Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:59 (3134035): wrapper (7.7.26015): starting
19:16:59 (3134035): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 19:16:59] Arguments: --nthreads 4
[2025-12-13 19:16:59] Threads: 4
[2025-12-13 19:16:59] Checking for CVMFS
[2025-12-13 19:16:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 19:16:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 19:16:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 19:17:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 19:17:00] 2.9.2.0 3092783 10 53596 153969 1 9 18989936 36864001 0 130560 0 108490 99.999 1338 89 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-13 19:17:00] CVMFS is ok
[2025-12-13 19:17:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 19:17:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 19:17:00] Further information can be found at the LHC@home message board.
[2025-12-13 19:17:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 19:17:00] Checking for apptainer binary...
[2025-12-13 19:17:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 19:17:00] Running /usr/bin/apptainer --version
[2025-12-13 19:17:00] apptainer version 1.4.1-1.1
[2025-12-13 19:17:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 19:17:00] thA325
[2025-12-13 19:17:00] apptainer works
[2025-12-13 19:17:00] Set ATHENA_PROC_NUMBER=4
[2025-12-13 19:17:00] Set ATHENA_CORE_NUMBER=4
[2025-12-13 19:17:00] Starting ATLAS job with PandaID=6929260348
[2025-12-13 19:17:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 19:21:25]  *** The last 200 lines of the pilot log: ***
[2025-12-13 19:21:25] 2025-12-13 18:20:21,755 | INFO     | ***************************************
[2025-12-13 19:21:25] 2025-12-13 18:20:22,259 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-13 19:21:25] 2025-12-13 18:20:22,277 | INFO     | sufficient remaining disk space (242295504896 B)
[2025-12-13 19:21:25] 2025-12-13 18:20:22,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 19:21:25] 2025-12-13 18:20:22,277 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 19:21:25] 2025-12-13 18:20:22,277 | INFO     | update_server=False
[2025-12-13 19:21:25] 2025-12-13 18:20:22,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 19:21:25] 2025-12-13 18:20:22,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:21:25] 2025-12-13 18:20:22,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:21:25] 2025-12-13 18:20:22,278 | INFO     | aborting loop
[2025-12-13 19:21:25] 2025-12-13 18:20:22,869 | INFO     | all job control threads have been joined
[2025-12-13 19:21:25] 2025-12-13 18:20:22,884 | INFO     | all data control threads have been joined
[2025-12-13 19:21:25] 2025-12-13 18:20:23,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 19:21:25] 2025-12-13 18:20:23,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 19:21:25] 2025-12-13 18:20:23,283 | INFO     | [job] retrieve thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,284 | INFO     | [job] queue monitor thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,284 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,284 | INFO     | [job] job monitor thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,345 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,531 | INFO     | [data] copytool_in thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,593 | INFO     | [payload] validate_post thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,725 | INFO     | all payload control threads have been joined
[2025-12-13 19:21:25] 2025-12-13 18:20:23,875 | INFO     | [job] control thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:23,890 | INFO     | [data] control thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:24,154 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:24,436 | INFO     | [payload] failed_post thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:24,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:24,676 | INFO     | [job] validate thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:24,731 | INFO     | [payload] control thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:25,266 | INFO     | [data] copytool_out thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:27,247 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 19:21:25] 2025-12-13 18:20:53,310 | INFO     | PID=3137831 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 19:21:25] 2025-12-13 18:20:53,310 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 19:21:25] 2025-12-13 18:20:53,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 19:21:25] 2025-12-13 18:20:53,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 19:21:25] 2025-12-13 18:21:18,545 | INFO     | [monitor] cgroup control has ended
[2025-12-13 19:21:25] 2025-12-13 18:21:20,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862456006464)>', '<ExcThread(monitor, started 139861331777280)>']
[2025-12-13 19:21:25] 2025-12-13 18:21:21,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 19:21:25] 2025-12-13 18:21:21,458 | INFO     | [monitor] control thread has ended
[2025-12-13 19:21:25] 2025-12-13 18:21:25,597 | INFO     | all workflow threads have been joined
[2025-12-13 19:21:25] 2025-12-13 18:21:25,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 19:21:25] 2025-12-13 18:21:25,597 | INFO     | traces error code: 0
[2025-12-13 19:21:25] 2025-12-13 18:21:25,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 19:21:25] 2025-12-13 18:21:25,665 [wrapper] ==== pilot stdout END ====
[2025-12-13 19:21:25] 2025-12-13 18:21:25,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 19:21:25] 2025-12-13 18:21:25,672 [wrapper] pilotpid: 3137831
[2025-12-13 19:21:25] 2025-12-13 18:21:25,676 [wrapper] Pilot exit status: 0
[2025-12-13 19:21:25] 2025-12-13 18:21:25,686 [wrapper] pandaids: 6929260348
[2025-12-13 19:21:25] 2025-12-13 18:21:25,707 [wrapper] cleanup supervisor_pilot 3137837 3137832
[2025-12-13 19:21:25] 2025-12-13 18:21:25,711 [wrapper] Test setup, not cleaning
[2025-12-13 19:21:25] 2025-12-13 18:21:25,715 [wrapper] apfmon messages muted
[2025-12-13 19:21:25] 2025-12-13 18:21:25,718 [wrapper] ==== wrapper stdout END ====
[2025-12-13 19:21:25] 2025-12-13 18:21:25,722 [wrapper] ==== wrapper stderr END ====
[2025-12-13 19:21:25]  *** Error codes and diagnostics ***
[2025-12-13 19:21:25]     "exeErrorCode": 65,
[2025-12-13 19:21:25]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-13 19:21:25]     "pilotErrorCode": 1305,
[2025-12-13 19:21:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-13 19:21:25]  *** Listing of results directory ***
[2025-12-13 19:21:25] total 222336
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      5112 Dec 13 10:38 queuedata.json
[2025-12-13 19:21:25] -rwx------ 1 boinc boinc     36322 Dec 13 10:38 runpilot2-wrapper.sh
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc       100 Dec 13 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 19:21:25] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 19:16 run_atlas
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc       105 Dec 13 19:16 job.xml
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc 223529446 Dec 13 19:16 EVNT.47898761._000011.pool.root.1
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc    592391 Dec 13 19:16 input.tar.gz
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc     15847 Dec 13 19:16 start_atlas.sh
[2025-12-13 19:21:25] drwxrwx--x 2 boinc boinc      4096 Dec 13 19:16 shared
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc         0 Dec 13 19:16 boinc_setup_complete
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      6368 Dec 13 19:16 init_data.xml
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc         0 Dec 13 19:16 boinc_lockfile
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      2501 Dec 13 19:17 pandaJob.out
[2025-12-13 19:21:25] -rw------- 1 boinc boinc    991736 Dec 13 19:17 agis_schedconf.cvmfs.json
[2025-12-13 19:21:25] -rw------- 1 boinc boinc   1516240 Dec 13 19:17 agis_ddmendpoints.agis.ALL.json
[2025-12-13 19:21:25] drwx------ 5 boinc boinc      4096 Dec 13 19:17 pilot3
[2025-12-13 19:21:25] -rw------- 1 boinc boinc       964 Dec 13 19:18 memory_monitor_summary.json
[2025-12-13 19:21:25] -rw------- 1 boinc boinc     33944 Dec 13 19:18 log.47898763._000253.job.log.tgz.1
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc       523 Dec 13 19:18 boinc_task_state.xml
[2025-12-13 19:21:25] -rw------- 1 boinc boinc        95 Dec 13 19:20 pilot_heartbeat.json
[2025-12-13 19:21:25] -rw------- 1 boinc boinc      8380 Dec 13 19:20 heartbeat.json
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      8192 Dec 13 19:21 boinc_mmap_file
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc        23 Dec 13 19:21 wrapper_checkpoint.txt
[2025-12-13 19:21:25] -rw------- 1 boinc boinc      4752 Dec 13 19:21 pilotlog.txt
[2025-12-13 19:21:25] -rw------- 1 boinc boinc     84903 Dec 13 19:21 log.47898763._000253.job.log.1
[2025-12-13 19:21:25] -rw------- 1 boinc boinc       188 Dec 13 19:21 output.list
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc       620 Dec 13 19:21 runtime_log
[2025-12-13 19:21:25] -rw------- 1 boinc boinc    143360 Dec 13 19:21 result.tar.gz
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      8744 Dec 13 19:21 runtime_log.err
[2025-12-13 19:21:25] -rw------- 1 boinc boinc       648 Dec 13 19:21 rgfMDmMGbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiZOKDmPnwj7m.diag
[2025-12-13 19:21:25] -rw-r--r-- 1 boinc boinc      8176 Dec 13 19:21 stderr.txt
[2025-12-13 19:21:25] No HITS result produced
[2025-12-13 19:21:25]  *** Contents of shared directory: ***
[2025-12-13 19:21:25] total 219032
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc 223529446 Dec 13 19:16 ATLAS.root_0
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc    592391 Dec 13 19:16 input.tar.gz
[2025-12-13 19:21:25] -rw-r--r-- 2 boinc boinc     15847 Dec 13 19:16 start_atlas.sh
[2025-12-13 19:21:25] -rw------- 1 boinc boinc    143360 Dec 13 19:21 result.tar.gz
19:21:27 (3134035): run_atlas exited; CPU time 28.349991
19:21:27 (3134035): called boinc_finish(0)

</stderr_txt>
]]>

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