Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:10:45 (3792185): wrapper (7.7.26015): starting
10:10:45 (3792185): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 10:10:45] Arguments: --nthreads 12
[2025-12-13 10:10:45] Threads: 12
[2025-12-13 10:10:45] Checking for CVMFS
[2025-12-13 10:10:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 10:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 10:10:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 10:10:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 10:10:47] 2.11.5.0 2587603 18013 286492 153968 3 208 37407539 45568001 12308 130560 0 105023874 99.710 82553664 18504 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 10:10:47] CVMFS is ok
[2025-12-13 10:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 10:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 10:10:47] Further information can be found at the LHC@home message board.
[2025-12-13 10:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 10:10:47] Checking for apptainer binary...
[2025-12-13 10:10:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 10:10:48] Running /usr/bin/apptainer --version
[2025-12-13 10:10:48] apptainer version 1.4.1-1.el9
[2025-12-13 10:10:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 10:10:49] wns0056.triumf.lcg
[2025-12-13 10:10:49] apptainer works
[2025-12-13 10:10:49] Set ATHENA_PROC_NUMBER=12
[2025-12-13 10:10:49] Set ATHENA_CORE_NUMBER=12
[2025-12-13 10:10:49] Starting ATLAS job with PandaID=6929302254
[2025-12-13 10:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 10:16:31]  *** The last 200 lines of the pilot log: ***
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | WARNING  | wrong length of table data, x=[1765649574.0], y=[11481.0] (must be same and length>=4)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | could have reported an average CPU frequency of 2537 MHz (4 samples)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . Timing measurements:
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . get job = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . initial setup = 5 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload setup = 20 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-in = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload execution = 59 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-out = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . log creation = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 10:16:31] 2025-12-13 18:15:51,644 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302254/pilotlog.txt
[2025-12-13 10:16:31] 2025-12-13 18:15:51,695 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 10:16:31] - Log from pilotlog.txt -
[2025-12-13 10:16:31] 2025-12-13 18:15:51,626 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929302254/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | INFO     | extracted standard info from prmon json
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | WARNING  | wrong length of table data, x=[1765649574.0], y=[11481.0] (must be same and length>=4)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | could have reported an average CPU frequency of 2537 MHz (4 samples)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . Timing measurements:
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . get job = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . initial setup = 5 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload setup = 20 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-in = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload execution = 59 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-out = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . log creation = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 10:16:31] 2025-12-13 18:15:51,644 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302254/pilotlog.txt
[2025-12-13 10:16:31] 2025-12-13 18:15:51,695 | WARNING  | 
[2025-12-13 10:16:31] [begin log extracts]
[2025-12-13 10:16:31] - Log from pilotlog.txt -
[2025-12-13 10:16:31] 2025-12-13 18:15:51,626 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929302254/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | INFO     | extracted standard info from prmon json
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 10:16:31] 2025-12-13 18:15:51,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | WARNING  | wrong length of table data, x=[1765649574.0], y=[11481.0] (must be same and length>=4)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | could have reported an average CPU frequency of 2537 MHz (4 samples)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . Timing measurements:
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . get job = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . initial setup = 5 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload setup = 20 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-in = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . payload execution = 59 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . stage-out = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | . log creation = 0 s
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | ..............................
[2025-12-13 10:16:31] 2025-12-13 18:15:51,643 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 10:16:31] 2025-12-13 18:15:51,644 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302254/pilotlog.txt
[2025-12-13 10:16:31] [end log extracts]
[2025-12-13 10:16:31] 2025-12-13 18:15:51,695 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 10:16:31] 2025-12-13 18:15:51,704 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 10:16:31] 2025-12-13 18:15:52,234 | INFO     | 
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | job summary report
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | --------------------------------------------------
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | PanDA job id: 6929302254
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | task id: 47898763
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 10:13:23,211 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | pilot state: failed 
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | transexitcode: 65
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | exeerrorcode: 65
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | exitcode: 65
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | nevents: 0
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | neventsw: 0
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | pid: 3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | pgrp: 3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | corecount: 12
[2025-12-13 10:16:31] 2025-12-13 18:15:52,235 | INFO     | event service: False
[2025-12-13 10:16:31] 2025-12-13 18:15:52,236 | INFO     | sizes: {0: 2283723, 1: 2283978, 2: 2284006, 13: 2284006, 19: 2284324, 24: 2284352, 84: 2307649, 85: 2311941, 88: 2311969, 222: 2312135}
[2025-12-13 10:16:31] 2025-12-13 18:15:52,236 | INFO     | --------------------------------------------------
[2025-12-13 10:16:31] 2025-12-13 18:15:52,236 | INFO     | 
[2025-12-13 10:16:31] 2025-12-13 18:15:52,236 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | job 6929302254 has completed (purged errors)
[2025-12-13 10:16:31] 2025-12-13 18:15:52,305 | INFO     | overall cleanup function is called
[2025-12-13 10:16:31] 2025-12-13 18:15:53,311 | INFO     | --- collectZombieJob: --- 10, [3802790]
[2025-12-13 10:16:31] 2025-12-13 18:15:53,312 | INFO     | zombie collector waiting for pid 3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:53,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 10:16:31] 2025-12-13 18:15:53,312 | INFO     | collected zombie processes
[2025-12-13 10:16:31] 2025-12-13 18:15:53,312 | INFO     | will attempt to kill all subprocesses of pid=3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:53,810 | INFO     | process IDs to be killed: [3802790] (in reverse order)
[2025-12-13 10:16:31] 2025-12-13 18:15:54,249 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 10:16:31] 2025-12-13 18:15:54,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 10:16:31] 2025-12-13 18:15:54,277 | INFO     | did not find any defunct processes belonging to 3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:54,327 | INFO     | did not find any defunct processes belonging to 3802790
[2025-12-13 10:16:31] 2025-12-13 18:15:54,327 | INFO     | ready for new job
[2025-12-13 10:16:31] 2025-12-13 18:15:54,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 10:16:31] 2025-12-13 18:15:54,328 | INFO     | ***************************************
[2025-12-13 10:16:31] 2025-12-13 18:15:54,328 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 10:16:31] 2025-12-13 18:15:54,329 | INFO     | ***************************************
[2025-12-13 10:16:31] 2025-12-13 18:15:54,329 | INFO     | 
[2025-12-13 10:16:31] 2025-12-13 18:15:54,353 | INFO     | architecture information:
[2025-12-13 10:16:31] 2025-12-13 18:15:54,357 | INFO     | executing command: cat /etc/os-release
[2025-12-13 10:16:31] 2025-12-13 18:15:54,447 | INFO     | cat /etc/os-release:
[2025-12-13 10:16:31] NAME="CentOS Linux"
[2025-12-13 10:16:31] VERSION="7 (Core)"
[2025-12-13 10:16:31] ID="centos"
[2025-12-13 10:16:31] ID_LIKE="rhel fedora"
[2025-12-13 10:16:31] VERSION_ID="7"
[2025-12-13 10:16:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 10:16:31] ANSI_COLOR="0;31"
[2025-12-13 10:16:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 10:16:31] HOME_URL="https://www.centos.org/"
[2025-12-13 10:16:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 10:16:31] 
[2025-12-13 10:16:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 10:16:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 10:16:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 10:16:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 10:16:31] 
[2025-12-13 10:16:31] 2025-12-13 18:15:54,447 | INFO     | ***************************************
[2025-12-13 10:16:31] 2025-12-13 18:15:54,952 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 10:16:31] 2025-12-13 18:15:54,978 | INFO     | sufficient remaining disk space (2116458381312 B)
[2025-12-13 10:16:31] 2025-12-13 18:15:54,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 10:16:31] 2025-12-13 18:15:54,978 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 10:16:31] 2025-12-13 18:15:54,978 | INFO     | update_server=False
[2025-12-13 10:16:31] 2025-12-13 18:15:54,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 10:16:31] 2025-12-13 18:15:55,093 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 10:16:31] 2025-12-13 18:15:55,094 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 10:16:31] 2025-12-13 18:15:55,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:16:31] 2025-12-13 18:15:55,094 | INFO     | will abort loop
[2025-12-13 10:16:31] 2025-12-13 18:15:55,180 | INFO     | all job control threads have been joined
[2025-12-13 10:16:31] 2025-12-13 18:15:55,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 10:16:31] 2025-12-13 18:15:55,623 | INFO     | all payload control threads have been joined
[2025-12-13 10:16:31] 2025-12-13 18:15:55,644 | INFO     | all data control threads have been joined
[2025-12-13 10:16:31] 2025-12-13 18:15:55,985 | INFO     | [job] retrieve thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,102 | INFO     | [job] job monitor thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,186 | INFO     | [job] control thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 10:16:31] 2025-12-13 18:15:56,246 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,359 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,519 | INFO     | [payload] validate_post thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,527 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,629 | INFO     | [payload] control thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,650 | INFO     | [data] control thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,692 | INFO     | [job] validate thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:56,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:16:31] 2025-12-13 18:15:57,180 | INFO     | [data] copytool_in thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:57,204 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:57,316 | INFO     | [payload] failed_post thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:57,925 | INFO     | [job] queue monitor thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:58,237 | INFO     | [data] copytool_out thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:15:59,423 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 10:16:31] 2025-12-13 18:16:24,706 | INFO     | PID=3795921 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 10:16:31] 2025-12-13 18:16:24,706 | INFO     | .. there are 42 such processes running
[2025-12-13 10:16:31] 2025-12-13 18:16:24,707 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 10:16:31] 2025-12-13 18:16:24,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 10:16:31] 2025-12-13 18:16:24,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 10:16:31] 2025-12-13 18:16:24,759 | INFO     | [monitor] cgroup control has ended
[2025-12-13 10:16:31] 2025-12-13 18:16:25,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258540332864)>', '<ExcThread(monitor, started 140257836123904)>']
[2025-12-13 10:16:31] 2025-12-13 18:16:26,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 10:16:31] 2025-12-13 18:16:26,720 | INFO     | [monitor] control thread has ended
[2025-12-13 10:16:31] 2025-12-13 18:16:30,792 | INFO     | all workflow threads have been joined
[2025-12-13 10:16:31] 2025-12-13 18:16:30,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 10:16:31] 2025-12-13 18:16:30,793 | INFO     | traces error code: 0
[2025-12-13 10:16:31] 2025-12-13 18:16:30,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 10:16:31] 2025-12-13 18:16:31,074 [wrapper] ==== pilot stdout END ====
[2025-12-13 10:16:31] 2025-12-13 18:16:31,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 10:16:31] 2025-12-13 18:16:31,077 [wrapper] pilotpid: 3795921
[2025-12-13 10:16:31] 2025-12-13 18:16:31,078 [wrapper] Pilot exit status: 0
[2025-12-13 10:16:31] 2025-12-13 18:16:31,107 [wrapper] pandaids: 6929302254
[2025-12-13 10:16:31] 2025-12-13 18:16:31,156 [wrapper] cleanup supervisor_pilot 3795927 3795922
[2025-12-13 10:16:31] 2025-12-13 18:16:31,158 [wrapper] Test setup, not cleaning
[2025-12-13 10:16:31] 2025-12-13 18:16:31,159 [wrapper] apfmon messages muted
[2025-12-13 10:16:31] 2025-12-13 18:16:31,161 [wrapper] ==== wrapper stdout END ====
[2025-12-13 10:16:31] 2025-12-13 18:16:31,163 [wrapper] ==== wrapper stderr END ====
[2025-12-13 10:16:31]  *** Error codes and diagnostics ***
[2025-12-13 10:16:31]     "exeErrorCode": 65,
[2025-12-13 10:16:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 10:16:31]     "pilotErrorCode": 1305,
[2025-12-13 10:16:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 10:16:31]  *** Listing of results directory ***
[2025-12-13 10:16:31] total 222940
[2025-12-13 10:16:31] -rwx------. 1 boinc boinc     36322 Dec 13 03:39 runpilot2-wrapper.sh
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:43 pilot3.tar.gz
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:44 queuedata.json
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc       100 Dec 13 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 10:16:31] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 10:10 run_atlas
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc       105 Dec 13 10:10 job.xml
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc      6595 Dec 13 10:10 init_data.xml
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc 224144388 Dec 13 10:10 EVNT.47898761._000247.pool.root.1
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc     15847 Dec 13 10:10 start_atlas.sh
[2025-12-13 10:16:31] drwxrwx--x. 2 boinc boinc      4096 Dec 13 10:10 shared
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc    592394 Dec 13 10:10 input.tar.gz
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc         0 Dec 13 10:10 boinc_lockfile
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc      2505 Dec 13 10:10 pandaJob.out
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc    991736 Dec 13 10:11 agis_schedconf.cvmfs.json
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc   1516240 Dec 13 10:11 agis_ddmendpoints.agis.ALL.json
[2025-12-13 10:16:31] drwx------. 5 boinc boinc      4096 Dec 13 10:11 pilot3
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc       991 Dec 13 10:13 memory_monitor_summary.json
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc     22068 Dec 13 10:13 log.47898763._004294.job.log.tgz.1
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc      8390 Dec 13 10:15 heartbeat.json
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc      8192 Dec 13 10:16 boinc_mmap_file
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc        22 Dec 13 10:16 wrapper_checkpoint.txt
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc        95 Dec 13 10:16 pilot_heartbeat.json
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc       523 Dec 13 10:16 boinc_task_state.xml
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc      5009 Dec 13 10:16 pilotlog.txt
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc     92996 Dec 13 10:16 log.47898763._004294.job.log.1
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc       188 Dec 13 10:16 output.list
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc       620 Dec 13 10:16 runtime_log
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc    133120 Dec 13 10:16 result.tar.gz
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc      8636 Dec 13 10:16 runtime_log.err
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc       643 Dec 13 10:16 qCJLDmZ9co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVLPKDmbStHim.diag
[2025-12-13 10:16:31] -rw-r--r--. 1 boinc boinc     21850 Dec 13 10:16 stderr.txt
[2025-12-13 10:16:31] No HITS result produced
[2025-12-13 10:16:31]  *** Contents of shared directory: ***
[2025-12-13 10:16:31] total 219624
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc 224144388 Dec 13 10:10 ATLAS.root_0
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc     15847 Dec 13 10:10 start_atlas.sh
[2025-12-13 10:16:31] -rw-r--r--. 2 boinc boinc    592394 Dec 13 10:10 input.tar.gz
[2025-12-13 10:16:31] -rw-------. 1 boinc boinc    133120 Dec 13 10:16 result.tar.gz
10:16:32 (3792185): run_atlas exited; CPU time 27.301341
10:16:32 (3792185): called boinc_finish(0)

</stderr_txt>
]]>

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