01:42:48,341 | INFO     | all workflow threads have been joined
[2025-12-16 02:42:48] 2025-12-16 01:42:48,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 02:42:48] 2025-12-16 01:42:48,343 | INFO     | traces error code: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:48,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 02:42:48] 2025-12-16 01:42:48,442 [wrapper] ==== pilot stdout END ====
[2025-12-16 02:42:48] 2025-12-16 01:42:48,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 02:42:48] 2025-12-16 01:42:48,446 [wrapper] pilotpid: 1273864
[2025-12-16 02:42:48] 2025-12-16 01:42:48,447 [wrapper] Pilot exit status: 0
[2025-12-16 02:42:48] 2025-12-16 01:42:48,464 [wrapper] pandaids: 6929262114
[2025-12-16 02:42:48] 2025-12-16 01:42:48,482 [wrapper] cleanup supervisor_pilot 1363225 1273865
[2025-12-16 02:42:48] 2025-12-16 01:42:48,484 [wrapper] Test setup, not cleaning
[2025-12-16 02:42:48] 2025-12-16 01:42:48,486 [wrapper] apfmon messages muted
[2025-12-16 02:42:48] 2025-12-16 01:42:48,488 [wrapper] ==== wrapper stdout END ====
[2025-12-16 02:42:48] 2025-12-16 01:42:48,490 [wrapper] ==== wrapper stderr END ====
[2025-12-16 02:42:48]  *** Error codes and diagnostics ***
[2025-12-16 02:42:48]     "exeErrorCode": 0,
[2025-12-16 02:42:48]     "exeErrorDiag": "",
[2025-12-16 02:42:48]     "pilotErrorCode": 0,
[2025-12-16 02:42:48]     "pilotErrorDiag": "",
[2025-12-16 02:42:48]  *** Listing of results directory ***
[2025-12-16 02:42:48] insgesamt 448120
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc    579449 13. Dez 09:51 pilot3.tar.gz
[2025-12-16 02:42:48] -rwx------ 1 boinc boinc     36322 13. Dez 10:39 runpilot2-wrapper.sh
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc      5112 13. Dez 10:39 queuedata.json
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc       100 15. Dez 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 02:42:48] -rwxr-xr-x 1 boinc boinc      7986 15. Dez 21:12 run_atlas
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc       105 15. Dez 21:12 job.xml
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc      6743 15. Dez 21:13 init_data.xml
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc 226530742 15. Dez 21:13 EVNT.47898761._000037.pool.root.1
[2025-12-16 02:42:48] drwxrwx--x 2 boinc boinc      4096 15. Dez 21:13 shared
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc    592391 15. Dez 21:13 input.tar.gz
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc     15847 15. Dez 21:13 start_atlas.sh
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc         0 15. Dez 21:13 boinc_lockfile
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc      2502 15. Dez 21:13 pandaJob.out
[2025-12-16 02:42:48] -rw------- 1 boinc boinc        52 15. Dez 21:13 setup.sh.local
[2025-12-16 02:42:48] -rw------- 1 boinc boinc    994497 15. Dez 21:13 agis_schedconf.cvmfs.json
[2025-12-16 02:42:48] drwx------ 5 boinc boinc      4096 15. Dez 21:13 pilot3
[2025-12-16 02:42:48] -rw------- 1 boinc boinc 221906349 16. Dez 02:41 HITS.47898763._000907.pool.root.1
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc       530 16. Dez 02:41 boinc_task_state.xml
[2025-12-16 02:42:48] -rw------- 1 boinc boinc      1022 16. Dez 02:41 memory_monitor_summary.json
[2025-12-16 02:42:48] -rw------- 1 boinc boinc   1516240 16. Dez 02:41 agis_ddmendpoints.agis.ALL.json
[2025-12-16 02:42:48] -rw------- 1 boinc boinc    448217 16. Dez 02:41 log.47898763._000907.job.log.tgz.1
[2025-12-16 02:42:48] -rw------- 1 boinc boinc      7768 16. Dez 02:42 heartbeat.json
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc        28 16. Dez 02:42 wrapper_checkpoint.txt
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc      8192 16. Dez 02:42 boinc_mmap_file
[2025-12-16 02:42:48] -rw------- 1 boinc boinc        95 16. Dez 02:42 pilot_heartbeat.json
[2025-12-16 02:42:48] -rw------- 1 boinc boinc      5081 16. Dez 02:42 pilotlog.txt
[2025-12-16 02:42:48] -rw------- 1 boinc boinc   2810632 16. Dez 02:42 log.47898763._000907.job.log.1
[2025-12-16 02:42:48] -rw------- 1 boinc boinc       357 16. Dez 02:42 output.list
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc       620 16. Dez 02:42 runtime_log
[2025-12-16 02:42:48] -rw------- 1 boinc boinc   3276800 16. Dez 02:42 result.tar.gz
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc      9283 16. Dez 02:42 runtime_log.err
[2025-12-16 02:42:48] -rw------- 1 boinc boinc       652 16. Dez 02:42 B4OKDmnGbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmiSKDm45Rjzm.diag
[2025-12-16 02:42:48] -rw-r--r-- 1 boinc boinc     20968 16. Dez 02:42 stderr.txt
[2025-12-16 02:42:48] HITS file was successfully produced:
[2025-12-16 02:42:48] -rw------- 1 boinc boinc 221906349 16. Dez 02:41 shared/HITS.pool.root.1
[2025-12-16 02:42:48]  *** Contents of shared directory: ***
[2025-12-16 02:42:48] insgesamt 441732
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc 226530742 15. Dez 21:13 ATLAS.root_0
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc    592391 15. Dez 21:13 input.tar.gz
[2025-12-16 02:42:48] -rw-r--r-- 2 boinc boinc     15847 15. Dez 21:13 start_atlas.sh
[2025-12-16 02:42:48] -rw------- 1 boinc boinc 221906349 16. Dez 02:41 HITS.pool.root.1
[2025-12-16 02:42:48] -rw------- 1 boinc boinc   3276800 16. Dez 02:42 result.tar.gz
02:42:50 (1270154): run_atlas exited; CPU time 49431.212092
02:42:50 (1270154): called boinc_finish(0)

</stderr_txt>
]]>

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