Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:12 (29857): wrapper (7.7.26015): starting
23:22:12 (29857): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 23:22:12] Arguments: --nthreads 8
[2025-12-13 23:22:12] Threads: 8
[2025-12-13 23:22:12] Checking for CVMFS
[2025-12-13 23:22:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 23:22:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 23:22:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 23:22:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 23:22:15] 2.11.2.0 16850 310394 139360 153975 0 63 23544576 25165824 4430 130560 11 146490541 99.876 85984131 2940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 23:22:15] CVMFS is ok
[2025-12-13 23:22:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 23:22:15] Checking for apptainer binary...
[2025-12-13 23:22:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 23:22:15] Running /usr/bin/apptainer --version
[2025-12-13 23:22:15] apptainer version 1.3.2-1.el7
[2025-12-13 23:22:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 23:22:17] cg-vwn401.simple-grid.lan
[2025-12-13 23:22:17] apptainer works
[2025-12-13 23:22:18] Set ATHENA_PROC_NUMBER=8
[2025-12-13 23:22:18] Set ATHENA_CORE_NUMBER=8
[2025-12-13 23:22:18] Starting ATLAS job with PandaID=6929308280
[2025-12-13 23:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:04:45]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:04:45] 2025-12-14 04:03:50,782 | INFO     | time since job start (20270s) is within the limit (174528.0s)
[2025-12-14 05:04:45] 2025-12-14 04:03:52,318 | INFO     | monitor loop #1433: job 0:6929308280 is in state 'finished'
[2025-12-14 05:04:45] 2025-12-14 04:03:52,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 05:04:45] 2025-12-14 04:03:52,789 | INFO     | time since job start (20272s) is within the limit (174528.0s)
[2025-12-14 05:04:45] 2025-12-14 04:03:54,797 | INFO     | time since job start (20274s) is within the limit (174528.0s)
[2025-12-14 05:04:45] 2025-12-14 04:03:54,822 | INFO     | monitor loop #1434: job 0:6929308280 is in state 'finished'
[2025-12-14 05:04:45] 2025-12-14 04:03:54,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,573 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 05:04:45] 2025-12-14 04:03:56,574 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 05:04:45] 2025-12-14 04:03:56,576 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6929308280/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,577 | INFO     | extracted standard info from prmon json
[2025-12-14 05:04:45] 2025-12-14 04:03:56,577 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:04:45] 2025-12-14 04:03:56,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:04:45] 2025-12-14 04:03:56,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:04:45] 2025-12-14 04:03:56,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:04:45] 2025-12-14 04:03:56,585 | INFO     | fitting pss+swap vs Time
[2025-12-14 05:04:45] 2025-12-14 04:03:56,586 | INFO     | sum of square deviations: 10546523325.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,593 | INFO     | sum of deviations: 55693375028.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,593 | INFO     | mean x: 1765675068.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,594 | INFO     | mean y: 2470579.296296296
[2025-12-14 05:04:45] 2025-12-14 04:03:56,594 | INFO     | intersect: -9321588234.89687
[2025-12-14 05:04:45] 2025-12-14 04:03:56,594 | INFO     | chi2: 4.91152841970748
[2025-12-14 05:04:45] 2025-12-14 04:03:56,595 | INFO     | sum of square deviations: 10065751520.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,599 | INFO     | sum of deviations: 76217276671.99998
[2025-12-14 05:04:45] 2025-12-14 04:03:56,599 | INFO     | mean x: 1765674916.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,599 | INFO     | mean y: 2477004.460815047
[2025-12-14 05:04:45] 2025-12-14 04:03:56,599 | INFO     | intersect: -13367109292.020933
[2025-12-14 05:04:45] 2025-12-14 04:03:56,600 | INFO     | chi2: 4.166558861130788
[2025-12-14 05:04:45] 2025-12-14 04:03:56,600 | INFO     | current chi2=4.166558861130788 (change=15.167774568655771 %)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,600 | INFO     | right removable region: 318
[2025-12-14 05:04:45] 2025-12-14 04:03:56,601 | INFO     | sum of square deviations: 10065751520.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,604 | INFO     | sum of deviations: -47933913948.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,605 | INFO     | mean x: 1765675221.0
[2025-12-14 05:04:45] 2025-12-14 04:03:56,605 | INFO     | mean y: 2503408.3761755484
[2025-12-14 05:04:45] 2025-12-14 04:03:56,605 | INFO     | intersect: 8410790055.9617195
[2025-12-14 05:04:45] 2025-12-14 04:03:56,605 | INFO     | chi2: 1.0412205820742333
[2025-12-14 05:04:45] 2025-12-14 04:03:56,606 | INFO     | current chi2=1.0412205820742333 (change=78.80047730363646 %)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,606 | INFO     | sum of square deviations: 9599817202.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,609 | INFO     | sum of deviations: -61271109406.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,610 | INFO     | mean x: 1765675373.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,610 | INFO     | mean y: 2507749.958598726
[2025-12-14 05:04:45] 2025-12-14 04:03:56,610 | INFO     | intersect: 11271981605.97198
[2025-12-14 05:04:45] 2025-12-14 04:03:56,610 | INFO     | chi2: 0.9394483366294213
[2025-12-14 05:04:45] 2025-12-14 04:03:56,610 | INFO     | current chi2=0.9394483366294213 (change=9.774321329882836 %)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,611 | INFO     | left removable region: 20
[2025-12-14 05:04:45] 2025-12-14 04:03:56,611 | INFO     | sum of square deviations: 8205826414.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,614 | INFO     | sum of deviations: -21260718173.49999
[2025-12-14 05:04:45] 2025-12-14 04:03:56,614 | INFO     | mean x: 1765675495.5
[2025-12-14 05:04:45] 2025-12-14 04:03:56,614 | INFO     | mean y: 2508503.298657718
[2025-12-14 05:04:45] 2025-12-14 04:03:56,615 | INFO     | intersect: 4577249327.6166935
[2025-12-14 05:04:45] 2025-12-14 04:03:56,615 | INFO     | chi2: 0.11276708173405223
[2025-12-14 05:04:45] 2025-12-14 04:03:56,615 | INFO     | current memory leak: -2.59 B/s (using 298 data points, chi2=0.11)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,616 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-14 05:04:45] 2025-12-14 04:03:56,616 | INFO     | ..............................
[2025-12-14 05:04:45] 2025-12-14 04:03:56,616 | INFO     | . Timing measurements:
[2025-12-14 05:04:45] 2025-12-14 04:03:56,616 | INFO     | . get job = 0 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . initial setup = 11 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . payload setup = 121 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . stage-in = 0 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . payload execution = 19872 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . stage-out = 3 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | . log creation = 0 s
[2025-12-14 05:04:45] 2025-12-14 04:03:56,617 | INFO     | ..............................
[2025-12-14 05:04:45] 2025-12-14 04:03:56,808 | INFO     | time since job start (20276s) is within the limit (174528.0s)
[2025-12-14 05:04:45] 2025-12-14 04:03:57,008 | INFO     | 
[2025-12-14 05:04:45] 2025-12-14 04:03:57,008 | INFO     | job summary report
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | --------------------------------------------------
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | PanDA job id: 6929308280
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | task id: 47898836
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | errors: (none)
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | pilot state: finished 
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | transexitcode: 0
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | exeerrorcode: 0
[2025-12-14 05:04:45] 2025-12-14 04:03:57,009 | INFO     | exeerrordiag: 
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | exitcode: 0
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | exitmsg: OK
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | cpuconsumptiontime: 75347 s
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | nevents: 400
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | neventsw: 0
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | pid: 7795
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | pgrp: 7795
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | corecount: 8
[2025-12-14 05:04:45] 2025-12-14 04:03:57,010 | INFO     | event service: False
[2025-12-14 05:04:45] 2025-12-14 04:03:57,011 | INFO     | sizes: {0: 2283778, 1: 2283862, 2: 2284061, 12: 2284061, 23: 2284089, 34: 2284117, 45: 2284273, 55: 2284301, 66: 2284329, 77: 2284357, 87: 2284983, 19998: 2317350,
[2025-12-14 05:04:45] 2025-12-14 04:03:57,011 | INFO     | --------------------------------------------------
[2025-12-14 05:04:45] 2025-12-14 04:03:57,011 | INFO     | 
[2025-12-14 05:04:45] 2025-12-14 04:03:57,011 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | job 6929308280 has completed (purged errors)
[2025-12-14 05:04:45] 2025-12-14 04:03:57,546 | INFO     | overall cleanup function is called
[2025-12-14 05:04:45] 2025-12-14 04:03:58,555 | INFO     | --- collectZombieJob: --- 10, [7795]
[2025-12-14 05:04:45] 2025-12-14 04:03:58,555 | INFO     | zombie collector waiting for pid 7795
[2025-12-14 05:04:45] 2025-12-14 04:03:58,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:04:45] 2025-12-14 04:03:58,556 | INFO     | collected zombie processes
[2025-12-14 05:04:45] 2025-12-14 04:03:58,556 | INFO     | will attempt to kill all subprocesses of pid=7795
[2025-12-14 05:04:45] 2025-12-14 04:03:58,671 | INFO     | process IDs to be killed: [7795] (in reverse order)
[2025-12-14 05:04:45] 2025-12-14 04:03:59,296 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:04:45] 2025-12-14 04:03:59,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:04:45] 2025-12-14 04:03:59,300 | INFO     | did not find any defunct processes belonging to 7795
[2025-12-14 05:04:45] 2025-12-14 04:03:59,303 | INFO     | did not find any defunct processes belonging to 7795
[2025-12-14 05:04:45] 2025-12-14 04:03:59,303 | INFO     | ready for new job
[2025-12-14 05:04:45] 2025-12-14 04:03:59,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:04:45] 2025-12-14 04:03:59,308 | INFO     | ***************************************
[2025-12-14 05:04:45] 2025-12-14 04:03:59,309 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:04:45] 2025-12-14 04:03:59,309 | INFO     | ***************************************
[2025-12-14 05:04:45] 2025-12-14 04:03:59,309 | INFO     | 
[2025-12-14 05:04:45] 2025-12-14 04:03:59,309 | INFO     | pilot is running in a VM
[2025-12-14 05:04:45] 2025-12-14 04:03:59,310 | INFO     | architecture information:
[2025-12-14 05:04:45] 2025-12-14 04:03:59,324 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:04:45] 2025-12-14 04:03:59,514 | INFO     | cat /etc/os-release:
[2025-12-14 05:04:45] NAME="CentOS Linux"
[2025-12-14 05:04:45] VERSION="7 (Core)"
[2025-12-14 05:04:45] ID="centos"
[2025-12-14 05:04:45] ID_LIKE="rhel fedora"
[2025-12-14 05:04:45] VERSION_ID="7"
[2025-12-14 05:04:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:04:45] ANSI_COLOR="0;31"
[2025-12-14 05:04:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:04:45] HOME_URL="https://www.centos.org/"
[2025-12-14 05:04:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:04:45] 
[2025-12-14 05:04:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:04:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:04:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:04:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:04:45] 
[2025-12-14 05:04:45] 2025-12-14 04:03:59,515 | INFO     | ***************************************
[2025-12-14 05:04:45] 2025-12-14 04:04:00,018 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-14 05:04:45] 2025-12-14 04:04:00,250 | INFO     | sufficient remaining disk space (497323868160 B)
[2025-12-14 05:04:45] 2025-12-14 04:04:00,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:04:45] 2025-12-14 04:04:00,251 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:04:45] 2025-12-14 04:04:00,251 | INFO     | update_server=False
[2025-12-14 05:04:45] 2025-12-14 04:04:00,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:04:45] 2025-12-14 04:04:00,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:04:45] 2025-12-14 04:04:00,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:04:45] 2025-12-14 04:04:00,585 | INFO     | all job control threads have been joined
[2025-12-14 05:04:45] 2025-12-14 04:04:00,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:04:45] 2025-12-14 04:04:00,847 | INFO     | aborting loop
[2025-12-14 05:04:45] 2025-12-14 04:04:01,200 | INFO     | all data control threads have been joined
[2025-12-14 05:04:45] 2025-12-14 04:04:01,257 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,389 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,505 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,553 | INFO     | [job] validate thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,591 | INFO     | [job] control thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,739 | INFO     | all payload control threads have been joined
[2025-12-14 05:04:45] 2025-12-14 04:04:01,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:04:45] 2025-12-14 04:04:01,853 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,885 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:01,928 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,206 | INFO     | [data] control thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,259 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,326 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,589 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,745 | INFO     | [payload] control thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:02,767 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:04,260 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:04:45] 2025-12-14 04:04:30,007 | INFO     | PID=1237 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 05:04:45] 2025-12-14 04:04:30,007 | INFO     | .. there are 9 such processes running
[2025-12-14 05:04:45] 2025-12-14 04:04:30,007 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:04:45] 2025-12-14 04:04:30,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:04:45] 2025-12-14 04:04:30,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:04:45] 2025-12-14 04:04:34,652 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:04:45] 2025-12-14 04:04:35,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953635751744)>', '<ExcThread(monitor, started 139952968947456)>']
[2025-12-14 05:04:45] 2025-12-14 04:04:36,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:04:45] 2025-12-14 04:04:36,043 | INFO     | [monitor] control thread has ended
[2025-12-14 05:04:45] 2025-12-14 04:04:40,133 | INFO     | all workflow threads have been joined
[2025-12-14 05:04:45] 2025-12-14 04:04:40,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:04:45] 2025-12-14 04:04:40,134 | INFO     | traces error code: 0
[2025-12-14 05:04:45] 2025-12-14 04:04:40,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:04:45] 2025-12-14 04:04:40,502 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:04:45] 2025-12-14 04:04:40,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:04:45] 2025-12-14 04:04:40,703 [wrapper] pilotpid: 1237
[2025-12-14 05:04:45] 2025-12-14 04:04:40,775 [wrapper] Pilot exit status: 0
[2025-12-14 05:04:45] 2025-12-14 04:04:41,159 [wrapper] pandaids: 6929308280
[2025-12-14 05:04:45] 2025-12-14 04:04:42,024 [wrapper] cleanup supervisor_pilot 10284 1238
[2025-12-14 05:04:45] 2025-12-14 04:04:42,057 [wrapper] Test setup, not cleaning
[2025-12-14 05:04:45] 2025-12-14 04:04:42,114 [wrapper] apfmon messages muted
[2025-12-14 05:04:45] 2025-12-14 04:04:42,174 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:04:45] 2025-12-14 04:04:42,226 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:04:45]  *** Error codes and diagnostics ***
[2025-12-14 05:04:45]     "exeErrorCode": 0,
[2025-12-14 05:04:45]     "exeErrorDiag": "",
[2025-12-14 05:04:45]     "pilotErrorCode": 0,
[2025-12-14 05:04:45]     "pilotErrorDiag": "",
[2025-12-14 05:04:45]  *** Listing of results directory ***
[2025-12-14 05:04:45] total 410944
[2025-12-14 05:04:45] -rwx------. 1 boinc boinc     36322 Dec 13 12:40 runpilot2-wrapper.sh
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc    579449 Dec 13 12:45 pilot3.tar.gz
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc      5112 Dec 13 12:45 queuedata.json
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc       100 Dec 13 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:04:45] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 23:22 run_atlas
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc       105 Dec 13 23:22 job.xml
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc      6393 Dec 13 23:22 init_data.xml
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc 213245062 Dec 13 23:22 EVNT.47898833._000080.pool.root.1
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc     15847 Dec 13 23:22 start_atlas.sh
[2025-12-14 05:04:45] drwxrwx--x. 2 boinc boinc        68 Dec 13 23:22 shared
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc    592399 Dec 13 23:22 input.tar.gz
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc         0 Dec 13 23:22 boinc_lockfile
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc      2548 Dec 13 23:22 pandaJob.out
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc    991728 Dec 13 23:25 agis_schedconf.cvmfs.json
[2025-12-14 05:04:45] drwx------. 5 boinc boinc      4096 Dec 13 23:26 pilot3
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc 197228122 Dec 14 05:01 HITS.47898836._001478.pool.root.1
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc       531 Dec 14 05:01 boinc_task_state.xml
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc      1018 Dec 14 05:02 memory_monitor_summary.json
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc   1516240 Dec 14 05:02 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc    522718 Dec 14 05:02 log.47898836._001478.job.log.tgz.1
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc      7774 Dec 14 05:03 heartbeat.json
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc        95 Dec 14 05:03 pilot_heartbeat.json
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc      8192 Dec 14 05:04 boinc_mmap_file
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc        28 Dec 14 05:04 wrapper_checkpoint.txt
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc      4884 Dec 14 05:04 pilotlog.txt
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc   2692819 Dec 14 05:04 log.47898836._001478.job.log.1
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc       357 Dec 14 05:04 output.list
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc       620 Dec 14 05:04 runtime_log
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc   3235840 Dec 14 05:04 result.tar.gz
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc      8833 Dec 14 05:04 runtime_log.err
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc       657 Dec 14 05:04 F5nKDmx9co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcWTKDmzajugm.diag
[2025-12-14 05:04:45] -rw-r--r--. 1 boinc boinc     20994 Dec 14 05:04 stderr.txt
[2025-12-14 05:04:45] HITS file was successfully produced:
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc 197228122 Dec 14 05:01 shared/HITS.pool.root.1
[2025-12-14 05:04:45]  *** Contents of shared directory: ***
[2025-12-14 05:04:45] total 404612
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc 213245062 Dec 13 23:22 ATLAS.root_0
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc     15847 Dec 13 23:22 start_atlas.sh
[2025-12-14 05:04:45] -rw-r--r--. 2 boinc boinc    592399 Dec 13 23:22 input.tar.gz
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc 197228122 Dec 14 05:01 HITS.pool.root.1
[2025-12-14 05:04:45] -rw-------. 1 boinc boinc   3235840 Dec 14 05:04 result.tar.gz
05:04:47 (29857): run_atlas exited; CPU time 75634.575424
05:04:47 (29857): called boinc_finish(0)

</stderr_txt>
]]>

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