Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:55:47 (25715): wrapper (7.7.26015): starting
12:55:47 (25715): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 12:55:47] Arguments: --nthreads 8
[2025-12-13 12:55:47] Threads: 8
[2025-12-13 12:55:47] Checking for CVMFS
[2025-12-13 12:55:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 12:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 12:55:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 12:55:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 12:55:47] 2.11.2.0 11495 142508 135280 153968 3 188 15627543 18432001 1833 130560 0 98948292 99.977 5794450 26402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 12:55:47] CVMFS is ok
[2025-12-13 12:55:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 12:55:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 12:55:47] Further information can be found at the LHC@home message board.
[2025-12-13 12:55:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 12:55:47] Checking for apptainer binary...
[2025-12-13 12:55:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 12:55:47] Running /usr/bin/apptainer --version
[2025-12-13 12:55:47] apptainer version 1.3.2-1.el7
[2025-12-13 12:55:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 12:55:48] c-206-31.aglt2.org
[2025-12-13 12:55:48] apptainer works
[2025-12-13 12:55:48] Set ATHENA_PROC_NUMBER=8
[2025-12-13 12:55:48] Set ATHENA_CORE_NUMBER=8
[2025-12-13 12:55:48] Starting ATLAS job with PandaID=6929244684
[2025-12-13 12:55:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:05:29]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:05:29] 2025-12-13 22:04:21,717 | INFO     | intersect: -18038495547.06003
[2025-12-13 17:05:29] 2025-12-13 22:04:21,717 | INFO     | chi2: 1.4320724520588213
[2025-12-13 17:05:29] 2025-12-13 22:04:21,718 | INFO     | current chi2=1.4320724520588213 (change=-0.02770587344174864 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,718 | INFO     | right removable region: 238
[2025-12-13 17:05:29] 2025-12-13 22:04:21,718 | INFO     | sum of square deviations: 4233158440.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,719 | INFO     | sum of deviations: 6953259764.999999
[2025-12-13 17:05:29] 2025-12-13 22:04:21,719 | INFO     | mean x: 1765656148.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,720 | INFO     | mean y: 2486064.4853556487
[2025-12-13 17:05:29] 2025-12-13 22:04:21,720 | INFO     | intersect: -2897728049.0958223
[2025-12-13 17:05:29] 2025-12-13 22:04:21,720 | INFO     | chi2: 0.04025079461601209
[2025-12-13 17:05:29] 2025-12-13 22:04:21,720 | INFO     | current chi2=0.04025079461601209 (change=97.18855380589544 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,720 | INFO     | sum of square deviations: 3972995422.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | sum of deviations: 2704821099.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | mean x: 1765656300.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | mean y: 2488524.9786324785
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | intersect: -1199572869.054477
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | chi2: 0.01554927427063764
[2025-12-13 17:05:29] 2025-12-13 22:04:21,722 | INFO     | current chi2=0.01554927427063764 (change=61.369025334838945 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,723 | INFO     | sum of square deviations: 3723716330.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,724 | INFO     | sum of deviations: 5556372636.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,724 | INFO     | mean x: 1765656453.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,724 | INFO     | mean y: 2486778.2052401747
[2025-12-13 17:05:29] 2025-12-13 22:04:21,724 | INFO     | intersect: -2632151397.9057794
[2025-12-13 17:05:29] 2025-12-13 22:04:21,725 | INFO     | chi2: 0.009204669911859852
[2025-12-13 17:05:29] 2025-12-13 22:04:21,725 | INFO     | current chi2=0.009204669911859852 (change=40.8032185190699 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,725 | INFO     | sum of square deviations: 3485088600.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,726 | INFO     | sum of deviations: 7951591864.999999
[2025-12-13 17:05:29] 2025-12-13 22:04:21,726 | INFO     | mean x: 1765656605.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,726 | INFO     | mean y: 2485258.089285714
[2025-12-13 17:05:29] 2025-12-13 22:04:21,727 | INFO     | intersect: -4026043801.595829
[2025-12-13 17:05:29] 2025-12-13 22:04:21,727 | INFO     | chi2: 0.0010908327644824137
[2025-12-13 17:05:29] 2025-12-13 22:04:21,727 | INFO     | current chi2=0.0010908327644824137 (change=88.14913761245346 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,727 | INFO     | sum of square deviations: 3256879670.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,728 | INFO     | sum of deviations: 6798604025.000001
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | mean x: 1765656758.0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | mean y: 2486027.621004566
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | intersect: -3683250738.2409205
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | chi2: 0.000769950513662544
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | current chi2=0.000769950513662544 (change=29.416264460311137 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,729 | INFO     | sum of square deviations: 3038856977.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | sum of deviations: 5901244767.499999
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | mean x: 1765656910.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | mean y: 2486654.2570093456
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | intersect: -3426293864.6801767
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | chi2: 0.0006000828006679751
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | current chi2=0.0006000828006679751 (change=22.062159837589114 %)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,731 | INFO     | left removable region: 60
[2025-12-13 17:05:29] 2025-12-13 22:04:21,732 | INFO     | sum of square deviations: 1748737904.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,732 | INFO     | sum of deviations: 2431252447.5000005
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | mean x: 1765657642.5
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | mean y: 2489108.5786516853
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | intersect: -2452286677.849214
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | chi2: 0.0002618240664266408
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | current memory leak: 1.39 B/s (using 178 data points, chi2=0.00)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,733 | INFO     | could have reported an average CPU frequency of 2534 MHz (12 samples)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | ..............................
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . Timing measurements:
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . get job = 0 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . initial setup = 2 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . payload setup = 4 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . stage-in = 0 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . payload execution = 14872 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . stage-out = 1 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,734 | INFO     | . log creation = 0 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,735 | INFO     | ..............................
[2025-12-13 17:05:29] 2025-12-13 22:04:21,824 | INFO     | 
[2025-12-13 17:05:29] 2025-12-13 22:04:21,824 | INFO     | job summary report
[2025-12-13 17:05:29] 2025-12-13 22:04:21,824 | INFO     | --------------------------------------------------
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | PanDA job id: 6929244684
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | task id: 47898782
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | errors: (none)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | pilot state: finished 
[2025-12-13 17:05:29] 2025-12-13 22:04:21,825 | INFO     | transexitcode: 0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | exeerrorcode: 0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | exeerrordiag: 
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | exitcode: 0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | exitmsg: OK
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | cpuconsumptiontime: 113871 s
[2025-12-13 17:05:29] 2025-12-13 22:04:21,826 | INFO     | nevents: 400
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | neventsw: 0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | pid: 3676
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | pgrp: 3676
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | corecount: 8
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | event service: False
[2025-12-13 17:05:29] 2025-12-13 22:04:21,827 | INFO     | sizes: {0: 2283807, 1: 2284006, 4: 2284268, 12: 2284296, 14880: 2315285, 14883: 2324283, 14885: 2324467, 14888: 2324661}
[2025-12-13 17:05:29] 2025-12-13 22:04:21,828 | INFO     | --------------------------------------------------
[2025-12-13 17:05:29] 2025-12-13 22:04:21,828 | INFO     | 
[2025-12-13 17:05:29] 2025-12-13 22:04:21,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | job 6929244684 has completed (purged errors)
[2025-12-13 17:05:29] 2025-12-13 22:04:21,849 | INFO     | overall cleanup function is called
[2025-12-13 17:05:29] 2025-12-13 22:04:22,856 | INFO     | --- collectZombieJob: --- 10, [3676]
[2025-12-13 17:05:29] 2025-12-13 22:04:22,856 | INFO     | zombie collector waiting for pid 3676
[2025-12-13 17:05:29] 2025-12-13 22:04:22,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:05:29] 2025-12-13 22:04:22,856 | INFO     | collected zombie processes
[2025-12-13 17:05:29] 2025-12-13 22:04:22,856 | INFO     | will attempt to kill all subprocesses of pid=3676
[2025-12-13 17:05:29] 2025-12-13 22:04:22,961 | INFO     | process IDs to be killed: [3676] (in reverse order)
[2025-12-13 17:05:29] 2025-12-13 22:04:23,001 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:05:29] 2025-12-13 22:04:23,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:05:29] 2025-12-13 22:04:23,004 | INFO     | did not find any defunct processes belonging to 3676
[2025-12-13 17:05:29] 2025-12-13 22:04:23,007 | INFO     | did not find any defunct processes belonging to 3676
[2025-12-13 17:05:29] 2025-12-13 22:04:23,007 | INFO     | ready for new job
[2025-12-13 17:05:29] 2025-12-13 22:04:23,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:05:29] 2025-12-13 22:04:23,008 | INFO     | ***************************************
[2025-12-13 17:05:29] 2025-12-13 22:04:23,009 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:05:29] 2025-12-13 22:04:23,009 | INFO     | ***************************************
[2025-12-13 17:05:29] 2025-12-13 22:04:23,009 | INFO     | 
[2025-12-13 17:05:29] 2025-12-13 22:04:23,010 | INFO     | architecture information:
[2025-12-13 17:05:29] 2025-12-13 22:04:23,010 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:05:29] 2025-12-13 22:04:23,019 | INFO     | cat /etc/os-release:
[2025-12-13 17:05:29] NAME="CentOS Linux"
[2025-12-13 17:05:29] VERSION="7 (Core)"
[2025-12-13 17:05:29] ID="centos"
[2025-12-13 17:05:29] ID_LIKE="rhel fedora"
[2025-12-13 17:05:29] VERSION_ID="7"
[2025-12-13 17:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:05:29] ANSI_COLOR="0;31"
[2025-12-13 17:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:05:29] HOME_URL="https://www.centos.org/"
[2025-12-13 17:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:05:29] 
[2025-12-13 17:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:05:29] 
[2025-12-13 17:05:29] 2025-12-13 22:04:23,019 | INFO     | ***************************************
[2025-12-13 17:05:29] 2025-12-13 22:04:23,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:05:29] 2025-12-13 22:04:23,533 | INFO     | sufficient remaining disk space (28413263872 B)
[2025-12-13 17:05:29] 2025-12-13 22:04:23,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:05:29] 2025-12-13 22:04:23,534 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:05:29] 2025-12-13 22:04:23,534 | INFO     | update_server=False
[2025-12-13 17:05:29] 2025-12-13 22:04:23,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:05:29] 2025-12-13 22:04:23,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:05:29] 2025-12-13 22:04:23,806 | INFO     | all job control threads have been joined
[2025-12-13 17:05:29] 2025-12-13 22:04:23,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:05:29] 2025-12-13 22:04:23,843 | INFO     | aborting loop
[2025-12-13 17:05:29] 2025-12-13 22:04:23,884 | INFO     | all payload control threads have been joined
[2025-12-13 17:05:29] 2025-12-13 22:04:24,536 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,540 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,611 | INFO     | all data control threads have been joined
[2025-12-13 17:05:29] 2025-12-13 22:04:24,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,738 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:05:29] 2025-12-13 22:04:24,811 | INFO     | [job] control thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:05:29] 2025-12-13 22:04:24,848 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,889 | INFO     | [payload] control thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:24,999 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,038 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,108 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,108 | INFO     | [job] validate thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,566 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,617 | INFO     | [data] control thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:25,848 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:26,850 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:28,805 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:05:29] 2025-12-13 22:04:53,925 | INFO     | PID=29399 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 17:05:29] 2025-12-13 22:04:53,925 | INFO     | .. there are 3 such processes running
[2025-12-13 17:05:29] 2025-12-13 22:04:53,925 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:05:29] 2025-12-13 22:04:53,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:05:29] 2025-12-13 22:04:53,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:05:29] 2025-12-13 22:05:22,351 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:05:29] 2025-12-13 22:05:24,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360993130304)>', '<ExcThread(monitor, started 140360193926912)>']
[2025-12-13 17:05:29] 2025-12-13 22:05:25,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:05:29] 2025-12-13 22:05:25,065 | INFO     | [monitor] control thread has ended
[2025-12-13 17:05:29] 2025-12-13 22:05:29,367 | INFO     | all workflow threads have been joined
[2025-12-13 17:05:29] 2025-12-13 22:05:29,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:05:29] 2025-12-13 22:05:29,367 | INFO     | traces error code: 0
[2025-12-13 17:05:29] 2025-12-13 22:05:29,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:05:29] 2025-12-13 22:05:29,450 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:05:29] 2025-12-13 22:05:29,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:05:29] 2025-12-13 22:05:29,454 [wrapper] pilotpid: 29399
[2025-12-13 17:05:29] 2025-12-13 22:05:29,456 [wrapper] Pilot exit status: 0
[2025-12-13 17:05:29] 2025-12-13 22:05:29,464 [wrapper] pandaids: 6929244684
[2025-12-13 17:05:29] 2025-12-13 22:05:29,493 [wrapper] cleanup supervisor_pilot  4533 29400
[2025-12-13 17:05:29] 2025-12-13 22:05:29,495 [wrapper] Test setup, not cleaning
[2025-12-13 17:05:29] 2025-12-13 22:05:29,497 [wrapper] apfmon messages muted
[2025-12-13 17:05:29] 2025-12-13 22:05:29,499 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:05:29] 2025-12-13 22:05:29,501 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:05:29]  *** Error codes and diagnostics ***
[2025-12-13 17:05:29]     "exeErrorCode": 0,
[2025-12-13 17:05:29]     "exeErrorDiag": "",
[2025-12-13 17:05:29]     "pilotErrorCode": 0,
[2025-12-13 17:05:29]     "pilotErrorDiag": "",
[2025-12-13 17:05:29]  *** Listing of results directory ***
[2025-12-13 17:05:29] total 412084
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 04:03 queuedata.json
[2025-12-13 17:05:29] -rwx------ 1 boincer umatlas     36322 Dec 13 04:04 runpilot2-wrapper.sh
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas       100 Dec 13 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:05:29] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 12:55 run_atlas
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas       105 Dec 13 12:55 job.xml
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas 214736753 Dec 13 12:55 EVNT.47898779._000101.pool.root.1
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:55 start_atlas.sh
[2025-12-13 17:05:29] drwxrwx--x 2 boincer umatlas      4096 Dec 13 12:55 shared
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 12:55 input.tar.gz
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas         0 Dec 13 12:55 boinc_lockfile
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas      2521 Dec 13 12:55 pandaJob.out
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas        57 Dec 13 12:55 setup.sh.local
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas    991736 Dec 13 12:55 agis_schedconf.cvmfs.json
[2025-12-13 17:05:29] drwx------ 5 boincer umatlas      4096 Dec 13 12:55 pilot3
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas 198170909 Dec 13 17:03 HITS.47898782._002229.pool.root.1
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas        95 Dec 13 17:04 pilot_heartbeat.json
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas      5954 Dec 13 17:04 init_data.xml
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas       531 Dec 13 17:04 boinc_task_state.xml
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas      1054 Dec 13 17:04 memory_monitor_summary.json
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas   1516240 Dec 13 17:04 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas    489893 Dec 13 17:04 log.47898782._002229.job.log.tgz.1
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas      7854 Dec 13 17:04 heartbeat.json
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:05 boinc_mmap_file
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas        29 Dec 13 17:05 wrapper_checkpoint.txt
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas      4821 Dec 13 17:05 pilotlog.txt
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas   2084035 Dec 13 17:05 log.47898782._002229.job.log.1
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas       357 Dec 13 17:05 output.list
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:05 runtime_log
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas   2590720 Dec 13 17:05 result.tar.gz
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas       662 Dec 13 17:05 TqMMDm0iao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOUOKDmRJXcQn.diag
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 17:05 runtime_log.err
[2025-12-13 17:05:29] -rw-r--r-- 1 boincer umatlas     20939 Dec 13 17:05 stderr.txt
[2025-12-13 17:05:29] HITS file was successfully produced:
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas 198170909 Dec 13 17:03 shared/HITS.pool.root.1
[2025-12-13 17:05:29]  *** Contents of shared directory: ***
[2025-12-13 17:05:29] total 406368
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas 214736753 Dec 13 12:55 ATLAS.root_0
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:55 start_atlas.sh
[2025-12-13 17:05:29] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 12:55 input.tar.gz
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas 198170909 Dec 13 17:03 HITS.pool.root.1
[2025-12-13 17:05:29] -rw------- 1 boincer umatlas   2590720 Dec 13 17:05 result.tar.gz
17:05:30 (25715): run_atlas exited; CPU time 114073.190214
17:05:30 (25715): called boinc_finish(0)

</stderr_txt>
]]>

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