Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:14 (1624014): wrapper (7.7.26015): starting
09:18:14 (1624014): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 09:18:14] Arguments: --nthreads 8
[2025-12-13 09:18:14] Threads: 8
[2025-12-13 09:18:14] Checking for CVMFS
[2025-12-13 09:18:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:18:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:18:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:18:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:18:17] 2.11.3.0 1652368 18066 214588 153968 1 42 28276817 45568001 11278 130560 0 70898302 99.813 38595011 22888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 09:18:17] CVMFS is ok
[2025-12-13 09:18:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:18:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:18:18] Further information can be found at the LHC@home message board.
[2025-12-13 09:18:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:18:18] Checking for apptainer binary...
[2025-12-13 09:18:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:18:18] Running /usr/bin/apptainer --version
[2025-12-13 09:18:18] apptainer version 1.4.1-1.el9
[2025-12-13 09:18:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:18:19] wns0007.triumf.lcg
[2025-12-13 09:18:19] apptainer works
[2025-12-13 09:18:20] Set ATHENA_PROC_NUMBER=8
[2025-12-13 09:18:20] Set ATHENA_CORE_NUMBER=8
[2025-12-13 09:18:20] Starting ATLAS job with PandaID=6929301148
[2025-12-13 09:18:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 09:28:01]  *** The last 200 lines of the pilot log: ***
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | wrong length of table data, x=[1765646527.0, 1765646588.0, 1765646649.0], y=[2003.0, 233451.0, 465793.0] (must be same and length>=4)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . Timing measurements:
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . get job = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . initial setup = 10 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload setup = 11 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-in = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload execution = 175 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-out = 2 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . log creation = 0 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 09:28:01] 2025-12-13 17:26:47,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929301148/pilotlog.txt
[2025-12-13 09:28:01] 2025-12-13 17:26:48,110 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 09:28:01] - Log from pilotlog.txt -
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929301148/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | extracted standard info from prmon json
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | wrong length of table data, x=[1765646527.0, 1765646588.0, 1765646649.0], y=[2003.0, 233451.0, 465793.0] (must be same and length>=4)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . Timing measurements:
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . get job = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . initial setup = 10 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload setup = 11 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-in = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload execution = 175 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-out = 2 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . log creation = 0 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 09:28:01] 2025-12-13 17:26:47,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929301148/pilotlog.txt
[2025-12-13 09:28:01] 2025-12-13 17:26:48,110 | WARNING  | 
[2025-12-13 09:28:01] [begin log extracts]
[2025-12-13 09:28:01] - Log from pilotlog.txt -
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929301148/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | extracted standard info from prmon json
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 09:28:01] 2025-12-13 17:26:47,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | WARNING  | wrong length of table data, x=[1765646527.0, 1765646588.0, 1765646649.0], y=[2003.0, 233451.0, 465793.0] (must be same and length>=4)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,919 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . Timing measurements:
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . get job = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . initial setup = 10 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload setup = 11 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-in = 1 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . payload execution = 175 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . stage-out = 2 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | . log creation = 0 s
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | ..............................
[2025-12-13 09:28:01] 2025-12-13 17:26:47,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 09:28:01] 2025-12-13 17:26:47,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929301148/pilotlog.txt
[2025-12-13 09:28:01] [end log extracts]
[2025-12-13 09:28:01] 2025-12-13 17:26:48,111 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 09:28:01] 2025-12-13 17:26:48,111 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 09:28:01] 2025-12-13 17:26:48,877 | INFO     | 
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | job summary report
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | --------------------------------------------------
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | PanDA job id: 6929301148
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | task id: 47898763
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 09:24:02,473 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 09:28:01] 2025-12-13 17:26:48,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | pilot state: failed 
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | transexitcode: 65
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | exeerrorcode: 65
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | exitcode: 65
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | cpuconsumptiontime: 19 s
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | nevents: 0
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | neventsw: 0
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | pid: 1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | pgrp: 1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | corecount: 8
[2025-12-13 09:28:01] 2025-12-13 17:26:48,879 | INFO     | event service: False
[2025-12-13 09:28:01] 2025-12-13 17:26:48,880 | INFO     | sizes: {0: 2283124, 1: 2283806, 2: 2283834, 13: 2284005, 24: 2284061, 35: 2284089, 48: 2284507, 59: 2284535, 192: 2307829, 193: 2307805, 195: 2312125, 197: 2312433
[2025-12-13 09:28:01] 2025-12-13 17:26:48,880 | INFO     | --------------------------------------------------
[2025-12-13 09:28:01] 2025-12-13 17:26:48,880 | INFO     | 
[2025-12-13 09:28:01] 2025-12-13 17:26:48,880 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 09:28:01] 2025-12-13 17:26:49,007 | INFO     | time since job start (418s) is within the limit (174528.0s)
[2025-12-13 09:28:01] 2025-12-13 17:26:49,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 09:28:01] 2025-12-13 17:26:49,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 09:28:01] 2025-12-13 17:26:49,210 | INFO     | job 6929301148 has completed (purged errors)
[2025-12-13 09:28:01] 2025-12-13 17:26:49,210 | INFO     | overall cleanup function is called
[2025-12-13 09:28:01] 2025-12-13 17:26:50,235 | INFO     | --- collectZombieJob: --- 10, [1635099]
[2025-12-13 09:28:01] 2025-12-13 17:26:50,235 | INFO     | zombie collector waiting for pid 1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:50,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 09:28:01] 2025-12-13 17:26:50,235 | INFO     | collected zombie processes
[2025-12-13 09:28:01] 2025-12-13 17:26:50,235 | INFO     | will attempt to kill all subprocesses of pid=1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:50,985 | INFO     | PID=1627982 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 09:28:01] 2025-12-13 17:26:50,985 | INFO     | .. there are 33 such processes running
[2025-12-13 09:28:01] 2025-12-13 17:26:50,998 | INFO     | process IDs to be killed: [1635099] (in reverse order)
[2025-12-13 09:28:01] 2025-12-13 17:26:51,657 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 09:28:01] 2025-12-13 17:26:51,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 09:28:01] 2025-12-13 17:26:51,681 | INFO     | did not find any defunct processes belonging to 1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:51,695 | INFO     | did not find any defunct processes belonging to 1635099
[2025-12-13 09:28:01] 2025-12-13 17:26:51,695 | INFO     | ready for new job
[2025-12-13 09:28:01] 2025-12-13 17:26:51,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 09:28:01] 2025-12-13 17:26:51,697 | INFO     | ***************************************
[2025-12-13 09:28:01] 2025-12-13 17:26:51,697 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 09:28:01] 2025-12-13 17:26:51,697 | INFO     | ***************************************
[2025-12-13 09:28:01] 2025-12-13 17:26:51,697 | INFO     | 
[2025-12-13 09:28:01] 2025-12-13 17:26:51,698 | INFO     | architecture information:
[2025-12-13 09:28:01] 2025-12-13 17:26:51,709 | INFO     | executing command: cat /etc/os-release
[2025-12-13 09:28:01] 2025-12-13 17:26:51,872 | INFO     | cat /etc/os-release:
[2025-12-13 09:28:01] NAME="CentOS Linux"
[2025-12-13 09:28:01] VERSION="7 (Core)"
[2025-12-13 09:28:01] ID="centos"
[2025-12-13 09:28:01] ID_LIKE="rhel fedora"
[2025-12-13 09:28:01] VERSION_ID="7"
[2025-12-13 09:28:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 09:28:01] ANSI_COLOR="0;31"
[2025-12-13 09:28:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 09:28:01] HOME_URL="https://www.centos.org/"
[2025-12-13 09:28:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 09:28:01] 
[2025-12-13 09:28:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 09:28:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 09:28:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 09:28:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 09:28:01] 
[2025-12-13 09:28:01] 2025-12-13 17:26:51,872 | INFO     | ***************************************
[2025-12-13 09:28:01] 2025-12-13 17:26:52,376 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 09:28:01] 2025-12-13 17:26:52,590 | INFO     | sufficient remaining disk space (1420147294208 B)
[2025-12-13 09:28:01] 2025-12-13 17:26:52,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 09:28:01] 2025-12-13 17:26:52,590 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 09:28:01] 2025-12-13 17:26:52,590 | INFO     | update_server=False
[2025-12-13 09:28:01] 2025-12-13 17:26:52,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 09:28:01] 2025-12-13 17:26:52,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:28:01] 2025-12-13 17:26:52,591 | INFO     | aborting loop
[2025-12-13 09:28:01] 2025-12-13 17:26:52,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 09:28:01] 2025-12-13 17:26:52,707 | INFO     | all payload control threads have been joined
[2025-12-13 09:28:01] 2025-12-13 17:26:52,875 | INFO     | all data control threads have been joined
[2025-12-13 09:28:01] 2025-12-13 17:26:53,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 09:28:01] 2025-12-13 17:26:53,597 | INFO     | [job] job monitor thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:53,599 | INFO     | [job] retrieve thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:53,686 | INFO     | all job control threads have been joined
[2025-12-13 09:28:01] 2025-12-13 17:26:53,713 | INFO     | [payload] control thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:53,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:28:01] 2025-12-13 17:26:53,881 | INFO     | [data] control thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,148 | INFO     | [job] validate thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,423 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,546 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,546 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,654 | INFO     | [data] copytool_in thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,692 | INFO     | [job] control thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,868 | INFO     | [job] queue monitor thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:54,964 | INFO     | [payload] failed_post thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:55,115 | INFO     | [payload] validate_post thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:55,519 | INFO     | [data] copytool_out thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:26:56,603 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 09:28:01] 2025-12-13 17:27:24,746 | INFO     | PID=1627982 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 09:28:01] 2025-12-13 17:27:24,746 | INFO     | .. there are 33 such processes running
[2025-12-13 09:28:01] 2025-12-13 17:27:24,746 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 09:28:01] 2025-12-13 17:27:24,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 09:28:01] 2025-12-13 17:27:24,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 09:28:01] 2025-12-13 17:27:50,283 | INFO     | [monitor] cgroup control has ended
[2025-12-13 09:28:01] 2025-12-13 17:27:51,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004890830656)>', '<ExcThread(monitor, started 140003829073664)>']
[2025-12-13 09:28:01] 2025-12-13 17:27:51,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 09:28:01] 2025-12-13 17:27:51,909 | INFO     | [monitor] control thread has ended
[2025-12-13 09:28:01] 2025-12-13 17:27:56,914 | INFO     | all workflow threads have been joined
[2025-12-13 09:28:01] 2025-12-13 17:27:56,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 09:28:01] 2025-12-13 17:27:56,914 | INFO     | traces error code: 0
[2025-12-13 09:28:01] 2025-12-13 17:27:56,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 09:28:01] 2025-12-13 17:27:58,350 [wrapper] ==== pilot stdout END ====
[2025-12-13 09:28:01] 2025-12-13 17:27:58,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 09:28:01] 2025-12-13 17:27:58,442 [wrapper] pilotpid: 1627982
[2025-12-13 09:28:01] 2025-12-13 17:27:58,476 [wrapper] Pilot exit status: 0
[2025-12-13 09:28:01] 2025-12-13 17:27:58,671 [wrapper] pandaids: 6929301148
[2025-12-13 09:28:01] 2025-12-13 17:27:59,372 [wrapper] cleanup supervisor_pilot 1627988 1627983
[2025-12-13 09:28:01] 2025-12-13 17:27:59,428 [wrapper] Test setup, not cleaning
[2025-12-13 09:28:01] 2025-12-13 17:27:59,481 [wrapper] apfmon messages muted
[2025-12-13 09:28:01] 2025-12-13 17:27:59,541 [wrapper] ==== wrapper stdout END ====
[2025-12-13 09:28:01] 2025-12-13 17:27:59,601 [wrapper] ==== wrapper stderr END ====
[2025-12-13 09:28:01]  *** Error codes and diagnostics ***
[2025-12-13 09:28:01]     "exeErrorCode": 65,
[2025-12-13 09:28:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 09:28:01]     "pilotErrorCode": 1305,
[2025-12-13 09:28:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 09:28:01]  *** Listing of results directory ***
[2025-12-13 09:28:01] total 224764
[2025-12-13 09:28:01] -rwx------. 1 boinc boinc     36322 Dec 13 03:39 runpilot2-wrapper.sh
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:43 pilot3.tar.gz
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:43 queuedata.json
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc       100 Dec 13 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 09:28:01] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 09:18 run_atlas
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc       105 Dec 13 09:18 job.xml
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc      6445 Dec 13 09:18 init_data.xml
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc 225979082 Dec 13 09:18 EVNT.47898761._000218.pool.root.1
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc     15847 Dec 13 09:18 start_atlas.sh
[2025-12-13 09:28:01] drwxrwx--x. 2 boinc boinc      4096 Dec 13 09:18 shared
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc    592398 Dec 13 09:18 input.tar.gz
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc         0 Dec 13 09:18 boinc_lockfile
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc      2504 Dec 13 09:18 pandaJob.out
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc    991736 Dec 13 09:19 agis_schedconf.cvmfs.json
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc   1516240 Dec 13 09:19 agis_ddmendpoints.agis.ALL.json
[2025-12-13 09:28:01] drwx------. 5 boinc boinc      4096 Dec 13 09:19 pilot3
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc       524 Dec 13 09:24 boinc_task_state.xml
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc       989 Dec 13 09:24 memory_monitor_summary.json
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc     23294 Dec 13 09:24 log.47898763._003570.job.log.tgz.1
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc      8409 Dec 13 09:26 heartbeat.json
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc        95 Dec 13 09:26 pilot_heartbeat.json
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc      4823 Dec 13 09:27 pilotlog.txt
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc      8192 Dec 13 09:27 boinc_mmap_file
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc        23 Dec 13 09:27 wrapper_checkpoint.txt
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc    106201 Dec 13 09:27 log.47898763._003570.job.log.1
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc       188 Dec 13 09:28 output.list
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc       620 Dec 13 09:28 runtime_log
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc    153600 Dec 13 09:28 result.tar.gz
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc      8634 Dec 13 09:28 runtime_log.err
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc       646 Dec 13 09:28 GJ4NDmM9co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoKPKDmFx3HYm.diag
[2025-12-13 09:28:01] -rw-r--r--. 1 boinc boinc     22127 Dec 13 09:28 stderr.txt
[2025-12-13 09:28:01] No HITS result produced
[2025-12-13 09:28:01]  *** Contents of shared directory: ***
[2025-12-13 09:28:01] total 221436
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc 225979082 Dec 13 09:18 ATLAS.root_0
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc     15847 Dec 13 09:18 start_atlas.sh
[2025-12-13 09:28:01] -rw-r--r--. 2 boinc boinc    592398 Dec 13 09:18 input.tar.gz
[2025-12-13 09:28:01] -rw-------. 1 boinc boinc    153600 Dec 13 09:28 result.tar.gz
09:28:02 (1624014): run_atlas exited; CPU time 35.666611
09:28:02 (1624014): called boinc_finish(0)

</stderr_txt>
]]>

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