Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:11:39 (5876): wrapper (7.7.26015): starting
13:11:39 (5876): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 13:11:39] Arguments: --nthreads 8
[2025-12-13 13:11:39] Threads: 8
[2025-12-13 13:11:39] Checking for CVMFS
[2025-12-13 13:11:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 13:11:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 13:11:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 13:11:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 13:11:40] 2.11.2.0 3643 90707 130104 153968 2 188 17117556 18432001 1833 130560 0 55774421 99.980 3461861 29292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 13:11:40] CVMFS is ok
[2025-12-13 13:11:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 13:11:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 13:11:40] Further information can be found at the LHC@home message board.
[2025-12-13 13:11:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 13:11:40] Checking for apptainer binary...
[2025-12-13 13:11:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 13:11:40] Running /usr/bin/apptainer --version
[2025-12-13 13:11:40] apptainer version 1.3.2-1.el7
[2025-12-13 13:11:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 13:11:41] c-206-15.aglt2.org
[2025-12-13 13:11:41] apptainer works
[2025-12-13 13:11:41] Set ATHENA_PROC_NUMBER=8
[2025-12-13 13:11:41] Set ATHENA_CORE_NUMBER=8
[2025-12-13 13:11:41] Starting ATLAS job with PandaID=6929243563
[2025-12-13 13:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:29:22]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:29:22] 2025-12-13 22:28:29,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:29:22] 2025-12-13 22:28:29,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:29:22] 2025-12-13 22:28:29,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:29:22] 2025-12-13 22:28:29,721 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:29:22] 2025-12-13 22:28:29,722 | INFO     | sum of square deviations: 4962187923.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,724 | INFO     | sum of deviations: 45868002029.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,724 | INFO     | mean x: 1765657192.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,725 | INFO     | mean y: 2471630.3055555555
[2025-12-13 17:29:22] 2025-12-13 22:28:29,725 | INFO     | intersect: -16318387020.29321
[2025-12-13 17:29:22] 2025-12-13 22:28:29,725 | INFO     | chi2: 1.5366792430802994
[2025-12-13 17:29:22] 2025-12-13 22:28:29,726 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,728 | INFO     | sum of deviations: 44626086407.00001
[2025-12-13 17:29:22] 2025-12-13 22:28:29,728 | INFO     | mean x: 1765657040.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,729 | INFO     | mean y: 2470976.129554656
[2025-12-13 17:29:22] 2025-12-13 22:28:29,729 | INFO     | intersect: -16860457082.578615
[2025-12-13 17:29:22] 2025-12-13 22:28:29,729 | INFO     | chi2: 1.5371986977071561
[2025-12-13 17:29:22] 2025-12-13 22:28:29,729 | INFO     | current chi2=1.5371986977071561 (change=-0.03380371207562535 %)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,730 | INFO     | right removable region: 246
[2025-12-13 17:29:22] 2025-12-13 22:28:29,730 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,733 | INFO     | sum of deviations: 5458369426.000003
[2025-12-13 17:29:22] 2025-12-13 22:28:29,733 | INFO     | mean x: 1765657345.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,733 | INFO     | mean y: 2492753.834008097
[2025-12-13 17:29:22] 2025-12-13 22:28:29,733 | INFO     | intersect: -2060070071.1635606
[2025-12-13 17:29:22] 2025-12-13 22:28:29,734 | INFO     | chi2: 0.11470321747757349
[2025-12-13 17:29:22] 2025-12-13 22:28:29,734 | INFO     | current chi2=0.11470321747757349 (change=92.53564346664507 %)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,734 | INFO     | sum of square deviations: 4394577280.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,737 | INFO     | sum of deviations: -6298335552.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,737 | INFO     | mean x: 1765657497.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,737 | INFO     | mean y: 2499202.012396694
[2025-12-13 17:29:22] 2025-12-13 22:28:29,737 | INFO     | intersect: 2533050533.8522487
[2025-12-13 17:29:22] 2025-12-13 22:28:29,738 | INFO     | chi2: 0.03313941831295512
[2025-12-13 17:29:22] 2025-12-13 22:28:29,738 | INFO     | current chi2=0.03313941831295512 (change=71.10855384729338 %)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,738 | INFO     | sum of square deviations: 4127772278.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,740 | INFO     | sum of deviations: -9086822605.000002
[2025-12-13 17:29:22] 2025-12-13 22:28:29,740 | INFO     | mean x: 1765657650.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,741 | INFO     | mean y: 2500773.130801688
[2025-12-13 17:29:22] 2025-12-13 22:28:29,741 | INFO     | intersect: 3889395874.448012
[2025-12-13 17:29:22] 2025-12-13 22:28:29,741 | INFO     | chi2: 0.015307447051284381
[2025-12-13 17:29:22] 2025-12-13 22:28:29,741 | INFO     | current chi2=0.015307447051284381 (change=53.808944663038105 %)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,741 | INFO     | sum of square deviations: 3871990738.0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | sum of deviations: -8387497468.499996
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | mean x: 1765657802.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | mean y: 2500354.4267241377
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | intersect: 3827264242.254499
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | chi2: 0.015250246196255587
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | current chi2=0.015250246196255587 (change=0.3736799143394399 %)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,743 | INFO     | left removable region: 40
[2025-12-13 17:29:22] 2025-12-13 22:28:29,744 | INFO     | sum of square deviations: 2710627567.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,745 | INFO     | sum of deviations: -2257607468.5000005
[2025-12-13 17:29:22] 2025-12-13 22:28:29,745 | INFO     | mean x: 1765658229.5
[2025-12-13 17:29:22] 2025-12-13 22:28:29,745 | INFO     | mean y: 2495802.723300971
[2025-12-13 17:29:22] 2025-12-13 22:28:29,745 | INFO     | intersect: 1473064188.2629304
[2025-12-13 17:29:22] 2025-12-13 22:28:29,745 | INFO     | chi2: 0.010409832453823058
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | current memory leak: -0.83 B/s (using 206 data points, chi2=0.01)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | could have reported an average CPU frequency of 2578 MHz (12 samples)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | ..............................
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | . Timing measurements:
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | . get job = 0 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | . initial setup = 2 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,746 | INFO     | . payload setup = 4 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,747 | INFO     | . stage-in = 0 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,747 | INFO     | . payload execution = 15364 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,747 | INFO     | . stage-out = 2 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,747 | INFO     | . log creation = 0 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,747 | INFO     | ..............................
[2025-12-13 17:29:22] 2025-12-13 22:28:29,823 | INFO     | 
[2025-12-13 17:29:22] 2025-12-13 22:28:29,823 | INFO     | job summary report
[2025-12-13 17:29:22] 2025-12-13 22:28:29,824 | INFO     | --------------------------------------------------
[2025-12-13 17:29:22] 2025-12-13 22:28:29,824 | INFO     | PanDA job id: 6929243563
[2025-12-13 17:29:22] 2025-12-13 22:28:29,824 | INFO     | task id: 47898782
[2025-12-13 17:29:22] 2025-12-13 22:28:29,824 | INFO     | errors: (none)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | pilot state: finished 
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | transexitcode: 0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | exeerrorcode: 0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | exeerrordiag: 
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | exitcode: 0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,825 | INFO     | exitmsg: OK
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | cpuconsumptiontime: 115950 s
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | nevents: 400
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | neventsw: 0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | pid: 16021
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | pgrp: 16021
[2025-12-13 17:29:22] 2025-12-13 22:28:29,826 | INFO     | corecount: 8
[2025-12-13 17:29:22] 2025-12-13 22:28:29,827 | INFO     | event service: False
[2025-12-13 17:29:22] 2025-12-13 22:28:29,827 | INFO     | sizes: {0: 2283751, 1: 2284006, 5: 2284268, 12: 2284324, 15373: 2315454, 15376: 2324480, 15377: 2324664, 15383: 2324858}
[2025-12-13 17:29:22] 2025-12-13 22:28:29,827 | INFO     | --------------------------------------------------
[2025-12-13 17:29:22] 2025-12-13 22:28:29,827 | INFO     | 
[2025-12-13 17:29:22] 2025-12-13 22:28:29,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:29:22] 2025-12-13 22:28:29,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:29:22] 2025-12-13 22:28:29,853 | INFO     | job 6929243563 has completed (purged errors)
[2025-12-13 17:29:22] 2025-12-13 22:28:29,853 | INFO     | overall cleanup function is called
[2025-12-13 17:29:22] 2025-12-13 22:28:30,861 | INFO     | --- collectZombieJob: --- 10, [16021]
[2025-12-13 17:29:22] 2025-12-13 22:28:30,862 | INFO     | zombie collector waiting for pid 16021
[2025-12-13 17:29:22] 2025-12-13 22:28:30,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:29:22] 2025-12-13 22:28:30,862 | INFO     | collected zombie processes
[2025-12-13 17:29:22] 2025-12-13 22:28:30,862 | INFO     | will attempt to kill all subprocesses of pid=16021
[2025-12-13 17:29:22] 2025-12-13 22:28:31,032 | INFO     | process IDs to be killed: [16021] (in reverse order)
[2025-12-13 17:29:22] 2025-12-13 22:28:31,089 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:29:22] 2025-12-13 22:28:31,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:29:22] 2025-12-13 22:28:31,095 | INFO     | did not find any defunct processes belonging to 16021
[2025-12-13 17:29:22] 2025-12-13 22:28:31,100 | INFO     | did not find any defunct processes belonging to 16021
[2025-12-13 17:29:22] 2025-12-13 22:28:31,101 | INFO     | ready for new job
[2025-12-13 17:29:22] 2025-12-13 22:28:31,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:29:22] 2025-12-13 22:28:31,103 | INFO     | ***************************************
[2025-12-13 17:29:22] 2025-12-13 22:28:31,103 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:29:22] 2025-12-13 22:28:31,103 | INFO     | ***************************************
[2025-12-13 17:29:22] 2025-12-13 22:28:31,104 | INFO     | 
[2025-12-13 17:29:22] 2025-12-13 22:28:31,105 | INFO     | architecture information:
[2025-12-13 17:29:22] 2025-12-13 22:28:31,105 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:29:22] 2025-12-13 22:28:31,118 | INFO     | cat /etc/os-release:
[2025-12-13 17:29:22] NAME="CentOS Linux"
[2025-12-13 17:29:22] VERSION="7 (Core)"
[2025-12-13 17:29:22] ID="centos"
[2025-12-13 17:29:22] ID_LIKE="rhel fedora"
[2025-12-13 17:29:22] VERSION_ID="7"
[2025-12-13 17:29:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:29:22] ANSI_COLOR="0;31"
[2025-12-13 17:29:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:29:22] HOME_URL="https://www.centos.org/"
[2025-12-13 17:29:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:29:22] 
[2025-12-13 17:29:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:29:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:29:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:29:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:29:22] 
[2025-12-13 17:29:22] 2025-12-13 22:28:31,119 | INFO     | ***************************************
[2025-12-13 17:29:22] 2025-12-13 22:28:31,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:29:22] 2025-12-13 22:28:31,637 | INFO     | sufficient remaining disk space (28210888704 B)
[2025-12-13 17:29:22] 2025-12-13 22:28:31,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:29:22] 2025-12-13 22:28:31,638 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:29:22] 2025-12-13 22:28:31,638 | INFO     | update_server=False
[2025-12-13 17:29:22] 2025-12-13 22:28:31,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:29:22] 2025-12-13 22:28:31,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:29:22] 2025-12-13 22:28:31,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:29:22] 2025-12-13 22:28:31,639 | INFO     | aborting loop
[2025-12-13 17:29:22] 2025-12-13 22:28:31,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:29:22] 2025-12-13 22:28:32,021 | INFO     | all job control threads have been joined
[2025-12-13 17:29:22] 2025-12-13 22:28:32,403 | INFO     | all payload control threads have been joined
[2025-12-13 17:29:22] 2025-12-13 22:28:32,621 | INFO     | all data control threads have been joined
[2025-12-13 17:29:22] 2025-12-13 22:28:32,644 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:32,645 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:32,645 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:32,715 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:32,733 | INFO     | [job] validate thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:32,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,026 | INFO     | [job] control thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,187 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,409 | INFO     | [payload] control thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,520 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,626 | INFO     | [data] control thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,645 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,791 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:29:22] 2025-12-13 22:28:33,985 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:33,989 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:28:37,991 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:29:22] 2025-12-13 22:29:01,963 | INFO     | PID=9537 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 17:29:22] 2025-12-13 22:29:01,963 | INFO     | .. there are 3 such processes running
[2025-12-13 17:29:22] 2025-12-13 22:29:01,963 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:29:22] 2025-12-13 22:29:01,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:29:22] 2025-12-13 22:29:01,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:29:22] 2025-12-13 22:29:16,650 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:29:22] 2025-12-13 22:29:17,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866687522624)>', '<ExcThread(monitor, started 139866247509760)>']
[2025-12-13 17:29:22] 2025-12-13 22:29:18,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:29:22] 2025-12-13 22:29:18,037 | INFO     | [monitor] control thread has ended
[2025-12-13 17:29:22] 2025-12-13 22:29:22,458 | INFO     | all workflow threads have been joined
[2025-12-13 17:29:22] 2025-12-13 22:29:22,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:29:22] 2025-12-13 22:29:22,477 | INFO     | traces error code: 0
[2025-12-13 17:29:22] 2025-12-13 22:29:22,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:29:22] 2025-12-13 22:29:22,620 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:29:22] 2025-12-13 22:29:22,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:29:22] 2025-12-13 22:29:22,625 [wrapper] pilotpid: 9537
[2025-12-13 17:29:22] 2025-12-13 22:29:22,628 [wrapper] Pilot exit status: 0
[2025-12-13 17:29:22] 2025-12-13 22:29:22,638 [wrapper] pandaids: 6929243563
[2025-12-13 17:29:22] 2025-12-13 22:29:22,668 [wrapper] cleanup supervisor_pilot 16311 9538
[2025-12-13 17:29:22] 2025-12-13 22:29:22,671 [wrapper] Test setup, not cleaning
[2025-12-13 17:29:22] 2025-12-13 22:29:22,673 [wrapper] apfmon messages muted
[2025-12-13 17:29:22] 2025-12-13 22:29:22,675 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:29:22] 2025-12-13 22:29:22,677 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:29:22]  *** Error codes and diagnostics ***
[2025-12-13 17:29:22]     "exeErrorCode": 0,
[2025-12-13 17:29:22]     "exeErrorDiag": "",
[2025-12-13 17:29:22]     "pilotErrorCode": 0,
[2025-12-13 17:29:22]     "pilotErrorDiag": "",
[2025-12-13 17:29:22]  *** Listing of results directory ***
[2025-12-13 17:29:22] total 413584
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 17:29:22] -rwx------ 1 boincer umatlas     36322 Dec 13 04:03 runpilot2-wrapper.sh
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 04:03 queuedata.json
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas       100 Dec 13 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:29:22] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 13:11 run_atlas
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas       105 Dec 13 13:11 job.xml
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas 215125271 Dec 13 13:11 EVNT.47898779._000076.pool.root.1
[2025-12-13 17:29:22] drwxrwx--x 2 boincer umatlas      4096 Dec 13 13:11 shared
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 13:11 input.tar.gz
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 13:11 start_atlas.sh
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas         0 Dec 13 13:11 boinc_lockfile
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas      2521 Dec 13 13:11 pandaJob.out
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas        57 Dec 13 13:11 setup.sh.local
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas    991736 Dec 13 13:11 agis_schedconf.cvmfs.json
[2025-12-13 17:29:22] drwx------ 5 boincer umatlas      4096 Dec 13 13:11 pilot3
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 17:20 init_data.xml
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas 199221228 Dec 13 17:27 HITS.47898782._001642.pool.root.1
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas       532 Dec 13 17:28 boinc_task_state.xml
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas        95 Dec 13 17:28 pilot_heartbeat.json
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas      1053 Dec 13 17:28 memory_monitor_summary.json
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas   1516240 Dec 13 17:28 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas    479264 Dec 13 17:28 log.47898782._001642.job.log.tgz.1
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas      7852 Dec 13 17:28 heartbeat.json
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas        29 Dec 13 17:29 wrapper_checkpoint.txt
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:29 boinc_mmap_file
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas      4820 Dec 13 17:29 pilotlog.txt
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas   2142624 Dec 13 17:29 log.47898782._001642.job.log.1
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas       357 Dec 13 17:29 output.list
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:29 runtime_log
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas   2641920 Dec 13 17:29 result.tar.gz
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas       663 Dec 13 17:29 Yc7LDmhiao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvVSKDmTDFNum.diag
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 17:29 runtime_log.err
[2025-12-13 17:29:22] -rw-r--r-- 1 boincer umatlas     20899 Dec 13 17:29 stderr.txt
[2025-12-13 17:29:22] HITS file was successfully produced:
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas 199221228 Dec 13 17:27 shared/HITS.pool.root.1
[2025-12-13 17:29:22]  *** Contents of shared directory: ***
[2025-12-13 17:29:22] total 407816
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas 215125271 Dec 13 13:11 ATLAS.root_0
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas    592384 Dec 13 13:11 input.tar.gz
[2025-12-13 17:29:22] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 13:11 start_atlas.sh
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas 199221228 Dec 13 17:27 HITS.pool.root.1
[2025-12-13 17:29:22] -rw------- 1 boincer umatlas   2641920 Dec 13 17:29 result.tar.gz
17:29:24 (5876): run_atlas exited; CPU time 116149.197870
17:29:24 (5876): called boinc_finish(0)

</stderr_txt>
]]>

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