Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:41:02 (32471): wrapper (7.7.26015): starting
12:41:02 (32471): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 12:41:02] Arguments: --nthreads 8
[2025-12-13 12:41:02] Threads: 8
[2025-12-13 12:41:02] Checking for CVMFS
[2025-12-13 12:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 12:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 12:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 12:41:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 12:41:03] 2.11.2.0 8814 142454 134600 153968 2 59 16255543 18432000 1833 130560 0 101707208 99.976 5821303 32439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 12:41:03] CVMFS is ok
[2025-12-13 12:41:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 12:41:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 12:41:03] Further information can be found at the LHC@home message board.
[2025-12-13 12:41:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 12:41:03] Checking for apptainer binary...
[2025-12-13 12:41:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 12:41:03] Running /usr/bin/apptainer --version
[2025-12-13 12:41:03] apptainer version 1.3.2-1.el7
[2025-12-13 12:41:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 12:41:04] c-206-19.aglt2.org
[2025-12-13 12:41:04] apptainer works
[2025-12-13 12:41:04] Set ATHENA_PROC_NUMBER=8
[2025-12-13 12:41:04] Set ATHENA_CORE_NUMBER=8
[2025-12-13 12:41:04] Starting ATLAS job with PandaID=6929300627
[2025-12-13 12:41:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:00:54]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:00:54] 2025-12-13 22:00:21,523 | INFO     | PID=3849 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 17:00:54] 2025-12-13 22:00:21,523 | INFO     | .. there are 3 such processes running
[2025-12-13 17:00:54] 2025-12-13 22:00:22,105 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 17:00:54] 2025-12-13 22:00:22,109 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2428.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,112 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929300627/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,112 | INFO     | extracted standard info from prmon json
[2025-12-13 17:00:54] 2025-12-13 22:00:22,112 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 17:00:54] 2025-12-13 22:00:22,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:00:54] 2025-12-13 22:00:22,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:00:54] 2025-12-13 22:00:22,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:00:54] 2025-12-13 22:00:22,116 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:00:54] 2025-12-13 22:00:22,117 | INFO     | sum of square deviations: 5141528960.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,118 | INFO     | sum of deviations: -11465673033.000004
[2025-12-13 17:00:54] 2025-12-13 22:00:22,118 | INFO     | mean x: 1765655447.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,119 | INFO     | mean y: 2489989.560784314
[2025-12-13 17:00:54] 2025-12-13 22:00:22,119 | INFO     | intersect: 3939923426.5276484
[2025-12-13 17:00:54] 2025-12-13 22:00:22,119 | INFO     | chi2: 2.3186502127762143
[2025-12-13 17:00:54] 2025-12-13 22:00:22,119 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 17:00:54] 2025-12-13 22:00:22,121 | INFO     | sum of deviations: 5470405549.500026
[2025-12-13 17:00:54] 2025-12-13 22:00:22,121 | INFO     | mean x: 1765655294.5
[2025-12-13 17:00:54] 2025-12-13 22:00:22,121 | INFO     | mean y: 2498561.028
[2025-12-13 17:00:54] 2025-12-13 22:00:22,121 | INFO     | intersect: -1991082704.8668098
[2025-12-13 17:00:54] 2025-12-13 22:00:22,121 | INFO     | chi2: 1.5484778993642694
[2025-12-13 17:00:54] 2025-12-13 22:00:22,122 | INFO     | current chi2=1.5484778993642694 (change=33.21640794148878 %)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,122 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,123 | INFO     | sum of deviations: 5270544691.999999
[2025-12-13 17:00:54] 2025-12-13 22:00:22,123 | INFO     | mean x: 1765655142.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,123 | INFO     | mean y: 2498454.057142857
[2025-12-13 17:00:54] 2025-12-13 22:00:22,124 | INFO     | intersect: -2038261587.2297454
[2025-12-13 17:00:54] 2025-12-13 22:00:22,124 | INFO     | chi2: 1.5486273052418764
[2025-12-13 17:00:54] 2025-12-13 22:00:22,124 | INFO     | current chi2=1.5486273052418764 (change=-0.009648563771454073 %)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,124 | INFO     | right removable region: 244
[2025-12-13 17:00:54] 2025-12-13 22:00:22,124 | INFO     | sum of square deviations: 4844974562.5
[2025-12-13 17:00:54] 2025-12-13 22:00:22,126 | INFO     | sum of deviations: -47719515723.00003
[2025-12-13 17:00:54] 2025-12-13 22:00:22,126 | INFO     | mean x: 1765655599.5
[2025-12-13 17:00:54] 2025-12-13 22:00:22,126 | INFO     | mean y: 2508456.824
[2025-12-13 17:00:54] 2025-12-13 22:00:22,126 | INFO     | intersect: 17392946539.59222
[2025-12-13 17:00:54] 2025-12-13 22:00:22,127 | INFO     | chi2: 0.9754661809390452
[2025-12-13 17:00:54] 2025-12-13 22:00:22,127 | INFO     | current chi2=0.9754661809390452 (change=57.92956714367538 %)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,127 | INFO     | sum of square deviations: 4560048290.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,128 | INFO     | sum of deviations: -47310557693.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,128 | INFO     | mean x: 1765655752.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,129 | INFO     | mean y: 2508209.706122449
[2025-12-13 17:00:54] 2025-12-13 22:00:22,129 | INFO     | intersect: 18321208584.91055
[2025-12-13 17:00:54] 2025-12-13 22:00:22,129 | INFO     | chi2: 0.9591334472746913
[2025-12-13 17:00:54] 2025-12-13 22:00:22,129 | INFO     | current chi2=0.9591334472746913 (change=1.6743516057759205 %)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,129 | INFO     | left removable region: 20
[2025-12-13 17:00:54] 2025-12-13 22:00:22,130 | INFO     | sum of square deviations: 3485088600.0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,131 | INFO     | sum of deviations: -14672611454.000004
[2025-12-13 17:00:54] 2025-12-13 22:00:22,131 | INFO     | mean x: 1765655721.5
[2025-12-13 17:00:54] 2025-12-13 22:00:22,131 | INFO     | mean y: 2508433.223214286
[2025-12-13 17:00:54] 2025-12-13 22:00:22,131 | INFO     | intersect: 7436115820.737419
[2025-12-13 17:00:54] 2025-12-13 22:00:22,131 | INFO     | chi2: 0.12478661567373779
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | current memory leak: -4.21 B/s (using 224 data points, chi2=0.12)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | could have reported an average CPU frequency of 2573 MHz (12 samples)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | ..............................
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | . Timing measurements:
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | . get job = 0 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | . initial setup = 2 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,132 | INFO     | . payload setup = 4 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,133 | INFO     | . stage-in = 0 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,133 | INFO     | . payload execution = 15513 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,133 | INFO     | . stage-out = 2 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,133 | INFO     | . log creation = 0 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,133 | INFO     | ..............................
[2025-12-13 17:00:54] 2025-12-13 22:00:22,286 | INFO     | 
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | job summary report
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | --------------------------------------------------
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | PanDA job id: 6929300627
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | task id: 47898763
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | errors: (none)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | pilot state: finished 
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | transexitcode: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | exeerrorcode: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | exeerrordiag: 
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | exitcode: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,288 | INFO     | exitmsg: OK
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | cpuconsumptiontime: 118998 s
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | nevents: 400
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | neventsw: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | pid: 10308
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | pgrp: 10308
[2025-12-13 17:00:54] 2025-12-13 22:00:22,289 | INFO     | corecount: 8
[2025-12-13 17:00:54] 2025-12-13 22:00:22,290 | INFO     | event service: False
[2025-12-13 17:00:54] 2025-12-13 22:00:22,290 | INFO     | sizes: {0: 2283781, 1: 2283980, 2: 2283980, 5: 2284270, 12: 2284326, 15522: 2315520, 15525: 2324574, 15531: 2324712}
[2025-12-13 17:00:54] 2025-12-13 22:00:22,290 | INFO     | --------------------------------------------------
[2025-12-13 17:00:54] 2025-12-13 22:00:22,290 | INFO     | 
[2025-12-13 17:00:54] 2025-12-13 22:00:22,290 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 17:00:54] 2025-12-13 22:00:22,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,310 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,310 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,310 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | job 6929300627 has completed (purged errors)
[2025-12-13 17:00:54] 2025-12-13 22:00:22,312 | INFO     | overall cleanup function is called
[2025-12-13 17:00:54] 2025-12-13 22:00:23,319 | INFO     | --- collectZombieJob: --- 10, [10308]
[2025-12-13 17:00:54] 2025-12-13 22:00:23,319 | INFO     | zombie collector waiting for pid 10308
[2025-12-13 17:00:54] 2025-12-13 22:00:23,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:00:54] 2025-12-13 22:00:23,319 | INFO     | collected zombie processes
[2025-12-13 17:00:54] 2025-12-13 22:00:23,319 | INFO     | will attempt to kill all subprocesses of pid=10308
[2025-12-13 17:00:54] 2025-12-13 22:00:23,460 | INFO     | process IDs to be killed: [10308] (in reverse order)
[2025-12-13 17:00:54] 2025-12-13 22:00:23,509 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:00:54] 2025-12-13 22:00:23,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:00:54] 2025-12-13 22:00:23,513 | INFO     | did not find any defunct processes belonging to 10308
[2025-12-13 17:00:54] 2025-12-13 22:00:23,515 | INFO     | did not find any defunct processes belonging to 10308
[2025-12-13 17:00:54] 2025-12-13 22:00:23,516 | INFO     | ready for new job
[2025-12-13 17:00:54] 2025-12-13 22:00:23,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:00:54] 2025-12-13 22:00:23,517 | INFO     | ***************************************
[2025-12-13 17:00:54] 2025-12-13 22:00:23,517 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:00:54] 2025-12-13 22:00:23,518 | INFO     | ***************************************
[2025-12-13 17:00:54] 2025-12-13 22:00:23,518 | INFO     | 
[2025-12-13 17:00:54] 2025-12-13 22:00:23,519 | INFO     | architecture information:
[2025-12-13 17:00:54] 2025-12-13 22:00:23,519 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:00:54] 2025-12-13 22:00:23,532 | INFO     | cat /etc/os-release:
[2025-12-13 17:00:54] NAME="CentOS Linux"
[2025-12-13 17:00:54] VERSION="7 (Core)"
[2025-12-13 17:00:54] ID="centos"
[2025-12-13 17:00:54] ID_LIKE="rhel fedora"
[2025-12-13 17:00:54] VERSION_ID="7"
[2025-12-13 17:00:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:00:54] ANSI_COLOR="0;31"
[2025-12-13 17:00:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:00:54] HOME_URL="https://www.centos.org/"
[2025-12-13 17:00:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:00:54] 
[2025-12-13 17:00:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:00:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:00:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:00:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:00:54] 
[2025-12-13 17:00:54] 2025-12-13 22:00:23,532 | INFO     | ***************************************
[2025-12-13 17:00:54] 2025-12-13 22:00:24,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 17:00:54] 2025-12-13 22:00:24,052 | INFO     | sufficient remaining disk space (28201451520 B)
[2025-12-13 17:00:54] 2025-12-13 22:00:24,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:00:54] 2025-12-13 22:00:24,053 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:00:54] 2025-12-13 22:00:24,053 | INFO     | update_server=False
[2025-12-13 17:00:54] 2025-12-13 22:00:24,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:00:54] 2025-12-13 22:00:24,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:00:54] 2025-12-13 22:00:24,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:00:54] 2025-12-13 22:00:24,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:00:54] 2025-12-13 22:00:24,054 | INFO     | aborting loop
[2025-12-13 17:00:54] 2025-12-13 22:00:24,213 | INFO     | all data control threads have been joined
[2025-12-13 17:00:54] 2025-12-13 22:00:24,806 | INFO     | all payload control threads have been joined
[2025-12-13 17:00:54] 2025-12-13 22:00:25,059 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,059 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,060 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,113 | INFO     | all job control threads have been joined
[2025-12-13 17:00:54] 2025-12-13 22:00:25,218 | INFO     | [data] control thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,257 | INFO     | [job] validate thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,278 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,321 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,649 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,649 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,660 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,662 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:25,811 | INFO     | [payload] control thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:26,059 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:26,118 | INFO     | [job] control thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:26,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:00:54] 2025-12-13 22:00:30,387 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:00:54] 2025-12-13 22:00:39,997 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:00:54] 2025-12-13 22:00:40,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245313980224)>', '<ExcThread(monitor, started 140244875720448)>']
[2025-12-13 17:00:54] 2025-12-13 22:00:45,409 | INFO     | all workflow threads have been joined
[2025-12-13 17:00:54] 2025-12-13 22:00:45,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:00:54] 2025-12-13 22:00:45,409 | INFO     | traces error code: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:45,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:00:54] 2025-12-13 22:00:53,791 | INFO     | PID=3849 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 17:00:54] 2025-12-13 22:00:53,791 | INFO     | .. there are 3 such processes running
[2025-12-13 17:00:54] 2025-12-13 22:00:53,792 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:00:54] 2025-12-13 22:00:53,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:00:54] 2025-12-13 22:00:53,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:00:54] 2025-12-13 22:00:53,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:00:54] 2025-12-13 22:00:53,793 | INFO     | [monitor] control thread has ended
[2025-12-13 17:00:54] 2025-12-13 22:00:53,902 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:00:54] 2025-12-13 22:00:53,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:00:54] 2025-12-13 22:00:53,906 [wrapper] pilotpid: 3849
[2025-12-13 17:00:54] 2025-12-13 22:00:53,908 [wrapper] Pilot exit status: 0
[2025-12-13 17:00:54] 2025-12-13 22:00:53,917 [wrapper] pandaids: 6929300627
[2025-12-13 17:00:54] 2025-12-13 22:00:53,951 [wrapper] cleanup supervisor_pilot 31988 3850
[2025-12-13 17:00:54] 2025-12-13 22:00:53,953 [wrapper] Test setup, not cleaning
[2025-12-13 17:00:54] 2025-12-13 22:00:53,955 [wrapper] apfmon messages muted
[2025-12-13 17:00:54] 2025-12-13 22:00:53,957 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:00:54] 2025-12-13 22:00:53,959 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:00:54]  *** Error codes and diagnostics ***
[2025-12-13 17:00:54]     "exeErrorCode": 0,
[2025-12-13 17:00:54]     "exeErrorDiag": "",
[2025-12-13 17:00:54]     "pilotErrorCode": 0,
[2025-12-13 17:00:54]     "pilotErrorDiag": "",
[2025-12-13 17:00:54]  *** Listing of results directory ***
[2025-12-13 17:00:54] total 444876
[2025-12-13 17:00:54] -rwx------ 1 boincer umatlas     36322 Dec 13 06:39 runpilot2-wrapper.sh
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:43 pilot3.tar.gz
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:43 queuedata.json
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas       100 Dec 13 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:00:54] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 12:41 run_atlas
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas       105 Dec 13 12:41 job.xml
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas 223792650 Dec 13 12:41 EVNT.47898761._000199.pool.root.1
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:41 start_atlas.sh
[2025-12-13 17:00:54] drwxrwx--x 2 boincer umatlas      4096 Dec 13 12:41 shared
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas    592393 Dec 13 12:41 input.tar.gz
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas         0 Dec 13 12:41 boinc_lockfile
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas      2504 Dec 13 12:41 pandaJob.out
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas        57 Dec 13 12:41 setup.sh.local
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas    991736 Dec 13 12:41 agis_schedconf.cvmfs.json
[2025-12-13 17:00:54] drwx------ 5 boincer umatlas      4096 Dec 13 12:41 pilot3
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas 222580048 Dec 13 16:59 HITS.47898763._003084.pool.root.1
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas       532 Dec 13 16:59 boinc_task_state.xml
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas      1055 Dec 13 17:00 memory_monitor_summary.json
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas   1516240 Dec 13 17:00 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas    476791 Dec 13 17:00 log.47898763._003084.job.log.tgz.1
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas      7855 Dec 13 17:00 heartbeat.json
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 17:00 init_data.xml
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 17:00 boinc_mmap_file
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas        29 Dec 13 17:00 wrapper_checkpoint.txt
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas        95 Dec 13 17:00 pilot_heartbeat.json
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas       819 Dec 13 17:00 pilotlog.txt
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas   2157315 Dec 13 17:00 log.47898763._003084.job.log.1
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas       357 Dec 13 17:00 output.list
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas       620 Dec 13 17:00 runtime_log
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas   2652160 Dec 13 17:00 result.tar.gz
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 17:00 runtime_log.err
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas       663 Dec 13 17:00 df2KDmL9co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4RTKDmNMoKlm.diag
[2025-12-13 17:00:54] -rw-r--r-- 1 boincer umatlas     21134 Dec 13 17:00 stderr.txt
[2025-12-13 17:00:54] HITS file was successfully produced:
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas 222580048 Dec 13 16:59 shared/HITS.pool.root.1
[2025-12-13 17:00:54]  *** Contents of shared directory: ***
[2025-12-13 17:00:54] total 439104
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas 223792650 Dec 13 12:41 ATLAS.root_0
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:41 start_atlas.sh
[2025-12-13 17:00:54] -rw-r--r-- 2 boincer umatlas    592393 Dec 13 12:41 input.tar.gz
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas 222580048 Dec 13 16:59 HITS.pool.root.1
[2025-12-13 17:00:54] -rw------- 1 boincer umatlas   2652160 Dec 13 17:00 result.tar.gz
17:00:55 (32471): run_atlas exited; CPU time 119179.789928
17:00:55 (32471): called boinc_finish(0)

</stderr_txt>
]]>

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