Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:14:33 (2858097): wrapper (7.7.26015): starting
16:14:33 (2858097): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 16:14:33] Arguments: --nthreads 9
[2025-12-13 16:14:33] Threads: 9
[2025-12-13 16:14:33] Checking for CVMFS
[2025-12-13 16:14:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:14:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:14:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:14:55] 2.13.3.0 13172 55057 373088 153972 0 470 28997873 32935936 38810 16776704 0 281998125 99.466 369702269 34205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 16:14:55] CVMFS is ok
[2025-12-13 16:14:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 16:14:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 16:14:55] Further information can be found at the LHC@home message board.
[2025-12-13 16:14:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:14:55] Checking for apptainer binary...
[2025-12-13 16:14:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:14:55] Running /usr/bin/apptainer --version
[2025-12-13 16:14:55] apptainer version 1.4.5-2.el9
[2025-12-13 16:14:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:14:56] c6-6-8-3.aglt2.org
[2025-12-13 16:14:56] apptainer works
[2025-12-13 16:14:56] Set ATHENA_PROC_NUMBER=9
[2025-12-13 16:14:56] Set ATHENA_CORE_NUMBER=9
[2025-12-13 16:14:56] Starting ATLAS job with PandaID=6929263144
[2025-12-13 16:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 22:41:57]  *** The last 200 lines of the pilot log: ***
[2025-12-13 22:41:57] 2025-12-14 03:40:41,581 | INFO     | monitor loop #1295: job 0:6929263144 is in state 'finished'
[2025-12-13 22:41:57] 2025-12-14 03:40:41,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:41:57] 2025-12-14 03:40:42,809 | INFO     | time since job start (23075s) is within the limit (174528.0s)
[2025-12-13 22:41:57] 2025-12-14 03:40:44,088 | INFO     | monitor loop #1296: job 0:6929263144 is in state 'finished'
[2025-12-13 22:41:57] 2025-12-14 03:40:44,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:41:57] 2025-12-14 03:40:44,817 | INFO     | time since job start (23077s) is within the limit (174528.0s)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,395 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 22:41:57] 2025-12-14 03:40:46,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2647.590385416667
[2025-12-13 22:41:57] 2025-12-14 03:40:46,459 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929263144/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,460 | INFO     | extracted standard info from prmon json
[2025-12-13 22:41:57] 2025-12-14 03:40:46,460 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 22:41:57] 2025-12-14 03:40:46,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 22:41:57] 2025-12-14 03:40:46,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 22:41:57] 2025-12-14 03:40:46,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 22:41:57] 2025-12-14 03:40:46,486 | INFO     | fitting pss+swap vs Time
[2025-12-13 22:41:57] 2025-12-14 03:40:46,487 | INFO     | sum of square deviations: 16484050718.212725
[2025-12-13 22:41:57] 2025-12-14 03:40:46,563 | INFO     | sum of deviations: 43038627001.23407
[2025-12-13 22:41:57] 2025-12-14 03:40:46,563 | INFO     | mean x: 1765672143.8085105
[2025-12-13 22:41:57] 2025-12-14 03:40:46,682 | INFO     | mean y: 2546005.364361702
[2025-12-13 22:41:57] 2025-12-14 03:40:46,683 | INFO     | intersect: -4607492273.629918
[2025-12-13 22:41:57] 2025-12-14 03:40:46,683 | INFO     | chi2: 4.274480651569215
[2025-12-13 22:41:57] 2025-12-14 03:40:46,684 | INFO     | sum of square deviations: 15835195059.353144
[2025-12-13 22:41:57] 2025-12-14 03:40:46,690 | INFO     | monitor loop #1297: job 0:6929263144 is in state 'finished'
[2025-12-13 22:41:57] 2025-12-14 03:40:46,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,692 | INFO     | sum of deviations: 66975612993.92179
[2025-12-13 22:41:57] 2025-12-14 03:40:46,692 | INFO     | mean x: 1765671991.309973
[2025-12-13 22:41:57] 2025-12-14 03:40:46,693 | INFO     | mean y: 2551569.18328841
[2025-12-13 22:41:57] 2025-12-14 03:40:46,693 | INFO     | intersect: -7465431207.216733
[2025-12-13 22:41:57] 2025-12-14 03:40:46,693 | INFO     | chi2: 3.5792167080453288
[2025-12-13 22:41:57] 2025-12-14 03:40:46,693 | INFO     | current chi2=3.5792167080453288 (change=16.265460068666968 %)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,693 | INFO     | right removable region: 370
[2025-12-13 22:41:57] 2025-12-14 03:40:46,694 | INFO     | sum of square deviations: 15835170171.353138
[2025-12-13 22:41:57] 2025-12-14 03:40:46,706 | INFO     | sum of deviations: -62953683980.11322
[2025-12-13 22:41:57] 2025-12-14 03:40:46,706 | INFO     | mean x: 1765672296.309973
[2025-12-13 22:41:57] 2025-12-14 03:40:46,706 | INFO     | mean y: 2570871.679245283
[2025-12-13 22:41:57] 2025-12-14 03:40:46,706 | INFO     | intersect: 7022108682.231266
[2025-12-13 22:41:57] 2025-12-14 03:40:46,707 | INFO     | chi2: 1.3483648639055699
[2025-12-13 22:41:57] 2025-12-14 03:40:46,707 | INFO     | current chi2=1.3483648639055699 (change=68.45546924137864 %)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,716 | INFO     | sum of square deviations: 15203523253.366184
[2025-12-13 22:41:57] 2025-12-14 03:40:46,719 | INFO     | sum of deviations: -93067772046.99992
[2025-12-13 22:41:57] 2025-12-14 03:40:46,727 | INFO     | mean x: 1765672448.8142076
[2025-12-13 22:41:57] 2025-12-14 03:40:46,728 | INFO     | mean y: 2578120.0
[2025-12-13 22:41:57] 2025-12-14 03:40:46,728 | INFO     | intersect: 10811072850.951618
[2025-12-13 22:41:57] 2025-12-14 03:40:46,728 | INFO     | chi2: 1.0444574485500318
[2025-12-13 22:41:57] 2025-12-14 03:40:46,728 | INFO     | current chi2=1.0444574485500318 (change=22.538959853586164 %)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,728 | INFO     | left removable region: 20
[2025-12-13 22:41:57] 2025-12-14 03:40:46,729 | INFO     | sum of square deviations: 13295567752.36863
[2025-12-13 22:41:57] 2025-12-14 03:40:46,740 | INFO     | sum of deviations: -63517879105.14006
[2025-12-13 22:41:57] 2025-12-14 03:40:46,741 | INFO     | mean x: 1765672570.8257143
[2025-12-13 22:41:57] 2025-12-14 03:40:46,741 | INFO     | mean y: 2583121.26
[2025-12-13 22:41:57] 2025-12-14 03:40:46,741 | INFO     | intersect: 8437858619.216042
[2025-12-13 22:41:57] 2025-12-14 03:40:46,741 | INFO     | chi2: 0.2617402051053234
[2025-12-13 22:41:57] 2025-12-14 03:40:46,742 | INFO     | current memory leak: -4.78 B/s (using 350 data points, chi2=0.26)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,742 | INFO     | could have reported an average CPU frequency of 2684 MHz (16 samples)
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | ..............................
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . Timing measurements:
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . get job = 0 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . initial setup = 7 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . payload setup = 41 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . stage-in = 0 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . payload execution = 22930 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,743 | INFO     | . stage-out = 5 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,751 | INFO     | . log creation = 0 s
[2025-12-13 22:41:57] 2025-12-14 03:40:46,751 | INFO     | ..............................
[2025-12-13 22:41:57] 2025-12-14 03:40:46,833 | INFO     | time since job start (23079s) is within the limit (174528.0s)
[2025-12-13 22:41:57] 2025-12-14 03:40:47,193 | INFO     | 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | job summary report
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | --------------------------------------------------
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | PanDA job id: 6929263144
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | task id: 47898763
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | errors: (none)
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | pilot state: finished 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | transexitcode: 0
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | exeerrorcode: 0
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | exeerrordiag: 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,194 | INFO     | exitcode: 0
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | exitmsg: OK
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | cpuconsumptiontime: 65242 s
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | nevents: 400
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | neventsw: 0
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | pid: 2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | pgrp: 2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | corecount: 9
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | event service: False
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | sizes: {0: 2283123, 1: 2283808, 2: 2284007, 3: 2284007, 14: 2284035, 25: 2284063, 34: 2284481, 35: 2284509, 22976: 2318877, 22977: 2318876, 22983: 2327930, 22984: 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | --------------------------------------------------
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | 
[2025-12-13 22:41:57] 2025-12-14 03:40:47,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 22:41:57] 2025-12-14 03:40:47,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | job 6929263144 has completed (purged errors)
[2025-12-13 22:41:57] 2025-12-14 03:40:47,311 | INFO     | overall cleanup function is called
[2025-12-13 22:41:57] 2025-12-14 03:40:48,325 | INFO     | --- collectZombieJob: --- 10, [2876239]
[2025-12-13 22:41:57] 2025-12-14 03:40:48,325 | INFO     | zombie collector waiting for pid 2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:48,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 22:41:57] 2025-12-14 03:40:48,326 | INFO     | collected zombie processes
[2025-12-13 22:41:57] 2025-12-14 03:40:48,326 | INFO     | will attempt to kill all subprocesses of pid=2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:49,591 | INFO     | process IDs to be killed: [2876239] (in reverse order)
[2025-12-13 22:41:57] 2025-12-14 03:40:50,437 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 22:41:57] 2025-12-14 03:40:50,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 22:41:57] 2025-12-14 03:40:50,462 | INFO     | did not find any defunct processes belonging to 2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:50,484 | INFO     | did not find any defunct processes belonging to 2876239
[2025-12-13 22:41:57] 2025-12-14 03:40:50,485 | INFO     | ready for new job
[2025-12-13 22:41:57] 2025-12-14 03:40:50,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 22:41:57] 2025-12-14 03:40:50,489 | INFO     | ***************************************
[2025-12-13 22:41:57] 2025-12-14 03:40:50,489 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 22:41:57] 2025-12-14 03:40:50,489 | INFO     | ***************************************
[2025-12-13 22:41:57] 2025-12-14 03:40:50,490 | INFO     | 
[2025-12-13 22:41:57] 2025-12-14 03:40:50,495 | INFO     | architecture information:
[2025-12-13 22:41:57] 2025-12-14 03:40:50,499 | INFO     | executing command: cat /etc/os-release
[2025-12-13 22:41:57] 2025-12-14 03:40:50,600 | INFO     | cat /etc/os-release:
[2025-12-13 22:41:57] NAME="CentOS Linux"
[2025-12-13 22:41:57] VERSION="7 (Core)"
[2025-12-13 22:41:57] ID="centos"
[2025-12-13 22:41:57] ID_LIKE="rhel fedora"
[2025-12-13 22:41:57] VERSION_ID="7"
[2025-12-13 22:41:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 22:41:57] ANSI_COLOR="0;31"
[2025-12-13 22:41:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 22:41:57] HOME_URL="https://www.centos.org/"
[2025-12-13 22:41:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 22:41:57] 
[2025-12-13 22:41:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 22:41:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 22:41:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 22:41:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 22:41:57] 
[2025-12-13 22:41:57] 2025-12-14 03:40:50,601 | INFO     | ***************************************
[2025-12-13 22:41:57] 2025-12-14 03:40:51,105 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 22:41:57] 2025-12-14 03:40:51,152 | INFO     | sufficient remaining disk space (94240768000 B)
[2025-12-13 22:41:57] 2025-12-14 03:40:51,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 22:41:57] 2025-12-14 03:40:51,152 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 22:41:57] 2025-12-14 03:40:51,152 | INFO     | update_server=False
[2025-12-13 22:41:57] 2025-12-14 03:40:51,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 22:41:57] 2025-12-14 03:40:51,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:41:57] 2025-12-14 03:40:51,153 | INFO     | aborting loop
[2025-12-13 22:41:57] 2025-12-14 03:40:51,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 22:41:57] 2025-12-14 03:40:51,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 22:41:57] 2025-12-14 03:40:52,064 | INFO     | all job control threads have been joined
[2025-12-13 22:41:57] 2025-12-14 03:40:52,070 | INFO     | all payload control threads have been joined
[2025-12-13 22:41:57] 2025-12-14 03:40:52,143 | INFO     | all data control threads have been joined
[2025-12-13 22:41:57] 2025-12-14 03:40:52,158 | INFO     | [job] retrieve thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,159 | INFO     | [job] job monitor thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:41:57] 2025-12-14 03:40:52,235 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,236 | INFO     | [data] copytool_in thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,236 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,237 | INFO     | [job] validate thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:52,237 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,070 | INFO     | [job] control thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,078 | INFO     | [payload] control thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,166 | INFO     | [data] control thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,216 | INFO     | [job] queue monitor thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,217 | INFO     | [payload] failed_post thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,218 | INFO     | [payload] validate_post thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:53,492 | INFO     | [data] copytool_out thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:40:55,162 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 22:41:57] 2025-12-14 03:41:23,365 | INFO     | PID=2867041 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 22:41:57] 2025-12-14 03:41:23,367 | INFO     | .. there are 37 such processes running
[2025-12-13 22:41:57] 2025-12-14 03:41:23,367 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 22:41:57] 2025-12-14 03:41:23,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 22:41:57] 2025-12-14 03:41:23,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 22:41:57] 2025-12-14 03:41:47,746 | INFO     | [monitor] cgroup control has ended
[2025-12-13 22:41:57] 2025-12-14 03:41:49,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787531151168)>', '<ExcThread(monitor, started 139787176482560)>']
[2025-12-13 22:41:57] 2025-12-14 03:41:50,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 22:41:57] 2025-12-14 03:41:50,588 | INFO     | [monitor] control thread has ended
[2025-12-13 22:41:57] 2025-12-14 03:41:54,874 | INFO     | all workflow threads have been joined
[2025-12-13 22:41:57] 2025-12-14 03:41:54,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 22:41:57] 2025-12-14 03:41:54,877 | INFO     | traces error code: 0
[2025-12-13 22:41:57] 2025-12-14 03:41:54,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 22:41:57] 2025-12-14 03:41:56,190 [wrapper] ==== pilot stdout END ====
[2025-12-13 22:41:57] 2025-12-14 03:41:56,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 22:41:57] 2025-12-14 03:41:56,195 [wrapper] pilotpid: 2867041
[2025-12-13 22:41:57] 2025-12-14 03:41:56,207 [wrapper] Pilot exit status: 0
[2025-12-13 22:41:57] 2025-12-14 03:41:56,302 [wrapper] pandaids: 6929263144
[2025-12-13 22:41:57] 2025-12-14 03:41:56,972 [wrapper] cleanup supervisor_pilot  232062 2867042
[2025-12-13 22:41:57] 2025-12-14 03:41:56,977 [wrapper] Test setup, not cleaning
[2025-12-13 22:41:57] 2025-12-14 03:41:56,984 [wrapper] apfmon messages muted
[2025-12-13 22:41:57] 2025-12-14 03:41:56,987 [wrapper] ==== wrapper stdout END ====
[2025-12-13 22:41:57] 2025-12-14 03:41:56,990 [wrapper] ==== wrapper stderr END ====
[2025-12-13 22:41:57]  *** Error codes and diagnostics ***
[2025-12-13 22:41:57]     "exeErrorCode": 0,
[2025-12-13 22:41:57]     "exeErrorDiag": "",
[2025-12-13 22:41:57]     "pilotErrorCode": 0,
[2025-12-13 22:41:57]     "pilotErrorDiag": "",
[2025-12-13 22:41:57]  *** Listing of results directory ***
[2025-12-13 22:41:57] total 443000
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 22:41:57] -rwx------. 1 boincer umatlas     36322 Dec 13 04:31 runpilot2-wrapper.sh
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 04:31 queuedata.json
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas       100 Dec 13 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 22:41:57] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 16:14 run_atlas
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas       105 Dec 13 16:14 job.xml
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas 222956385 Dec 13 16:14 EVNT.47898761._000049.pool.root.1
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 16:14 start_atlas.sh
[2025-12-13 22:41:57] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 16:14 shared
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas    592392 Dec 13 16:14 input.tar.gz
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas         0 Dec 13 16:14 boinc_lockfile
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas      2504 Dec 13 16:14 pandaJob.out
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas        57 Dec 13 16:14 setup.sh.local
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas    991736 Dec 13 16:16 agis_schedconf.cvmfs.json
[2025-12-13 22:41:57] drwx------. 5 boincer umatlas      4096 Dec 13 16:16 pilot3
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas 220159411 Dec 13 22:38 HITS.47898763._001211.pool.root.1
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas       531 Dec 13 22:38 boinc_task_state.xml
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas      1043 Dec 13 22:40 memory_monitor_summary.json
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas   1516240 Dec 13 22:40 agis_ddmendpoints.agis.ALL.json
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas    564887 Dec 13 22:40 log.47898763._001211.job.log.tgz.1
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas        95 Dec 13 22:40 pilot_heartbeat.json
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas      7817 Dec 13 22:40 heartbeat.json
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas      6878 Dec 13 22:40 init_data.xml
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas        28 Dec 13 22:41 wrapper_checkpoint.txt
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 22:41 boinc_mmap_file
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas      4824 Dec 13 22:41 pilotlog.txt
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas   2735323 Dec 13 22:41 log.47898763._001211.job.log.1
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas       357 Dec 13 22:41 output.list
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas       620 Dec 13 22:41 runtime_log
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas   3317760 Dec 13 22:41 result.tar.gz
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas       658 Dec 13 22:41 sbrMDmF9ao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0XOKDmx33iOn.diag
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 22:41 runtime_log.err
[2025-12-13 22:41:57] -rw-r--r--. 1 boincer umatlas     21441 Dec 13 22:41 stderr.txt
[2025-12-13 22:41:57] HITS file was successfully produced:
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas 220159411 Dec 13 22:38 shared/HITS.pool.root.1
[2025-12-13 22:41:57]  *** Contents of shared directory: ***
[2025-12-13 22:41:57] total 436576
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas 222956385 Dec 13 16:14 ATLAS.root_0
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 16:14 start_atlas.sh
[2025-12-13 22:41:57] -rw-r--r--. 2 boincer umatlas    592392 Dec 13 16:14 input.tar.gz
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas 220159411 Dec 13 22:38 HITS.pool.root.1
[2025-12-13 22:41:57] -rw-------. 1 boincer umatlas   3317760 Dec 13 22:41 result.tar.gz
22:41:59 (2858097): run_atlas exited; CPU time 66550.732067
22:41:59 (2858097): called boinc_finish(0)

</stderr_txt>
]]>

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